Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001342 Sechium edule HOM05D000896 ORTHO05D000594 1.8e-75 285.8 141 100.0
ClCG11G011860 Citrullus lanatus HOM05D000896 ORTHO05D000594 5.0e-17 91.7 147 40.8
Sed0016322 Sechium edule HOM05D000896 ORTHO05D000594 2.1e-15 86.3 139 41.7
Sed0019902 Sechium edule HOM05D000896 ORTHO05D000594 2.7e-15 85.9 145 37.2
ClCG01G006230 Citrullus lanatus HOM05D000896 ORTHO05D000594 1.7e-12 76.6 130 36.9
ClCG01G006250 Citrullus lanatus HOM05D000896 ORTHO05D000594 1.7e-12 76.6 130 37.7
MELO3C005256.2 Cucumis melo HOM05D000896 ORTHO05D000594 2.8e-12 75.9 133 39.1
Sed0008121 Sechium edule HOM05D000896 ORTHO05D000594 1.1e-11 73.9 145 33.8
Gohir.D13G231566 Gossypium hirsutum HOM05D000896 ORTHO05D000594 5.9e-10 68.2 125 32.8
ClCG08G015080 Citrullus lanatus HOM05D000896 ORTHO05D000594 7.7e-10 67.8 128 35.2
CsaV3_5G027980 Cucumis sativus L. HOM05D000896 ORTHO05D000594 7.7e-10 67.8 126 34.9
Gohir.D13G231533 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.3e-09 67.0 126 34.1
Gohir.D11G314050 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.7e-09 66.6 125 32.0
Gohir.A13G226166 Gossypium hirsutum HOM05D000896 ORTHO05D000594 2.9e-09 65.9 125 32.0
CsaV3_5G028220 Cucumis sativus L. HOM05D000896 ORTHO05D000594 5.0e-09 65.1 105 36.2
Gohir.A01G161180 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.5e-08 63.5 128 31.2
MELO3C010986.2 Cucumis melo HOM05D000896 ORTHO05D000594 1.9e-08 63.2 139 31.7
Thecc.03G196900 Theobroma cacao HOM05D000896 ORTHO05D000594 1.9e-08 63.2 128 28.9
MELO3C010943.2 Cucumis melo HOM05D000896 ORTHO05D000594 2.5e-08 62.8 137 33.6
Gohir.A02G044702 Gossypium hirsutum HOM05D000896 ORTHO05D000594 2.5e-08 62.8 121 32.2
Gohir.D02G050732 Gossypium hirsutum HOM05D000896 ORTHO05D000594 4.2e-08 62.0 121 32.2
Gorai.005G056000 Gossypium raimondii HOM05D000896 ORTHO05D000594 4.2e-08 62.0 121 32.2
Thecc.03G197000 Theobroma cacao HOM05D000896 ORTHO05D000594 4.2e-08 62.0 129 29.5
ClCG08G015060 Citrullus lanatus HOM05D000896 ORTHO05D000594 7.2e-08 61.2 144 29.9
Gohir.D02G050666 Gossypium hirsutum HOM05D000896 ORTHO05D000594 7.2e-08 61.2 121 32.2
Gohir.D02G053350 Gossypium hirsutum HOM05D000896 ORTHO05D000594 9.4e-08 60.8 121 31.4
Cfa004779 Carpinus fangiana HOM05D000896 ORTHO05D000594 1.2e-07 60.5 134 29.9
Cpa.g.sc3.72 Carica papaya HOM05D000896 ORTHO05D000594 1.6e-07 60.1 132 29.5
CsaV3_5G027950 Cucumis sativus L. HOM05D000896 ORTHO05D000594 1.6e-07 60.1 126 32.5
Manes.09G155401 Manihot esculenta HOM05D000896 ORTHO05D000594 1.6e-07 60.1 123 30.1
Cfa004691 Carpinus fangiana HOM05D000896 ORTHO05D000594 2.1e-07 59.7 138 29.0
CsaV3_2G029240 Cucumis sativus L. HOM05D000896 ORTHO05D000594 2.1e-07 59.7 131 30.5
Gohir.D01G148400 Gossypium hirsutum HOM05D000896 ORTHO05D000594 2.1e-07 59.7 128 30.5
SalBow1G6889 Salvia bowleyana HOM05D000896 ORTHO05D000594 2.1e-07 59.7 153 34.0
Gohir.A02G048201 Gossypium hirsutum HOM05D000896 ORTHO05D000594 2.7e-07 59.3 125 30.4
MELO3C005306.2 Cucumis melo HOM05D000896 ORTHO05D000594 3.6e-07 58.9 126 31.0
MELO3C005283.2 Cucumis melo HOM05D000896 ORTHO05D000594 4.7e-07 58.5 127 31.5
ECA234G1615 Erigeron canadensis HOM05D000896 ORTHO05D000594 4.7e-07 58.5 134 31.3
Cfa004709 Carpinus fangiana HOM05D000896 ORTHO05D000594 6.1e-07 58.2 138 28.3
Cfa002712 Carpinus fangiana HOM05D000896 ORTHO05D000594 8.0e-07 57.8 133 28.6
Cfa016248 Carpinus fangiana HOM05D000896 ORTHO05D000594 8.0e-07 57.8 125 30.4
CsaV3_5G028430 Cucumis sativus L. HOM05D000896 ORTHO05D000594 8.0e-07 57.8 126 31.7
SalBow1G3201 Salvia bowleyana HOM05D000896 ORTHO05D000594 8.0e-07 57.8 153 32.7
Gorai.008G045700 Gossypium raimondii HOM05D000896 ORTHO05D000594 1.0e-06 57.4 128 30.5
Manes.09G146800 Manihot esculenta HOM05D000896 ORTHO05D000594 1.4e-06 57.0 123 30.9
QL03p040295 Quercus lobata HOM05D000896 ORTHO05D000594 1.4e-06 57.0 140 30.0
Peaxi162Scf00177g00063 Petunia axillaris HOM05D000896 ORTHO05D000594 1.8e-06 56.6 114 29.8
Cfa004780 Carpinus fangiana HOM05D000896 ORTHO05D000594 2.3e-06 56.2 133 27.8
Haze_00194 Corylus avellana HOM05D000896 ORTHO05D000594 3.0e-06 55.8 111 31.5
Gohir.A12G043480 Gossypium hirsutum HOM05D000896 ORTHO05D000594 3.0e-06 55.8 128 30.5
Gohir.D12G042950 Gossypium hirsutum HOM05D000896 ORTHO05D000594 4.0e-06 55.5 124 31.5
Peaxi162Scf00493g00048 Petunia axillaris HOM05D000896 ORTHO05D000594 4.0e-06 55.5 127 35.4
QL03p039811 Quercus lobata HOM05D000896 ORTHO05D000594 4.0e-06 55.5 140 30.0
QL03p040404 Quercus lobata HOM05D000896 ORTHO05D000594 4.0e-06 55.5 126 31.7
Cfa004778 Carpinus fangiana HOM05D000896 ORTHO05D000594 5.2e-06 55.1 134 29.1
Cfa004786 Carpinus fangiana HOM05D000896 ORTHO05D000594 5.2e-06 55.1 134 29.1
Gohir.A12G043560 Gossypium hirsutum HOM05D000896 ORTHO05D000594 5.2e-06 55.1 128 30.5
Gohir.A12G043720 Gossypium hirsutum HOM05D000896 ORTHO05D000594 5.2e-06 55.1 128 30.5
Gohir.D07G208050 Gossypium hirsutum HOM05D000896 ORTHO05D000594 5.2e-06 55.1 123 30.9
QL11p027123 Quercus lobata HOM05D000896 ORTHO05D000594 5.2e-06 55.1 139 30.2
Duzib251G0081 Durio zibethinus HOM05D000896 ORTHO05D000594 6.7e-06 54.7 129 27.1
Gohir.D12G043450 Gossypium hirsutum HOM05D000896 ORTHO05D000594 6.7e-06 54.7 124 31.5
Manes.14G006500 Manihot esculenta HOM05D000896 ORTHO05D000594 6.7e-06 54.7 130 29.2
QL03p040822 Quercus lobata HOM05D000896 ORTHO05D000594 6.7e-06 54.7 126 31.7
Cfa002709 Carpinus fangiana HOM05D000896 ORTHO05D000594 8.8e-06 54.3 133 27.8
CsaV3_5G028440 Cucumis sativus L. HOM05D000896 ORTHO05D000594 8.8e-06 54.3 113 30.1
Duzib138G1815 Durio zibethinus HOM05D000896 ORTHO05D000594 8.8e-06 54.3 131 29.8
Gohir.A01G163850 Gossypium hirsutum HOM05D000896 ORTHO05D000594 8.8e-06 54.3 124 30.6
Gohir.A07G201750 Gossypium hirsutum HOM05D000896 ORTHO05D000594 8.8e-06 54.3 120 28.3
QL11p027543 Quercus lobata HOM05D000896 ORTHO05D000594 8.8e-06 54.3 124 28.2


User provided reference genes

Program Settings