Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 1.7e-140 502.7 258 100.0
Sed0001469 Sechium edule HOM05D007314 ORTHO05D003768 1.4e-57 227.3 116 98.3
Sed0011465 Sechium edule HOM05D007314 ORTHO05D003768 1.4e-57 227.3 116 98.3
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.1e-49 199.5 230 49.6
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-46 191.0 198 54.0
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-45 187.6 266 45.9
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 4.1e-41 172.6 232 44.8
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 5.3e-41 172.2 196 49.5
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 4.2e-38 162.5 228 43.0
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 1.8e-36 157.1 230 39.6
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 2.0e-35 153.7 132 59.1
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 6.3e-34 148.7 177 51.4
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-32 143.3 218 40.4
Sed0010248 Sechium edule HOM05D007314 ORTHO05D003768 1.7e-31 140.6 74 98.6
Sed0017732 Sechium edule HOM05D007314 ORTHO05D003768 6.5e-31 138.7 83 88.0
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.2e-29 134.4 220 40.5
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 4.4e-27 125.9 229 34.9
ClCG07G007690 Citrullus lanatus HOM05D000107 ORTHO05D000062 3.5e-24 116.3 92 63.0
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.5e-23 111.7 219 37.9
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 1.9e-22 110.5 232 34.1
FAN08G3223 Fragaria x ananassa HOM05D009091 ORTHO05D003768 1.2e-21 107.8 194 37.6
ClCG02G006040 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.6e-21 107.5 78 70.5
MELO3C029734.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.7e-21 106.7 115 54.8
BolC4t24885H Brassica oleracea HOM05D031530 ORTHO05D023934 3.6e-21 106.3 140 42.9
Sed0028051 Sechium edule HOM05D007314 ORTHO05D010380 1.4e-20 104.4 48 100.0
ClCG11G015990 Citrullus lanatus HOM05D007314 ORTHO05D003768 4.0e-20 102.8 84 64.3
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 4.0e-20 102.8 232 33.6
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.2e-20 102.4 88 62.5
ClCG10G008410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.5e-19 100.9 210 38.6
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.0e-19 100.5 241 33.6
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 4.4e-19 99.4 195 35.9
RcHm_v2.0_Chr4g0433611 Rosa chinensis HOM05D009091 ORTHO05D003768 4.8e-18 95.9 219 30.6
Rhsim01G0043800 Rhododendron simsii HOM05D007314 ORTHO05D003768 8.2e-18 95.1 230 31.3
PSO339G2856 Papaver somniferum HOM05D008526 ORTHO05D010380 7.0e-17 92.0 233 30.0
PSO339G6242 Papaver somniferum HOM05D008526 ORTHO05D010380 7.0e-17 92.0 231 31.2
Rhsim06G0121300 Rhododendron simsii HOM05D007314 ORTHO05D010380 9.1e-17 91.7 94 51.1
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 9.1e-17 91.7 229 30.6
MELO3C027838.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-16 91.3 116 44.8
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 1.2e-16 91.3 194 34.5
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 3.5e-16 89.7 232 28.4
Rhsim04G0152600 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-16 89.7 131 43.5
Aqoxy1G02807 Aquilegia oxysepala HOM05D008321 ORTHO05D003768 4.5e-16 89.4 189 36.0
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 3.8e-15 86.3 232 30.6
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.5e-14 84.3 83 54.2
Oeu048290.1 Olea europaea HOM05D009091 ORTHO05D003768 1.5e-14 84.3 155 35.5
Oeu016711.1 Olea europaea HOM05D023826 ORTHO05D003768 2.5e-14 83.6 173 32.9
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 9.4e-14 81.6 142 35.2
ClCG08G004820 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.6e-13 80.9 216 29.6
Oeu050751.1 Olea europaea HOM05D009091 ORTHO05D003768 1.6e-13 80.9 225 30.2
Oeu029662.1 Olea europaea HOM05D009091 ORTHO05D003768 2.7e-13 80.1 158 34.2
Rhsim05G0198600 Rhododendron simsii HOM05D000030 ORTHO05D003768 3.6e-13 79.7 173 32.9
FvH4_5g18423 Fragaria vesca HOM05D009091 ORTHO05D000062 8.0e-13 78.6 234 28.6
RcHm_v2.0_Chr4g0420561 Rosa chinensis HOM05D009091 ORTHO05D003768 1.0e-12 78.2 192 32.8
FvH4_4g15323 Fragaria vesca HOM05D008321 ORTHO05D010380 1.8e-12 77.4 234 29.5
PSO832G4314 Papaver somniferum HOM05D008526 ORTHO05D010380 4.0e-12 76.3 136 36.8
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 5.2e-12 75.9 163 34.4
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.2e-11 74.7 233 30.9
FvH4_5g37213 Fragaria vesca HOM05D008321 ORTHO05D010380 2.0e-11 73.9 233 30.5
MELO3C032101.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-11 73.6 67 55.2
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 2.6e-11 73.6 214 29.0
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 4.4e-11 72.8 248 28.6
FAN22G1616 Fragaria x ananassa HOM05D009091 ORTHO05D003768 4.4e-11 72.8 155 35.5
CSS0021689 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 2.8e-10 70.1 194 32.5
MELO3C031186.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.8e-10 69.3 79 44.3
MELO3C019328.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-09 67.4 90 48.9
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-09 67.4 75 49.3
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.4e-09 67.0 113 38.1
RcHm_v2.0_Chr3g0496631 Rosa chinensis HOM05D009091 ORTHO05D003768 2.4e-09 67.0 131 32.8
Rhsim01G0098700 Rhododendron simsii HOM05D007314 ORTHO05D010380 3.1e-09 66.6 182 29.7
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 5.4e-09 65.9 94 42.6
Rhsim02G0039900 Rhododendron simsii HOM05D007314 ORTHO05D003768 5.4e-09 65.9 132 35.6
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.0e-09 65.5 54 64.8
RcHm_v2.0_Chr7g0231331 Rosa chinensis HOM05D009091 ORTHO05D003768 7.0e-09 65.5 107 37.4
Atru.chr9.1118 Acer truncatum HOM05D007314 ORTHO05D003768 9.1e-09 65.1 115 35.7
MELO3C033874.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.1e-09 65.1 89 39.3
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-08 64.3 83 44.6
MELO3C027653.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.7e-08 63.5 235 30.2
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 2.7e-08 63.5 126 34.1
MBI13_g31587_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 3.5e-08 63.2 170 30.0
MELO3C029726.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.5e-08 62.8 90 38.9
FvH4_4g10363 Fragaria vesca HOM05D008321 ORTHO05D003768 4.5e-08 62.8 93 39.8
FAN08G2819 Fragaria x ananassa HOM05D008321 ORTHO05D003768 7.7e-08 62.0 160 33.8
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 7.7e-08 62.0 194 29.9
MELO3C028363.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.0e-07 61.6 199 32.7
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.0e-07 61.6 237 24.1
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.0e-07 61.6 237 24.1
MELO3C034299.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.7e-07 60.8 75 45.3
MBI05_g09172_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 2.2e-07 60.5 155 29.7
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 2.9e-07 60.1 65 50.8
Nn4g24072 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.9e-07 60.1 193 28.0
FAN11G2121 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.8e-07 59.7 92 38.0
RcHm_v2.0_Chr1g0357501 Rosa chinensis HOM05D009091 ORTHO05D003768 3.8e-07 59.7 141 32.6
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 5.0e-07 59.3 241 24.9
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.0e-07 59.3 226 25.2
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 5.0e-07 59.3 161 28.6
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.5e-07 58.9 200 24.5
RcHm_v2.0_Chr5g0064791 Rosa chinensis HOM05D007314 ORTHO05D023934 8.5e-07 58.5 62 50.0
Sed0016549 Sechium edule HOM05D007314 ORTHO05D003768 8.5e-07 58.5 196 28.6
Rhsim01G0064900 Rhododendron simsii HOM05D019892 ORTHO05D023103 1.1e-06 58.2 266 25.2
Oeu021350.1 Olea europaea HOM05D023826 ORTHO05D003768 1.9e-06 57.4 91 40.7
HanXRQChr10g0317551 Helianthus annuus HOM05D000616 ORTHO05D000233 2.5e-06 57.0 267 26.6
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.5e-06 57.0 200 27.5
MELO3C032011.2 Cucumis melo HOM05D011747 ORTHO05D014199 3.2e-06 56.6 87 36.8
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 3.2e-06 56.6 225 24.9
MELO3C022824.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.2e-06 56.2 52 59.6
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 4.2e-06 56.2 183 25.1
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.2e-06 56.2 156 25.0
MBI06_g34258_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 5.5e-06 55.8 119 37.0
FAN16G3103 Fragaria x ananassa HOM05D008321 ORTHO05D003768 9.4e-06 55.1 224 22.8


User provided reference genes

Program Settings