Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 2.8e-112 408.7 218 100.0
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 9.6e-52 207.6 216 61.6
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 6.9e-50 201.4 215 59.5
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 2.4e-42 176.4 254 50.8
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 1.3e-37 160.6 111 73.0
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 3.9e-37 159.1 220 47.3
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 1.1e-36 157.5 113 71.7
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 1.1e-36 157.5 113 71.7
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 3.3e-36 156.0 112 74.1
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 4.3e-36 155.6 206 49.5
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.3e-35 154.1 212 48.6
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 2.8e-35 152.9 187 51.3
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 4.8e-35 152.1 197 50.3
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 4.8e-35 152.1 212 48.6
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 6.3e-35 151.8 131 64.9
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 6.3e-35 151.8 159 57.2
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 8.2e-35 151.4 150 58.0
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 1.1e-34 151.0 192 50.0
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 5.3e-34 148.7 176 51.1
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 6.9e-34 148.3 191 48.7
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 1.5e-33 147.1 217 46.5
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 1.5e-33 147.1 162 54.9
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 2.0e-33 146.7 214 48.1
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 2.0e-33 146.7 112 69.6
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 2.6e-33 146.4 110 70.9
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 3.4e-33 146.0 124 65.3
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 7.7e-33 144.8 173 52.6
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 1.3e-32 144.1 164 53.7
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 2.2e-32 143.3 164 53.0
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 2.2e-32 143.3 143 58.7
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 2.9e-32 142.9 141 58.2
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 2.9e-32 142.9 212 47.2
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 5.0e-32 142.1 164 54.3
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 6.5e-32 141.7 170 54.7
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 1.9e-31 140.2 132 61.4
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 5.5e-31 138.7 143 58.7
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 5.5e-31 138.7 139 59.0
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 5.5e-31 138.7 155 51.6
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 7.2e-31 138.3 146 56.2
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 9.4e-31 137.9 163 52.8
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 9.4e-31 137.9 163 52.8
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 9.4e-31 137.9 132 59.1
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 2.1e-30 136.7 165 51.5
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 2.1e-30 136.7 130 60.8
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 3.6e-30 136.0 155 51.6
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 4.6e-30 135.6 188 48.4
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 6.1e-30 135.2 158 51.3
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 6.1e-30 135.2 169 50.9
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 1.0e-29 134.4 134 62.7
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 1.4e-29 134.0 182 47.3
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.8e-29 133.7 160 51.9
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 1.8e-29 133.7 160 51.9
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.8e-29 133.7 131 57.3
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 1.8e-29 133.7 136 56.6
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 2.3e-29 133.3 202 44.6
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 3.0e-29 132.9 131 56.5
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 3.9e-29 132.5 154 53.2
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 8.8e-29 131.3 176 46.6
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 1.1e-28 131.0 164 52.4
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 2.0e-28 130.2 168 47.6
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 3.3e-28 129.4 131 56.5
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 4.4e-28 129.0 170 48.8
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 4.4e-28 129.0 158 50.0
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 5.7e-28 128.6 167 50.3
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 5.7e-28 128.6 133 55.6
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 9.7e-28 127.9 206 43.7
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 1.3e-27 127.5 176 46.0
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 1.7e-27 127.1 130 52.3
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 2.8e-27 126.3 153 51.0
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 3.7e-27 125.9 141 54.6
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 1.8e-26 123.6 178 44.4
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 2.4e-26 123.2 114 61.4
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 3.1e-26 122.9 184 46.7
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 5.3e-26 122.1 107 58.9
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 9.1e-26 121.3 146 52.1
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 2.0e-25 120.2 147 53.7
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 4.5e-25 119.0 108 57.4
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 2.5e-23 113.2 107 57.9
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 2.7e-22 109.8 157 43.9
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 1.8e-21 107.1 190 41.6
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 5.2e-21 105.5 94 58.5
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 1.7e-19 100.5 120 50.0
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 4.1e-18 95.9 139 46.0
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 5.3e-18 95.5 189 39.2
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 7.0e-18 95.1 171 40.4
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 2.6e-17 93.2 170 41.2
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 3.5e-17 92.8 205 38.5
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 1.7e-16 90.5 192 35.9
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 1.9e-15 87.0 148 37.8
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 7.2e-15 85.1 138 44.2
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 7.2e-15 85.1 67 61.2
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 3.6e-14 82.8 107 43.9
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 1.8e-13 80.5 135 45.2
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 5.7e-12 75.5 196 35.2
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 9.7e-12 74.7 152 36.8
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 4.8e-11 72.4 157 36.9
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 8.2e-11 71.6 110 39.1
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 5.3e-10 68.9 130 41.5


User provided reference genes

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