Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000963 Sechium edule HOM05D000533 ORTHO05D010350 5.4e-41 170.6 91 100.0
PGR111G0065 Punica granatum HOM05D000533 ORTHO05D010350 9.9e-35 149.8 91 86.8
CAN.G1470.7 Capsicum annuum HOM05D000533 ORTHO05D010350 2.7e-32 141.7 91 83.5
CAN.G965.2 Capsicum annuum HOM05D000533 ORTHO05D010350 2.7e-32 141.7 91 83.5
LjContig00318g0021062 Lotus japonicus HOM05D000533 ORTHO05D010350 2.7e-32 141.7 91 82.4
LjContig00319g0004235 Lotus japonicus HOM05D000533 ORTHO05D010350 2.7e-32 141.7 91 82.4
RcHm_v2.0_Chr3g0470821 Rosa chinensis HOM05D000533 ORTHO05D010350 4.6e-32 141.0 91 80.2
Gohir.D11G334200 Gossypium hirsutum HOM05D000533 ORTHO05D010350 7.9e-32 140.2 91 81.3
Potri.012G027700 Populus trichocarpa HOM05D000533 ORTHO05D010350 7.9e-32 140.2 91 80.2
PGSC0003DMG400029905 Solanum tuberosum HOM05D000533 ORTHO05D010350 1.8e-31 139.0 91 82.4
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 3.9e-31 137.9 91 81.3
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 3.9e-31 137.9 91 81.3
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 3.9e-31 137.9 91 81.3
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 3.9e-31 137.9 91 81.3
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 3.9e-31 137.9 91 81.3
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 3.9e-31 137.9 91 81.3
Gohir.A01G140394 Gossypium hirsutum HOM05D000533 ORTHO05D010350 5.1e-31 137.5 89 82.0
Oeu058352.1 Olea europaea HOM05D000533 ORTHO05D010350 5.1e-31 137.5 91 79.1
Nn1g08630 Nelumbo nucifera HOM05D000533 ORTHO05D010350 3.3e-30 134.8 91 81.3
Gohir.A04G053052 Gossypium hirsutum HOM05D000533 ORTHO05D010350 5.6e-30 134.0 88 80.7
CARHR282480 Cardamine hirsuta HOM05D000533 ORTHO05D010350 9.6e-30 133.3 91 78.0
DCAR_032543 Daucus carota HOM05D000533 ORTHO05D010350 1.3e-29 132.9 88 76.1
Eucgr.C01838 Eucalyptus grandis HOM05D000533 ORTHO05D010350 1.3e-29 132.9 84 84.5
BolC7t43859H Brassica oleracea HOM05D000533 ORTHO05D010350 4.8e-29 131.0 91 76.9
BolC2t10602H Brassica oleracea HOM05D000533 ORTHO05D010350 8.2e-29 130.2 91 76.9
BolSC29t60511H Brassica oleracea HOM05D000533 ORTHO05D010350 8.2e-29 130.2 91 76.9
BolSC35t60709H Brassica oleracea HOM05D000533 ORTHO05D010350 8.2e-29 130.2 91 76.9
BolSC37t60798H Brassica oleracea HOM05D000533 ORTHO05D010350 8.2e-29 130.2 91 76.9
BraSC138t45530Z Brassica rapa HOM05D000533 ORTHO05D010350 8.2e-29 130.2 91 76.9
BraSC143t45655Z Brassica rapa HOM05D000533 ORTHO05D010350 8.2e-29 130.2 91 76.9
BraSC25t45915Z Brassica rapa HOM05D000533 ORTHO05D010350 8.2e-29 130.2 91 76.9
BraSC59t46555Z Brassica rapa HOM05D000533 ORTHO05D010350 8.2e-29 130.2 91 76.9
BolSC35t60687H Brassica oleracea HOM05D000533 ORTHO05D010350 1.1e-28 129.8 91 76.9
Lalb_Chr07g0191831 Lupinus albus HOM05D000533 ORTHO05D010350 1.1e-28 129.8 92 77.2
ATCG01120 Arabidopsis thaliana HOM05D000533 ORTHO05D010350 3.1e-28 128.3 91 75.8
Lalb_Chr15g0080711 Lupinus albus HOM05D000533 ORTHO05D010350 4.0e-28 127.9 92 76.1
Lalb_Chr20g0108591 Lupinus albus HOM05D000533 ORTHO05D010350 9.0e-28 126.7 92 76.1
Medtr4g006090 Medicago truncatula HOM05D000533 ORTHO05D010350 2.0e-27 125.6 92 76.1
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.8e-27 124.0 88 72.7
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.8e-27 124.0 88 72.7
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.8e-27 124.0 88 72.7
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.8e-27 124.0 88 72.7
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.8e-27 124.0 88 72.7
Gohir.1Z049594 Gossypium hirsutum HOM05D000533 ORTHO05D010350 7.6e-27 123.6 79 81.0
Gohir.1Z050566 Gossypium hirsutum HOM05D000533 ORTHO05D010350 7.6e-27 123.6 79 81.0
Medtr6g042190 Medicago truncatula HOM05D000533 ORTHO05D010350 1.0e-26 123.2 92 75.0
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.2e-26 122.1 86 73.3
Gohir.A13G086380 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.8e-26 121.3 79 79.7
MD12G1237700 Malus domestica HOM05D000533 ORTHO05D010350 3.8e-26 121.3 83 74.7
MD09G1289300 Malus domestica HOM05D000533 ORTHO05D010350 8.4e-26 120.2 84 75.0
Gorai.013G128500 Gossypium raimondii HOM05D000533 ORTHO05D010350 2.5e-25 118.6 79 79.7
Gohir.D06G106350 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.2e-25 118.2 84 73.8
Lalb_Chr03g0030911 Lupinus albus HOM05D000533 ORTHO05D010350 4.2e-25 117.9 82 78.0
Peaxi162Scf00030g02115 Petunia axillaris HOM05D000533 ORTHO05D010350 5.5e-25 117.5 139 54.7
Gorai.006G055100 Gossypium raimondii HOM05D000533 ORTHO05D010350 1.2e-24 116.3 79 78.5
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 1.6e-24 115.9 86 70.9
SGA_v2.0_scaffold150G36658 Striga asiatica HOM05D000533 ORTHO05D010350 4.6e-24 114.4 82 69.5
Gohir.D13G114450 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.8e-23 112.5 79 75.9
Medtr0002s0210 Medicago truncatula HOM05D000533 ORTHO05D010350 1.8e-23 112.5 75 73.3
Gohir.D11G237260 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.3e-23 112.1 77 76.6
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 1.5e-22 109.4 72 81.9
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 1.3e-21 106.3 73 74.0
BolSC49t61148H Brassica oleracea HOM05D000533 ORTHO05D010350 3.7e-21 104.8 75 74.7
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 8.2e-21 103.6 61 86.9
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 1.1e-20 103.2 62 87.1
Gorai.011G221100 Gossypium raimondii HOM05D000533 ORTHO05D010350 6.9e-20 100.5 71 71.8
BolC9t56911H Brassica oleracea HOM05D000533 ORTHO05D010350 2.6e-19 98.6 70 75.7
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 7.6e-19 97.1 61 85.2
MD08G1073600 Malus domestica HOM05D000533 ORTHO05D010350 1.0e-18 96.7 69 71.0
BolSC29t60551H Brassica oleracea HOM05D000533 ORTHO05D010350 1.3e-18 96.3 59 83.1
HanXRQChr17g0560431 Helianthus annuus HOM05D000533 ORTHO05D010350 6.5e-18 94.0 67 77.6
BolC5t34052H Brassica oleracea HOM05D000533 ORTHO05D010350 1.4e-17 92.8 56 85.7
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 1.9e-17 92.4 65 76.9
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 2.5e-17 92.0 58 81.0
BolSC45t60904H Brassica oleracea HOM05D000533 ORTHO05D010350 1.6e-16 89.4 68 72.1
Hund03919 Selenicereus undatus HOM05D000533 ORTHO05D010350 3.3e-14 81.6 69 65.2
BolSC44t60827H Brassica oleracea HOM05D000533 ORTHO05D010350 4.3e-14 81.3 73 63.0
Phvul.001G058350 Phaseolus vulgaris HOM05D000533 ORTHO05D010350 1.4e-12 76.3 54 74.1
MD12G1214000 Malus domestica HOM05D000533 ORTHO05D010350 6.9e-12 73.9 52 67.3
HanXRQChr00c0690g0576771 Helianthus annuus HOM05D000533 ORTHO05D010350 9.1e-12 73.6 65 66.2
MD12G1021800 Malus domestica HOM05D000533 ORTHO05D010350 1.7e-10 69.3 45 80.0
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 2.9e-10 68.6 61 65.6
CBR_g28520 Chara braunii HOM05D003936 ORTHO05D004747 7.9e-08 60.5 74 44.6
AagrBONN_evm.TU.Sc2ySwM_368.3374 Anthoceros agrestis HOM05D003936 ORTHO05D004747 3.0e-07 58.5 71 42.3
MCO09G555 Micromonas commoda HOM05D000533 ORTHO05D010350 3.0e-07 58.5 66 43.9
Mapoly0065s0028 Marchantia polymorpha HOM05D003936 ORTHO05D004747 6.7e-07 57.4 68 41.2


User provided reference genes

Program Settings