Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 8.0e-68 260.4 140 100.0
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 8.6e-54 213.8 150 79.3
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 1.8e-51 206.1 147 78.2
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 2.3e-51 205.7 146 76.7
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 4.0e-51 204.9 146 76.7
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 7.3e-45 184.1 147 70.1
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 4.4e-42 174.9 149 65.1
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 7.6e-42 174.1 149 64.4
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 2.2e-41 172.6 146 67.8
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 2.9e-41 172.2 149 64.4
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 4.2e-40 168.3 146 64.4
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 1.3e-38 163.3 139 67.6
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 1.7e-38 162.9 156 62.8
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 3.0e-38 162.2 133 63.9
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 3.9e-38 161.8 141 65.2
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 5.1e-38 161.4 136 66.9
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 6.6e-38 161.0 144 63.2
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 1.1e-37 160.2 146 61.0
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 1.5e-37 159.8 145 61.4
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 4.3e-37 158.3 134 64.9
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 9.6e-37 157.1 141 61.0
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 9.6e-37 157.1 143 65.7
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 1.6e-36 156.4 146 62.3
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 1.6e-36 156.4 134 67.2
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 1.6e-36 156.4 135 64.4
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.6e-36 156.4 142 64.1
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 2.1e-36 156.0 134 64.2
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 2.1e-36 156.0 132 62.1
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 2.8e-36 155.6 133 63.9
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 3.6e-36 155.2 150 60.0
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 4.8e-36 154.8 133 60.9
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 6.2e-36 154.5 141 59.6
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 6.2e-36 154.5 141 59.6
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 6.2e-36 154.5 133 66.2
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 6.2e-36 154.5 133 62.4
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 6.2e-36 154.5 133 62.4
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 8.1e-36 154.1 141 64.5
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 8.1e-36 154.1 146 63.0
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 1.4e-35 153.3 156 57.7
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 2.4e-35 152.5 132 65.2
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 2.4e-35 152.5 133 64.7
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 4.0e-35 151.8 134 64.9
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 4.0e-35 151.8 134 64.9
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 4.0e-35 151.8 132 61.4
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 4.0e-35 151.8 136 63.2
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 4.0e-35 151.8 142 60.6
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 5.3e-35 151.4 136 62.5
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 5.3e-35 151.4 142 63.4
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 5.3e-35 151.4 133 61.7
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 5.3e-35 151.4 147 57.8
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 5.3e-35 151.4 132 61.4
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 6.9e-35 151.0 134 64.2
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 6.9e-35 151.0 132 65.9
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 6.9e-35 151.0 142 62.0
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 6.9e-35 151.0 142 62.0
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 9.0e-35 150.6 131 63.4
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 9.0e-35 150.6 133 59.4
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 1.2e-34 150.2 144 59.0
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 1.5e-34 149.8 131 63.4
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 1.5e-34 149.8 139 59.0
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 2.6e-34 149.1 133 63.2
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 2.6e-34 149.1 133 63.2
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 3.4e-34 148.7 139 65.5
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 5.8e-34 147.9 138 63.0
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 9.9e-34 147.1 146 56.8
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.3e-33 146.7 134 62.7
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 1.7e-33 146.4 134 59.7
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 3.8e-33 145.2 139 55.4
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 3.8e-33 145.2 146 60.3
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 4.9e-33 144.8 143 55.2
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 8.4e-33 144.1 127 63.0
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 1.4e-32 143.3 135 60.0
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.9e-32 142.9 122 68.0
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 3.2e-32 142.1 147 57.8
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 3.2e-32 142.1 136 58.1
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 3.2e-32 142.1 136 58.1
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 4.2e-32 141.7 133 64.7
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 7.1e-32 141.0 142 59.9
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 9.3e-32 140.6 148 56.1
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 9.3e-32 140.6 155 56.1
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 1.2e-31 140.2 131 59.5
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 2.7e-31 139.0 133 56.4
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 3.5e-31 138.7 121 65.3
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 3.5e-31 138.7 131 63.4
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 4.6e-31 138.3 130 56.9
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 7.9e-31 137.5 130 57.7
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 1.0e-30 137.1 146 56.8
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.8e-30 136.3 121 66.9
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 1.8e-30 136.3 146 54.8
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 3.9e-30 135.2 147 53.7
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 5.1e-30 134.8 145 56.6
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 8.7e-30 134.0 134 57.5
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 1.1e-29 133.7 132 56.8
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 1.9e-29 132.9 132 57.6
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 3.3e-29 132.1 131 56.5
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 9.6e-29 130.6 131 55.0
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 1.3e-28 130.2 146 50.7
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 1.6e-28 129.8 131 55.0
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 4.8e-28 128.3 137 56.2
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 4.8e-28 128.3 131 58.0
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 1.4e-27 126.7 151 52.3
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 6.9e-27 124.4 130 52.3
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 2.0e-26 122.9 131 51.9
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 2.6e-26 122.5 138 52.2
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 4.5e-26 121.7 131 51.9
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 9.9e-26 120.6 142 55.6
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 2.9e-25 119.0 128 53.9
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 2.9e-25 119.0 128 53.9
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 2.9e-25 119.0 128 53.9
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 2.9e-25 119.0 128 53.9
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 1.1e-24 117.1 128 53.1
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 1.1e-24 117.1 75 81.3
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 3.2e-24 115.5 142 48.6
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 2.1e-23 112.8 73 80.8
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 3.5e-23 112.1 106 59.4
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 7.9e-23 110.9 142 49.3
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 1.3e-22 110.2 146 47.9
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 8.1e-20 100.9 123 52.8
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 2.0e-18 96.3 126 48.4
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 1.0e-17 94.0 127 44.9
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.0e-17 94.0 132 41.7
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 1.0e-17 94.0 142 43.0
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 1.7e-17 93.2 131 46.6
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 1.1e-16 90.5 110 47.3
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 1.9e-13 79.7 76 56.6
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 2.1e-12 76.3 100 47.0
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 1.3e-09 67.0 131 35.1
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.9e-08 63.2 45 57.8
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 2.1e-07 59.7 92 42.4
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 6.7e-06 54.7 62 43.5


User provided reference genes

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