Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000945 Sechium edule HOM05D007421 ORTHO05D009203 5.3e-193 677.6 354 100.0
ClCG09G021300 Citrullus lanatus HOM05D007421 ORTHO05D009203 4.9e-106 388.7 365 59.5
CsaV3_7G012710 Cucumis sativus L. HOM05D007421 ORTHO05D009203 4.3e-102 375.6 364 58.8
Actinidia38971 Actinidia chinensis HOM05D003963 ORTHO05D004558 5.2e-55 219.2 370 40.8
CSS0030012 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 1.2e-51 208.0 356 41.6
Dinv24220 Davidia involucrata HOM05D007421 ORTHO05D009203 1.6e-51 207.6 373 41.0
CSS0048527 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 2.7e-51 206.8 356 41.6
Ca_18335_v3 Cicer arietinum L. HOM05D007421 ORTHO05D009203 8.9e-47 191.8 348 42.5
CiPaw.06G151100 Carya illinoinensis HOM05D007421 ORTHO05D009203 1.9e-44 184.1 355 38.9
MELO3C024933.2 Cucumis melo HOM05D007421 ORTHO05D009203 1.9e-44 184.1 180 57.8
Actinidia00249 Actinidia chinensis HOM05D007421 ORTHO05D009203 1.7e-42 177.6 293 39.9
Lj4g0022412 Lotus japonicus HOM05D007421 ORTHO05D009203 6.6e-42 175.6 352 39.2
Nn5g28883 Nelumbo nucifera HOM05D007421 ORTHO05D009203 3.3e-41 173.3 328 38.4
TPR.G10446 Trifolium pratense HOM05D007421 ORTHO05D009203 3.6e-40 169.9 364 40.1
Rhsim11G0134600 Rhododendron simsii HOM05D007421 ORTHO05D009203 4.7e-40 169.5 403 38.7
TAR628G0675 Trochodendron aralioides HOM05D007421 ORTHO05D009203 7.5e-38 162.2 305 37.4
vmacro01809 Vaccinium macrocarpon HOM05D007421 ORTHO05D009203 1.7e-37 161.0 387 34.9
Manes.11G148500 Manihot esculenta HOM05D007421 ORTHO05D009203 1.3e-34 151.4 321 38.6
Medtr4g094292 Medicago truncatula HOM05D007421 ORTHO05D009203 4.7e-32 142.9 389 34.4
Cfa005578 Carpinus fangiana HOM05D007421 ORTHO05D009203 1.1e-31 141.7 229 38.9
CAN.G1034.36 Capsicum annuum HOM05D007421 ORTHO05D009203 8.9e-31 138.7 336 36.0
Cc02_g21850 Coffea canephora HOM05D007421 ORTHO05D009203 8.9e-31 138.7 367 30.8
PGSC0003DMG400024171 Solanum tuberosum HOM05D007421 ORTHO05D009203 1.2e-30 138.3 360 33.6
Psat7g097480 Pisum sativum HOM05D007421 ORTHO05D009203 3.4e-30 136.7 367 35.4
TWI59G0537 Tripterygium wilfordii HOM05D007421 ORTHO05D009203 4.4e-30 136.3 316 35.8
Nitab4.5_0011639g0020 Nicotiana tabacum HOM05D007421 ORTHO05D009203 7.5e-30 135.6 358 35.8
Glyma.08G075000 Glycine max HOM05D007421 ORTHO05D009203 1.3e-29 134.8 351 34.2
Phvul.002G206600 Phaseolus vulgaris HOM05D007421 ORTHO05D009203 2.2e-29 134.0 336 36.6
Solyc10g047040.3 Solanum lycopersicum HOM05D007421 ORTHO05D009203 2.9e-29 133.7 366 32.8
Sopen10g016990 Solanum pennellii HOM05D007421 ORTHO05D009203 3.7e-29 133.3 366 32.5
Nitab4.5_0000078g0170 Nicotiana tabacum HOM05D007421 ORTHO05D009203 8.3e-29 132.1 359 34.8
QL11p019404 Quercus lobata HOM05D007421 ORTHO05D009203 8.3e-29 132.1 247 42.1
Glyma.05G120200 Glycine max HOM05D007421 ORTHO05D009203 4.1e-28 129.8 360 33.9
VMungo0251G1640 Vigna mungo HOM05D007421 ORTHO05D009203 2.1e-27 127.5 347 34.9
Nitab4.5_0004176g0040 Nicotiana tabacum HOM05D007421 ORTHO05D009203 6.0e-27 125.9 359 34.0
Haze_09992 Corylus avellana HOM05D003963 ORTHO05D004558 1.3e-26 124.8 220 39.5
Peaxi162Scf00003g03742 Petunia axillaris HOM05D007421 ORTHO05D009203 1.7e-26 124.4 321 32.7
DCAR_029217 Daucus carota HOM05D007421 ORTHO05D009203 8.6e-26 122.1 278 34.2
Aqoxy5G02013 Aquilegia oxysepala HOM05D007421 ORTHO05D009203 1.9e-25 120.9 320 32.2
Sc08g0004770 Simmondsia chinensis HOM05D007421 ORTHO05D009203 3.3e-25 120.2 363 33.3
Prupe.1G559900 Prunus persica HOM05D007421 ORTHO05D009203 7.3e-25 119.0 324 35.2
Cpa.g.sc0.12 Carica papaya HOM05D007421 ORTHO05D009203 1.2e-24 118.2 402 29.6
Sabra05G0133500 Salix brachista HOM05D007421 ORTHO05D009203 1.6e-24 117.9 337 30.3
CDE02G3538 Ceratophyllum demersum HOM05D007421 ORTHO05D009203 2.8e-24 117.1 208 36.5
Gorai.013G063400 Gossypium raimondii HOM05D007421 ORTHO05D009203 3.6e-24 116.7 230 36.5
MBI07_g32548_MAGBIO Magnolia biondii HOM05D007421 ORTHO05D009203 3.6e-24 116.7 119 58.8
Gohir.A13G065600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 4.7e-24 116.3 230 36.5
EL10Ac8g19356 Beta vulgaris HOM05D007421 ORTHO05D009203 5.2e-23 112.8 252 34.5
Oeu000232.1 Olea europaea HOM05D007421 ORTHO05D009203 5.2e-23 112.8 300 35.0
Potri.005G176900 Populus trichocarpa HOM05D007421 ORTHO05D009203 1.5e-22 111.3 279 34.1
Gohir.A03G171600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 2.6e-22 110.5 288 33.0
CANSAT11G0077 Cannabis sativa HOM05D007421 ORTHO05D009203 1.7e-21 107.8 363 30.9
Haze_10776 Corylus avellana HOM05D007421 ORTHO05D009203 4.9e-21 106.3 234 34.6
HPP92_013365 Vanilla planifolia HOM05D007421 ORTHO05D009203 1.4e-20 104.8 250 35.2
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 2.4e-20 104.0 294 30.3
Gorai.005G217800 Gossypium raimondii HOM05D007421 ORTHO05D009203 5.4e-20 102.8 293 31.1
Gohir.D13G056100 Gossypium hirsutum HOM05D007421 ORTHO05D009203 1.6e-19 101.3 212 34.9
MD08G1222100 Malus domestica HOM05D007421 ORTHO05D009203 2.1e-19 100.9 221 34.8
Thecc.02G143500 Theobroma cacao HOM05D007421 ORTHO05D009203 2.1e-19 100.9 287 32.1
DCAR_001801 Daucus carota HOM05D007421 ORTHO05D009203 7.8e-19 99.0 150 47.3
Lj9C318G13 Lonicera japonica HOM05D007421 ORTHO05D009203 1.0e-18 98.6 168 38.7
ClCG09G021270 Citrullus lanatus HOM05D007421 ORTHO05D009203 1.9e-17 94.4 176 42.6
SGA_v2.0_scaffold332G48944 Striga asiatica HOM05D007421 ORTHO05D009203 2.4e-15 87.4 361 28.3
Lalb_Chr12g0208501 Lupinus albus HOM05D007421 ORTHO05D009203 7.6e-14 82.4 199 36.2
Atru.chr6.906 Acer truncatum HOM05D007421 ORTHO05D009203 9.9e-14 82.0 261 30.3
ECA236G4083 Erigeron canadensis HOM05D007421 ORTHO05D009203 1.7e-13 81.3 242 31.0
Potri.002G084750 Populus trichocarpa HOM05D007421 ORTHO05D009203 2.9e-13 80.5 286 32.2
Eucgr.I02692 Eucalyptus grandis HOM05D007421 ORTHO05D009203 1.1e-12 78.6 237 30.4
ATR0753G155 Amborella trichopoda HOM05D007421 ORTHO05D009203 1.9e-12 77.8 123 38.2
FvH4_5g30620 Fragaria vesca HOM05D007421 ORTHO05D009203 2.4e-12 77.4 236 30.1
Ciclev10003479m.g Citrus clementina HOM05D007421 ORTHO05D009203 5.4e-12 76.3 253 34.0
FAN18G4438 Fragaria x ananassa HOM05D007421 ORTHO05D009203 1.2e-11 75.1 236 30.1
RcHm_v2.0_Chr7g0225501 Rosa chinensis HOM05D007421 ORTHO05D009203 3.0e-10 70.5 262 29.4
Gohir.D02G194950 Gossypium hirsutum HOM05D007421 ORTHO05D009203 5.1e-10 69.7 280 27.1
FAN04G0435 Fragaria x ananassa HOM05D007421 ORTHO05D009203 1.9e-09 67.8 242 29.8
CBR_g30215 Chara braunii HOM05D002710 ORTHO05D009203 9.6e-09 65.5 32 78.1
SEGI_03000 Sequoiadendron giganteum HOM05D007421 ORTHO05D009203 1.6e-08 64.7 226 28.3
SMO172G0209 Selaginella moellendorffii HOM05D004073 ORTHO05D004785 2.8e-08 63.9 32 71.9
SMO198G0058 Selaginella moellendorffii HOM05D002710 ORTHO05D002905 2.8e-08 63.9 32 71.9
RcHm_v2.0_Chr7g0236151 Rosa chinensis HOM05D007421 ORTHO05D009203 6.2e-08 62.8 149 28.9
MCO11G228 Micromonas commoda HOM05D002710 ORTHO05D002905 1.1e-07 62.0 32 68.8
Pp3c2_17030 Physcomitrium patens HOM05D002710 ORTHO05D002905 3.1e-07 60.5 104 30.8
Pp3c1_21370 Physcomitrium patens HOM05D002710 ORTHO05D002905 6.9e-07 59.3 32 65.6
Migut.B00638 Erythranthe guttata HOM05D007421 ORTHO05D009203 9.0e-07 58.9 179 30.2
AagrBONN_evm.TU.Sc2ySwM_368.2304 Anthoceros agrestis HOM05D002710 ORTHO05D002905 2.0e-06 57.8 99 34.3
Prupe.4G263300 Prunus persica HOM05D007421 ORTHO05D009203 2.0e-06 57.8 94 40.4
Cre03.g172800 Chlamydomonas reinhardtii HOM05D002710 ORTHO05D002905 2.6e-06 57.4 31 67.7
RcHm_v2.0_Chr5g0049711 Rosa chinensis HOM05D007421 ORTHO05D009203 5.8e-06 56.2 156 28.2


User provided reference genes

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