Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000927 Sechium edule HOM05D008619 ORTHO05D000090 2.7e-64 248.4 120 100.0
Sed0025187 Sechium edule HOM05D008619 ORTHO05D000090 4.0e-15 85.1 74 60.8
ClCG09G021760 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.6e-11 73.2 52 63.5
Sed0010182 Sechium edule HOM05D008619 ORTHO05D000090 1.7e-10 69.7 51 62.7
Sed0020881 Sechium edule HOM05D008619 ORTHO05D000090 2.9e-10 68.9 53 58.5
CsaV3_7G027920 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.1e-09 67.0 57 57.9
Sed0002057 Sechium edule HOM05D008619 ORTHO05D000090 1.1e-09 67.0 52 59.6
Sed0018285 Sechium edule HOM05D008619 ORTHO05D000090 1.5e-09 66.6 53 58.5
ClCG09G008330 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.9e-09 66.2 52 57.7
CsaV3_7G027240 Cucumis sativus L. HOM05D008619 ORTHO05D000090 7.2e-09 64.3 52 55.8
ClCG00G006240 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.6e-08 63.2 66 47.0
ClCG01G008120 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.6e-08 63.2 66 47.0
Sed0005043 Sechium edule HOM05D008619 ORTHO05D000090 1.6e-08 63.2 52 57.7
Sed0021875 Sechium edule HOM05D008619 ORTHO05D000090 1.6e-08 63.2 49 59.2
Sed0025833 Sechium edule HOM05D008619 ORTHO05D025208 2.1e-08 62.8 70 48.6
MELO3C015722.2 Cucumis melo HOM05D008619 ORTHO05D025208 1.0e-07 60.5 57 50.9
CsaV3_7G027260 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.0e-07 60.5 46 58.7
Sed0014077 Sechium edule HOM05D008619 ORTHO05D000090 1.0e-07 60.5 53 54.7
Actinidia33760 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.8e-07 59.7 53 58.5
MELO3C028898.2 Cucumis melo HOM05D008619 ORTHO05D000090 1.8e-07 59.7 46 56.5
Sed0014525 Sechium edule HOM05D008619 ORTHO05D000090 1.8e-07 59.7 50 54.0
vmacro02633 Vaccinium macrocarpon HOM05D008619 ORTHO05D000090 4.0e-07 58.5 53 52.8
CsaV3_7G027720 Cucumis sativus L. HOM05D008619 ORTHO05D000090 5.2e-07 58.2 49 55.1
Prupe.8G230100 Prunus persica HOM05D008619 ORTHO05D000090 6.8e-07 57.8 51 54.9
RcHm_v2.0_Chr6g0289221 Rosa chinensis HOM05D000162 ORTHO05D000090 1.5e-06 56.6 50 54.0
COL.COLO4_20165 Corchorus olitorius HOM05D000162 ORTHO05D000090 2.0e-06 56.2 63 46.0
Haze_24551 Corylus avellana HOM05D000162 ORTHO05D000090 2.6e-06 55.8 50 54.0
Hma1.2p1_0172F.1_g076330 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 3.4e-06 55.5 59 49.2
MD05G1203800 Malus domestica HOM05D008619 ORTHO05D000090 4.4e-06 55.1 50 54.0
CsaV3_7G027280 Cucumis sativus L. HOM05D008619 ORTHO05D000090 5.7e-06 54.7 49 46.9
COL.COLO4_20322 Corchorus olitorius HOM05D000162 ORTHO05D000090 7.5e-06 54.3 77 37.7
GSVIVG01000757001 Vitis vinifera HOM05D000162 ORTHO05D000090 7.5e-06 54.3 56 51.8
ClCG01G008220 Citrullus lanatus HOM05D008619 ORTHO05D000090 9.8e-06 53.9 65 43.1
COL.COLO4_20303 Corchorus olitorius HOM05D000162 ORTHO05D000090 9.8e-06 53.9 63 46.0


User provided reference genes

Program Settings