Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 1.1e-267 926.4 606 100.0
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 3.0e-95 353.6 773 40.9
Sed0011246 Sechium edule HOM05D006278 ORTHO05D007526 1.3e-93 348.2 583 61.2
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 7.0e-92 342.4 678 46.3
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 4.1e-36 157.1 199 46.2
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 1.6e-35 155.2 255 41.2
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 2.1e-35 154.8 181 49.2
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 7.8e-35 152.9 199 45.7
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 1.7e-34 151.8 393 33.8
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 3.0e-34 151.0 258 39.9
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 3.6e-32 144.1 413 34.4
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 2.4e-31 141.4 250 40.0
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 1.2e-30 139.0 385 33.0
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 2.0e-30 138.3 385 30.4
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 1.7e-29 135.2 404 32.2
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 2.2e-29 134.8 393 32.3
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 8.4e-29 132.9 390 31.5
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 8.4e-29 132.9 390 31.5
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 1.1e-28 132.5 192 43.8
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 1.9e-28 131.7 402 33.6
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 1.9e-28 131.7 412 29.6
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 2.4e-28 131.3 195 41.0
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 3.2e-28 131.0 385 32.7
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 3.2e-28 131.0 396 32.6
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 1.2e-27 129.0 401 30.2
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 2.7e-27 127.9 396 33.3
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 3.5e-27 127.5 441 29.5
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 3.5e-27 127.5 347 32.6
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 4.6e-27 127.1 413 30.0
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 2.3e-26 124.8 392 32.4
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 6.6e-26 123.2 417 30.7
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 6.6e-26 123.2 347 32.3
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 1.1e-25 122.5 297 31.0
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 2.5e-25 121.3 168 44.6
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 4.3e-25 120.6 278 34.9
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 4.3e-25 120.6 252 34.9
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 1.6e-24 118.6 253 37.5
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 2.1e-24 118.2 390 31.3
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 2.1e-24 118.2 405 31.6
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 2.8e-24 117.9 389 31.4
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 2.8e-24 117.9 256 36.3
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 2.8e-24 117.9 172 41.3
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 3.6e-24 117.5 416 30.8
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 4.8e-24 117.1 246 39.4
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 6.2e-24 116.7 249 36.1
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 6.2e-24 116.7 184 40.8
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 6.2e-24 116.7 181 39.8
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 3.1e-23 114.4 331 32.3
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 4.0e-23 114.0 269 35.3
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 4.0e-23 114.0 240 37.9
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 4.0e-23 114.0 413 30.3
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 5.3e-23 113.6 269 34.2
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 9.0e-23 112.8 219 38.4
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 1.2e-22 112.5 215 37.2
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 1.2e-22 112.5 432 28.9
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 1.2e-22 112.5 267 34.5
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 1.5e-22 112.1 215 37.2
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 2.6e-22 111.3 387 29.2
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 5.8e-22 110.2 265 35.5
MELO3C010954.2 Cucumis melo HOM05D006278 ORTHO05D007526 1.3e-21 109.0 124 58.9
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.3e-21 109.0 257 34.6
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 2.2e-21 108.2 251 35.9
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 2.2e-21 108.2 405 30.4
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 2.9e-21 107.8 251 35.9
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 4.9e-21 107.1 382 28.8
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 6.4e-21 106.7 223 35.0
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 8.4e-21 106.3 410 31.2
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 8.4e-21 106.3 247 33.6
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 8.4e-21 106.3 274 32.5
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.9e-20 105.1 415 29.6
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 5.4e-20 103.6 393 32.1
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 7.1e-20 103.2 355 30.7
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 1.2e-19 102.4 287 33.8
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 2.7e-19 101.3 214 36.0
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 3.5e-19 100.9 199 38.2
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 1.3e-18 99.0 422 30.8
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.3e-18 99.0 407 30.5
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 1.8e-18 98.6 379 32.2
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 1.8e-18 98.6 254 32.7
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 1.8e-18 98.6 207 32.9
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 3.0e-18 97.8 391 29.2
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 3.0e-18 97.8 350 30.9
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 1.1e-17 95.9 190 38.9
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.5e-17 95.5 361 30.5
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 2.5e-17 94.7 338 31.1
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 3.3e-17 94.4 426 27.7
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 5.6e-17 93.6 364 29.7
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 1.3e-16 92.4 250 30.0
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 1.6e-16 92.0 209 33.5
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 8.1e-16 89.7 251 31.1
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 1.1e-15 89.4 210 34.8
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 4.0e-15 87.4 268 31.3
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 6.9e-15 86.7 297 31.0
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 3.4e-14 84.3 252 31.7
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 5.8e-14 83.6 216 31.5
Actinidia15341 Actinidia chinensis HOM05D006278 ORTHO05D007526 1.3e-13 82.4 333 31.2
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 1.3e-13 82.4 336 27.7
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 1.3e-13 82.4 136 40.4
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 1.7e-13 82.0 349 27.2
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 3.8e-13 80.9 224 32.6
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 3.8e-13 80.9 363 26.4
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 8.4e-13 79.7 233 27.5
TAR376G0700 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.1e-12 79.3 363 26.2
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 4.2e-12 77.4 369 24.7
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 5.5e-12 77.0 389 28.0
Phvul.009G058700 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 7.1e-12 76.6 357 27.2
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 7.1e-12 76.6 353 25.2
Glyma.06G031201 Glycine max HOM05D006278 ORTHO05D007526 9.3e-12 76.3 330 27.9
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 4.6e-11 73.9 242 29.8
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 1.3e-10 72.4 370 25.4
FAN15G2069 Fragaria x ananassa HOM05D006278 ORTHO05D007526 6.7e-10 70.1 247 30.8
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 1.1e-09 69.3 367 27.8
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 1.5e-09 68.9 356 25.3
Nitab4.5_0003711g0040 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.5e-09 68.9 116 40.5
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 5.6e-09 67.0 277 27.8
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 7.4e-09 66.6 373 24.7
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 5.3e-07 60.5 138 33.3
Medtr7g117980 Medicago truncatula HOM05D004242 ORTHO05D004349 6.9e-07 60.1 116 32.8
TPR.G4684 Trifolium pratense HOM05D004242 ORTHO05D004349 9.0e-07 59.7 113 31.9
Oeu042952.1 Olea europaea HOM05D004242 ORTHO05D004349 1.2e-06 59.3 309 26.9
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 2.0e-06 58.5 281 28.5
PGR031G2923 Punica granatum HOM05D004242 ORTHO05D004349 4.5e-06 57.4 109 33.9


User provided reference genes

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