Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000802 Sechium edule HOM05D008070 ORTHO05D001888 1.1e-96 356.7 181 100.0
Sed0022116 Sechium edule HOM05D008070 ORTHO05D001888 1.9e-24 116.7 138 44.2
Sed0024894 Sechium edule HOM05D008070 ORTHO05D001888 2.4e-24 116.3 130 46.2
CsaV3_5G031330 Cucumis sativus L. HOM05D008070 ORTHO05D001888 1.7e-22 110.2 124 46.8
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 3.0e-22 109.4 137 41.6
MELO3C011973.2 Cucumis melo HOM05D008070 ORTHO05D001888 3.6e-20 102.4 134 42.5
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 2.6e-18 96.3 130 42.3
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 4.4e-18 95.5 127 42.5
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 9.9e-18 94.4 129 39.5
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 2.2e-17 93.2 130 40.8
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 2.2e-17 93.2 131 39.7
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 2.9e-17 92.8 129 38.8
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 1.9e-16 90.1 132 37.9
Manes.12G025200 Manihot esculenta HOM05D008070 ORTHO05D001888 1.2e-15 87.4 131 37.4
BraA02t06717Z Brassica rapa HOM05D008070 ORTHO05D001888 5.6e-13 78.6 137 37.2
BcaC03g15202 Brassica carinata HOM05D008070 ORTHO05D001888 9.6e-13 77.8 137 36.5
C02p27870 Brassica napus HOM05D008070 ORTHO05D001888 9.6e-13 77.8 137 36.5
BolC2t08833H Brassica oleracea HOM05D008070 ORTHO05D001888 9.6e-13 77.8 137 36.5
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 9.6e-13 77.8 126 36.5
Manes.13G026900 Manihot esculenta HOM05D008070 ORTHO05D001888 9.6e-13 77.8 126 35.7
A02p16620 Brassica napus HOM05D008070 ORTHO05D001888 1.6e-12 77.0 137 36.5
Thhalv10019249m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 1.6e-12 77.0 137 35.8
CARHR063750 Cardamine hirsuta HOM05D008070 ORTHO05D001888 2.1e-12 76.6 140 34.3
AL2G29930 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 2.8e-12 76.3 137 35.0
AT1G70540 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 3.6e-12 75.9 137 35.0
Carub.0002s1726 Capsella rubella HOM05D008070 ORTHO05D001888 4.7e-12 75.5 137 35.0
Prupe.1G249100 Prunus persica HOM05D008070 ORTHO05D001888 8.1e-12 74.7 126 38.1
QL03p058723 Quercus lobata HOM05D010056 ORTHO05D001888 8.1e-12 74.7 124 34.7
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 8.1e-12 74.7 132 36.4
Aa31LG4G10410 Aethionema arabicum HOM05D008070 ORTHO05D001888 1.1e-11 74.3 157 33.8
AT1G23350 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 2.4e-11 73.2 143 32.9
CiPaw.06G069400 Carya illinoinensis HOM05D008070 ORTHO05D001888 3.1e-11 72.8 129 32.6
Sp5g25690 Schrenkiella parvula HOM05D008070 ORTHO05D001888 4.0e-11 72.4 137 35.0
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 5.2e-11 72.0 125 35.2
AL1G37150 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 8.9e-11 71.2 143 32.9
THA.LOC104822979 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 1.2e-10 70.9 123 35.0
Cpa.g.sc69.89 Carica papaya HOM05D008070 ORTHO05D001888 1.5e-10 70.5 129 32.6
Atru.chr11.2085 Acer truncatum HOM05D008070 ORTHO05D001888 2.0e-10 70.1 126 34.9
Atru.chr11.2086 Acer truncatum HOM05D008070 ORTHO05D001888 2.0e-10 70.1 126 34.9
CARHR023800 Cardamine hirsuta HOM05D008070 ORTHO05D001888 2.0e-10 70.1 128 35.2
Ciclev10032926m.g Citrus clementina HOM05D008070 ORTHO05D001888 2.6e-10 69.7 125 31.2
BcaB07g32331 Brassica carinata HOM05D008070 ORTHO05D001888 5.8e-10 68.6 129 34.9
TWI36G0098 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 5.8e-10 68.6 130 30.0
BcaC05g26248 Brassica carinata HOM05D008070 ORTHO05D001888 1.7e-09 67.0 129 34.9
C05p22620 Brassica napus HOM05D008070 ORTHO05D001888 1.7e-09 67.0 129 34.9
BolC5t30961H Brassica oleracea HOM05D008070 ORTHO05D001888 1.7e-09 67.0 129 34.9
Sp1g20800 Schrenkiella parvula HOM05D008070 ORTHO05D001888 2.2e-09 66.6 126 33.3
BcaB03g11935 Brassica carinata HOM05D008070 ORTHO05D001888 8.4e-09 64.7 143 30.8
BraA07t29145Z Brassica rapa HOM05D008070 ORTHO05D001888 8.4e-09 64.7 127 33.9
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 8.4e-09 64.7 136 36.0
BcaB03g14151 Brassica carinata HOM05D008070 ORTHO05D001888 1.1e-08 64.3 127 33.1
BcaC06g35034 Brassica carinata HOM05D008070 ORTHO05D001888 1.4e-08 63.9 127 33.1
BolC7t42570H Brassica oleracea HOM05D008070 ORTHO05D001888 1.4e-08 63.9 127 33.1
Aa31LG7G7380 Aethionema arabicum HOM05D008070 ORTHO05D001888 1.9e-08 63.5 128 30.5
BcaC07g39196 Brassica carinata HOM05D008070 ORTHO05D001888 4.2e-08 62.4 142 30.3
BolC8t49825H Brassica oleracea HOM05D008070 ORTHO05D001888 4.2e-08 62.4 142 30.3
Thhalv10008931m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 4.2e-08 62.4 125 31.2
A08p28210 Brassica napus HOM05D008070 ORTHO05D001888 5.4e-08 62.0 142 30.3
BraA08t34752Z Brassica rapa HOM05D008070 ORTHO05D001888 5.4e-08 62.0 142 30.3
COL.COLO4_24233 Corchorus olitorius HOM05D008070 ORTHO05D001888 5.4e-08 62.0 164 28.7
Rhsim04G0235100 Rhododendron simsii HOM05D005742 ORTHO05D001888 1.6e-07 60.5 135 31.9
C08p21860 Brassica napus HOM05D008070 ORTHO05D001888 2.1e-07 60.1 142 29.6
Duzib251G0841 Durio zibethinus HOM05D008070 ORTHO05D001888 2.1e-07 60.1 132 28.8
QL03p058730 Quercus lobata HOM05D008070 ORTHO05D001888 2.1e-07 60.1 125 28.8
TAR629G1731 Trochodendron aralioides HOM05D008070 ORTHO05D001888 2.7e-07 59.7 133 32.3
Eucgr.H02532 Eucalyptus grandis HOM05D008070 ORTHO05D001888 4.6e-07 58.9 127 29.1
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 1.7e-06 57.0 134 30.6
MBI19_g03227_MAGBIO Magnolia biondii HOM05D005742 ORTHO05D001888 1.7e-06 57.0 114 32.5
QL04p082907 Quercus lobata HOM05D010056 ORTHO05D001888 3.0e-06 56.2 139 29.5
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 3.0e-06 56.2 136 33.1
AT3G36659 Arabidopsis thaliana HOM05D005742 ORTHO05D001888 5.1e-06 55.5 130 37.7
TWI75G1444 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 6.6e-06 55.1 129 26.4
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 8.7e-06 54.7 96 32.3


User provided reference genes

Program Settings