Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 1.2e-280 969.1 482 100.0
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 9.6e-254 879.8 487 89.5
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 1.1e-220 770.0 463 81.6
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 2.4e-220 768.8 469 80.6
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 5.9e-219 764.2 470 78.1
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 3.8e-218 761.5 470 80.0
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 2.5e-217 758.8 482 76.3
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 1.6e-216 756.1 464 78.2
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 2.3e-215 752.3 465 78.1
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 6.7e-215 750.7 462 79.2
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 2.0e-214 749.2 468 76.5
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 2.6e-214 748.8 472 77.5
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 9.7e-214 746.9 470 76.2
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 1.3e-213 746.5 393 92.1
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 4.8e-213 744.6 468 75.0
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 4.8e-213 744.6 471 76.4
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 6.3e-213 744.2 467 75.4
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 1.1e-212 743.4 466 76.8
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 1.1e-212 743.4 484 74.6
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 1.1e-212 743.4 466 76.8
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 1.4e-212 743.0 476 74.6
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 1.4e-212 743.0 468 76.5
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 5.3e-212 741.1 470 76.6
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 1.6e-211 739.6 472 75.4
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 5.9e-211 737.6 466 76.0
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.0e-210 736.9 466 75.5
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 1.7e-210 736.1 463 75.2
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 3.8e-210 734.9 469 75.1
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 5.0e-210 734.6 470 75.5
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 1.1e-209 733.4 472 75.0
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 1.5e-209 733.0 470 76.2
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.5e-209 732.3 501 71.1
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 4.2e-209 731.5 481 74.4
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 8.0e-208 727.2 473 74.6
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.0e-207 726.9 506 70.0
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 1.0e-207 726.9 494 72.5
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.8e-207 726.1 477 74.4
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 5.2e-207 724.5 476 71.4
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 6.8e-207 724.2 504 70.0
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 8.8e-207 723.8 482 73.2
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 8.8e-207 723.8 473 74.4
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 3.4e-206 721.8 466 73.8
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 3.4e-206 721.8 484 72.5
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 7.5e-206 720.7 469 74.0
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 4.8e-205 718.0 466 73.2
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 6.3e-205 717.6 507 69.2
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 3.5e-203 711.8 501 70.9
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 1.3e-202 709.9 474 72.6
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 2.1e-200 702.6 471 72.8
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 5.2e-199 698.0 461 71.6
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 6.8e-199 697.6 501 69.3
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 3.4e-198 695.3 557 67.1
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 8.3e-197 690.6 555 63.8
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 2.0e-195 686.0 482 67.8
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 5.2e-191 671.4 466 70.2
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 8.9e-191 670.6 502 63.9
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 2.9e-189 665.6 545 60.7
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 1.5e-185 653.3 461 65.9
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 3.3e-185 652.1 465 69.7
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 2.1e-184 649.4 402 77.1
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 8.3e-181 637.5 475 66.5
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 2.4e-180 636.0 403 75.9
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 2.4e-180 636.0 403 75.9
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 4.1e-180 635.2 464 63.8
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 9.2e-180 634.0 462 64.9
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.6e-179 633.3 384 78.9
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.6e-179 633.3 472 66.3
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 6.0e-179 631.3 403 73.0
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 3.0e-178 629.0 471 64.8
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 2.2e-173 612.8 473 64.1
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.9e-173 612.5 423 70.2
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.6e-168 595.5 433 67.0
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 4.7e-168 595.1 476 61.1
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 2.2e-165 586.3 467 63.8
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 3.5e-163 578.9 365 76.4
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 5.6e-161 571.6 474 62.0
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 3.4e-158 562.4 330 80.6
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 5.4e-148 528.5 368 69.6
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 8.7e-146 521.2 333 74.8
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 3.8e-141 505.8 373 70.0
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 1.9e-116 423.7 268 74.3
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 1.3e-101 374.4 234 77.4
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 7.5e-73 278.9 171 80.1
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 4.3e-68 263.1 448 32.8
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 3.7e-64 250.0 154 77.9
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 1.4e-55 221.5 235 54.9
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 3.4e-49 200.3 159 64.8
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 4.3e-44 183.3 119 68.9
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 7.6e-25 119.4 402 25.4
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 2.3e-21 107.8 77 63.6
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 1.6e-19 101.7 392 25.3
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 5.0e-16 90.1 349 25.2
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 1.4e-15 88.6 58 72.4
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 2.2e-11 74.7 473 21.4
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 1.7e-08 65.1 71 49.3


User provided reference genes

Program Settings