Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000565 Sechium edule HOM05D000244 ORTHO05D004919 2.2e-67 258.8 130 100.0
ClCG11G014540 Citrullus lanatus HOM05D000244 ORTHO05D004919 8.1e-22 107.5 107 59.8
CsaV3_3G047950 Cucumis sativus L. HOM05D000244 ORTHO05D004919 1.1e-21 107.1 105 59.0
Sed0023627 Sechium edule HOM05D000244 ORTHO05D004919 5.2e-21 104.8 97 59.8
MELO3C003526.2 Cucumis melo HOM05D000244 ORTHO05D004919 4.4e-20 101.7 99 60.6
HanXRQChr10g0303951 Helianthus annuus HOM05D000244 ORTHO05D004919 6.0e-17 91.3 107 47.7
AL1G26390 Arabidopsis lyrata HOM05D000244 ORTHO05D004919 2.3e-16 89.4 120 45.0
Ca_15997_v3 Cicer arietinum L. HOM05D000244 ORTHO05D004919 5.6e-15 84.7 116 44.0
AL8G23630 Arabidopsis lyrata HOM05D000244 ORTHO05D004919 7.3e-15 84.3 122 45.1
AT5G49700 Arabidopsis thaliana HOM05D000244 ORTHO05D004919 7.3e-15 84.3 122 45.1
TAR628G0674 Trochodendron aralioides HOM05D000244 ORTHO05D004919 9.6e-15 84.0 121 42.1
Carub.0008s0958 Capsella rubella HOM05D000244 ORTHO05D004919 1.3e-14 83.6 122 44.3
ECA232G4764 Erigeron canadensis HOM05D000244 ORTHO05D004919 1.6e-14 83.2 129 38.8
Nn1g05541 Nelumbo nucifera HOM05D000244 ORTHO05D004919 1.6e-14 83.2 118 41.5
BcaC01g04851 Brassica carinata HOM05D000244 ORTHO05D004919 2.8e-14 82.4 130 43.8
C03p33150 Brassica napus HOM05D000244 ORTHO05D004919 2.8e-14 82.4 130 43.8
BolC3t15640H Brassica oleracea HOM05D000244 ORTHO05D004919 2.8e-14 82.4 130 43.8
RcHm_v2.0_Chr7g0236871 Rosa chinensis HOM05D000244 ORTHO05D004919 2.8e-14 82.4 119 43.7
CsaV3_2G030340 Cucumis sativus L. HOM05D000244 ORTHO05D004919 3.6e-14 82.0 121 41.3
Lalb_Chr10g0102721 Lupinus albus HOM05D000244 ORTHO05D004919 4.8e-14 81.6 118 44.1
BcaB01g02948 Brassica carinata HOM05D000244 ORTHO05D004919 6.2e-14 81.3 130 43.1
MELO3C011096.2 Cucumis melo HOM05D000244 ORTHO05D004919 6.2e-14 81.3 128 41.4
CiPaw.07G166600 Carya illinoinensis HOM05D000244 ORTHO05D004919 8.1e-14 80.9 96 45.8
Sp6g10970 Schrenkiella parvula HOM05D000244 ORTHO05D004919 8.1e-14 80.9 124 42.7
ClCG08G011720 Citrullus lanatus HOM05D000244 ORTHO05D004919 1.1e-13 80.5 111 42.3
Thhalv10009678m.g Eutrema salsugineum HOM05D000244 ORTHO05D004919 1.1e-13 80.5 124 39.5
Aa31sc195G10 Aethionema arabicum HOM05D000244 ORTHO05D004919 1.4e-13 80.1 124 41.9
A03p27490 Brassica napus HOM05D000244 ORTHO05D004919 1.4e-13 80.1 130 43.1
BraA03t11962Z Brassica rapa HOM05D000244 ORTHO05D004919 1.4e-13 80.1 130 43.1
CARHR259140 Cardamine hirsuta HOM05D000244 ORTHO05D004919 1.4e-13 80.1 128 42.2
Cfa013688 Carpinus fangiana HOM05D000244 ORTHO05D004919 1.4e-13 80.1 117 41.0
Duzib093G0476 Durio zibethinus HOM05D000244 ORTHO05D004919 1.4e-13 80.1 119 42.0
Lalb_Chr04g0252891 Lupinus albus HOM05D000244 ORTHO05D004919 1.4e-13 80.1 112 42.9
FvH4_5g35490 Fragaria vesca HOM05D000244 ORTHO05D004919 1.8e-13 79.7 119 43.7
FAN18G1982 Fragaria x ananassa HOM05D000244 ORTHO05D004919 1.8e-13 79.7 119 43.7
Glyma.04G091600 Glycine max HOM05D000244 ORTHO05D004919 1.8e-13 79.7 111 44.1
Phvul.009G144300 Phaseolus vulgaris HOM05D000244 ORTHO05D004919 1.8e-13 79.7 114 43.0
Carub.0001s1421 Capsella rubella HOM05D000244 ORTHO05D004919 2.4e-13 79.3 121 40.5
Prupe.1G530300 Prunus persica HOM05D000244 ORTHO05D004919 2.4e-13 79.3 121 40.5
Ca_05426_v3 Cicer arietinum L. HOM05D000244 ORTHO05D004919 3.1e-13 79.0 103 43.7
FAN04G1436 Fragaria x ananassa HOM05D000244 ORTHO05D004919 3.1e-13 79.0 120 42.5
FAN13G0285 Fragaria x ananassa HOM05D000244 ORTHO05D004919 3.1e-13 79.0 120 42.5
FAN08G2285 Fragaria x ananassa HOM05D000244 ORTHO05D004919 4.0e-13 78.6 119 42.9
CSS0024913 Camellia sinensis var. sinensis HOM05D000244 ORTHO05D004919 5.3e-13 78.2 128 39.8
Haze_22329 Corylus avellana HOM05D000244 ORTHO05D004919 5.3e-13 78.2 117 40.2
Glyma.06G093400 Glycine max HOM05D000244 ORTHO05D004919 5.3e-13 78.2 114 43.0
THA.LOC104803426 Tarenaya hassleriana HOM05D000244 ORTHO05D004919 9.0e-13 77.4 114 45.6
Cpa.g.sc21.4 Carica papaya HOM05D000244 ORTHO05D004919 1.2e-12 77.0 124 41.1
Nn5g29909 Nelumbo nucifera HOM05D000244 ORTHO05D004919 1.2e-12 77.0 116 40.5
Lj4A89T40 Lonicera japonica HOM05D000244 ORTHO05D004919 1.5e-12 76.6 115 38.3
Glyma.14G181200 Glycine max HOM05D000244 ORTHO05D004919 2.0e-12 76.3 88 47.7
Psat5g046320 Pisum sativum HOM05D000244 ORTHO05D004919 2.0e-12 76.3 99 47.5
Potri.002G105000 Populus trichocarpa HOM05D000244 ORTHO05D004919 2.0e-12 76.3 121 40.5
CANSAT25G2988 Cannabis sativa HOM05D000244 ORTHO05D004919 2.6e-12 75.9 105 44.8
PGR042G1021 Punica granatum HOM05D000244 ORTHO05D004919 2.6e-12 75.9 120 40.0
Gohir.D02G085900 Gossypium hirsutum HOM05D000244 ORTHO05D004919 3.4e-12 75.5 125 39.2
Sabra05G0120300 Salix brachista HOM05D000244 ORTHO05D004919 3.4e-12 75.5 127 39.4
arahy.Tifrunner.gnm1.ann1.6X9KLT Arachis hypogaea HOM05D000244 ORTHO05D004919 4.4e-12 75.1 123 38.2
Gohir.D05G223100 Gossypium hirsutum HOM05D000244 ORTHO05D004919 4.4e-12 75.1 107 40.2
Lalb_Chr11g0065051 Lupinus albus HOM05D000244 ORTHO05D004919 4.4e-12 75.1 91 48.4
Manes.02G145600 Manihot esculenta HOM05D000244 ORTHO05D004919 4.4e-12 75.1 122 38.5
QL09p017582 Quercus lobata HOM05D000244 ORTHO05D004919 4.4e-12 75.1 120 42.5
Medtr5g066020 Medicago truncatula HOM05D000244 ORTHO05D004919 5.8e-12 74.7 100 44.0
MD15G1384100 Malus domestica HOM05D000244 ORTHO05D004919 7.6e-12 74.3 121 39.7
BcaB02g06503 Brassica carinata HOM05D000244 ORTHO05D004919 9.9e-12 73.9 117 41.9
Glyma.02G213500 Glycine max HOM05D000244 ORTHO05D004919 9.9e-12 73.9 97 43.3
Sabra02G0082400 Salix brachista HOM05D000244 ORTHO05D004919 9.9e-12 73.9 121 37.2
Sed0019274 Sechium edule HOM05D000244 ORTHO05D004919 9.9e-12 73.9 127 38.6
PGSC0003DMG400002047 Solanum tuberosum HOM05D000244 ORTHO05D004919 9.9e-12 73.9 108 38.0
VMungo1076G0001 Vigna mungo HOM05D000244 ORTHO05D004919 9.9e-12 73.9 101 41.6
MD08G1196300 Malus domestica HOM05D000244 ORTHO05D004919 1.3e-11 73.6 100 44.0
CSS0028409 Camellia sinensis var. sinensis HOM05D000244 ORTHO05D004919 1.7e-11 73.2 113 40.7
VMungo1309G2380 Vigna mungo HOM05D000244 ORTHO05D004919 1.7e-11 73.2 114 41.2
Gohir.A02G078700 Gossypium hirsutum HOM05D000244 ORTHO05D004919 2.2e-11 72.8 124 40.3
Psat2g066000 Pisum sativum HOM05D000244 ORTHO05D004919 2.2e-11 72.8 97 41.2
A06p10550 Brassica napus HOM05D000244 ORTHO05D004919 2.9e-11 72.4 113 40.7
C05p12420 Brassica napus HOM05D000244 ORTHO05D004919 2.9e-11 72.4 119 39.5
BraA06t24235Z Brassica rapa HOM05D000244 ORTHO05D004919 2.9e-11 72.4 113 40.7
THA.LOC104824569 Tarenaya hassleriana HOM05D000244 ORTHO05D004919 2.9e-11 72.4 122 42.6
Gorai.005G096700 Gossypium raimondii HOM05D000244 ORTHO05D004919 3.8e-11 72.0 129 38.8
Phvul.008G181100 Phaseolus vulgaris HOM05D000244 ORTHO05D004919 3.8e-11 72.0 99 41.4
BcaC05g25357 Brassica carinata HOM05D000244 ORTHO05D004919 4.9e-11 71.6 119 39.5
TAR376G0027 Trochodendron aralioides HOM05D000244 ORTHO05D004919 4.9e-11 71.6 119 40.3
Medtr3g100470 Medicago truncatula HOM05D000244 ORTHO05D004919 6.4e-11 71.2 112 40.2
MBI06_g36040_MAGBIO Magnolia biondii HOM05D000244 ORTHO05D004919 8.4e-11 70.9 126 38.1
TPR.G26048 Trifolium pratense HOM05D000244 ORTHO05D004919 8.4e-11 70.9 111 39.6
BolC5t29988H Brassica oleracea HOM05D000244 ORTHO05D004919 1.1e-10 70.5 119 37.8
MBI02_g32611_MAGBIO Magnolia biondii HOM05D000244 ORTHO05D004919 1.1e-10 70.5 99 38.4
COL.COLO4_35218 Corchorus olitorius HOM05D000244 ORTHO05D004919 1.9e-10 69.7 120 38.3
SGA_v2.0_scaffold28G11895 Striga asiatica HOM05D000244 ORTHO05D004919 1.9e-10 69.7 107 38.3
LjContig00408g0000570 Lotus japonicus HOM05D000244 ORTHO05D004919 2.4e-10 69.3 106 39.6
Sopen12g029980 Solanum pennellii HOM05D000244 ORTHO05D004919 2.4e-10 69.3 108 38.9
Lsat_1_v5_gn_6_106180 Lactuca sativa HOM05D000244 ORTHO05D004919 3.2e-10 68.9 113 38.9
Nitab4.5_0001607g0050 Nicotiana tabacum HOM05D000244 ORTHO05D004919 4.2e-10 68.6 98 38.8
Lalb_Chr08g0242471 Lupinus albus HOM05D000244 ORTHO05D004919 5.4e-10 68.2 111 37.8
PGR031G2842 Punica granatum HOM05D000244 ORTHO05D004919 5.4e-10 68.2 107 40.2
Nitab4.5_0008771g0010 Nicotiana tabacum HOM05D000244 ORTHO05D004919 7.1e-10 67.8 122 36.1
Solyc12g087950.1 Solanum lycopersicum HOM05D000244 ORTHO05D004919 7.1e-10 67.8 107 38.3
CAN.G475.42 Capsicum annuum HOM05D000244 ORTHO05D004919 9.3e-10 67.4 115 37.4
CiPaw.08G054900 Carya illinoinensis HOM05D000244 ORTHO05D004919 9.3e-10 67.4 117 36.8
Manes.18G059800 Manihot esculenta HOM05D000244 ORTHO05D004919 9.3e-10 67.4 119 36.1
TWI12G1174 Tripterygium wilfordii HOM05D000244 ORTHO05D004919 9.3e-10 67.4 119 38.7
CARHR014940 Cardamine hirsuta HOM05D000244 ORTHO05D004919 1.2e-09 67.0 124 38.7
Thecc.08G069500 Theobroma cacao HOM05D000244 ORTHO05D004919 1.2e-09 67.0 118 36.4
Duzib041G0591 Durio zibethinus HOM05D000244 ORTHO05D004919 2.1e-09 66.2 124 36.3
TPR.G16028 Trifolium pratense HOM05D000244 ORTHO05D004919 2.1e-09 66.2 99 40.4
PGSC0003DMG400009365 Solanum tuberosum HOM05D000244 ORTHO05D004919 2.7e-09 65.9 116 35.3
Migut.N02869 Erythranthe guttata HOM05D000244 ORTHO05D004919 3.5e-09 65.5 113 38.9
TAR381G0576 Trochodendron aralioides HOM05D000244 ORTHO05D004919 4.6e-09 65.1 116 34.5
Duzib116G0561 Durio zibethinus HOM05D000244 ORTHO05D004919 6.0e-09 64.7 103 37.9
Gorai.009G230300 Gossypium raimondii HOM05D000244 ORTHO05D004919 6.0e-09 64.7 120 34.2
CDE06G0349 Ceratophyllum demersum HOM05D000344 ORTHO05D000934 7.8e-09 64.3 108 38.9
DCAR_020018 Daucus carota HOM05D000244 ORTHO05D004919 7.8e-09 64.3 113 35.4
Hma1.2p1_0125F.1_g058970 Hydrangea macrophylla HOM05D000244 ORTHO05D004919 1.0e-08 63.9 124 35.5
Actinidia19636 Actinidia chinensis HOM05D000244 ORTHO05D004919 1.3e-08 63.5 74 48.6
Gohir.A05G220300 Gossypium hirsutum HOM05D000244 ORTHO05D004919 1.3e-08 63.5 101 36.6
Lalb_Chr17g0344481 Lupinus albus HOM05D000244 ORTHO05D004919 1.7e-08 63.2 114 37.7
Lj4P736T15 Lonicera japonica HOM05D000244 ORTHO05D004919 3.0e-08 62.4 102 39.2
Lj1g0018819 Lotus japonicus HOM05D000244 ORTHO05D004919 3.0e-08 62.4 110 35.5
Potri.005G156700 Populus trichocarpa HOM05D000244 ORTHO05D004919 3.0e-08 62.4 126 34.9
Rhsim06G0072500 Rhododendron simsii HOM05D000244 ORTHO05D004919 3.0e-08 62.4 117 35.9
Aqoxy5G01313 Aquilegia oxysepala HOM05D000244 ORTHO05D004919 5.1e-08 61.6 101 37.6
Oeu020241.1 Olea europaea HOM05D000244 ORTHO05D004919 5.1e-08 61.6 114 36.0
Sopen00g009810 Solanum pennellii HOM05D000244 ORTHO05D004919 5.1e-08 61.6 120 33.3
Cc10_g15800 Coffea canephora HOM05D000244 ORTHO05D004919 6.6e-08 61.2 138 33.3
Solyc04g076220.3 Solanum lycopersicum HOM05D000244 ORTHO05D004919 6.6e-08 61.2 117 33.3
Actinidia30823 Actinidia chinensis HOM05D000244 ORTHO05D004919 8.7e-08 60.8 78 42.3
Dinv44851 Davidia involucrata HOM05D000244 ORTHO05D004919 8.7e-08 60.8 78 50.0
AT1G14490 Arabidopsis thaliana HOM05D000244 ORTHO05D004919 1.1e-07 60.5 68 45.6
Ciclev10001847m.g Citrus clementina HOM05D000244 ORTHO05D004919 1.5e-07 60.1 131 32.8
PSO017G6431 Papaver somniferum HOM05D000244 ORTHO05D004919 2.5e-07 59.3 59 52.5
PSO170G2434 Papaver somniferum HOM05D000244 ORTHO05D004919 2.5e-07 59.3 59 52.5
SGA_v2.0_scaffold84G26475 Striga asiatica HOM05D000244 ORTHO05D004919 2.5e-07 59.3 91 36.3
Gohir.D06G032000 Gossypium hirsutum HOM05D000244 ORTHO05D004919 3.3e-07 58.9 122 33.6
Nitab4.5_0000131g0370 Nicotiana tabacum HOM05D000244 ORTHO05D004919 3.3e-07 58.9 122 32.0
DCAR_009569 Daucus carota HOM05D000244 ORTHO05D004919 4.3e-07 58.5 111 36.0
Nitab4.5_0000354g0170 Nicotiana tabacum HOM05D000244 ORTHO05D004919 4.3e-07 58.5 106 35.8
Lsat_1_v5_gn_9_75400 Lactuca sativa HOM05D000244 ORTHO05D004919 5.6e-07 58.2 66 47.0
Oeu034887.1 Olea europaea HOM05D000244 ORTHO05D004919 7.3e-07 57.8 114 35.1
Peaxi162Scf00979g00022 Petunia axillaris HOM05D000244 ORTHO05D004919 9.6e-07 57.4 143 30.1
vmacro04657 Vaccinium macrocarpon HOM05D000244 ORTHO05D004919 9.6e-07 57.4 69 44.9
Gorai.010G035300 Gossypium raimondii HOM05D000244 ORTHO05D004919 1.6e-06 56.6 120 32.5
Aqoxy6G01448 Aquilegia oxysepala HOM05D000244 ORTHO05D004919 2.1e-06 56.2 113 38.1
CAN.G806.10 Capsicum annuum HOM05D000244 ORTHO05D004919 2.8e-06 55.8 68 44.1
Gohir.A06G032612 Gossypium hirsutum HOM05D000244 ORTHO05D004919 2.8e-06 55.8 122 32.0
Atru.chr13.1028 Acer truncatum HOM05D000244 ORTHO05D004919 3.6e-06 55.5 49 55.1
ATR0022G007 Amborella trichopoda HOM05D000244 ORTHO05D004919 4.8e-06 55.1 95 33.7
MSTRG.22172 Avicennia marina HOM05D000244 ORTHO05D004919 8.1e-06 54.3 95 37.9


User provided reference genes

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