Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 2.7e-39 165.6 142 100.0
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 6.3e-20 101.3 144 80.6
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 1.7e-17 93.2 144 79.2
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 5.0e-17 91.7 144 78.5
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 1.2e-15 87.0 139 73.4
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 8.3e-12 74.3 146 37.0
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 7.0e-11 71.2 143 62.2
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.7e-10 69.3 136 64.7
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 2.7e-10 69.3 143 58.0
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 4.5e-10 68.6 132 68.2
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 7.8e-10 67.8 143 61.5
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.3e-09 66.2 144 61.8
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 3.8e-09 65.5 144 61.1
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 3.8e-09 65.5 143 64.3
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 3.8e-09 65.5 137 62.0
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 5.0e-09 65.1 143 63.6
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 5.0e-09 65.1 138 64.5
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 8.6e-09 64.3 138 60.1
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 8.6e-09 64.3 143 55.9
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 8.6e-09 64.3 143 56.6
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 1.1e-08 63.9 131 70.2
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.9e-08 63.2 130 60.0
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 1.9e-08 63.2 146 65.8
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 2.5e-08 62.8 131 59.5
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 3.3e-08 62.4 141 63.1
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 4.3e-08 62.0 141 57.4
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 4.3e-08 62.0 141 57.4
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 5.6e-08 61.6 149 62.4
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 5.6e-08 61.6 139 66.2
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 5.6e-08 61.6 130 67.7
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 7.3e-08 61.2 142 62.7
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 7.3e-08 61.2 132 68.9
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 9.5e-08 60.8 130 63.8
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 1.6e-07 60.1 129 69.8
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 1.6e-07 60.1 131 71.0
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 2.1e-07 59.7 113 74.3
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 4.7e-07 58.5 109 66.1
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 4.7e-07 58.5 139 68.3
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 4.7e-07 58.5 142 61.3
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 4.7e-07 58.5 142 61.3
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 6.1e-07 58.2 114 70.2
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 8.0e-07 57.8 109 63.3
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 8.0e-07 57.8 121 71.9
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 1.0e-06 57.4 136 68.4
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.4e-06 57.0 141 63.8
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 1.4e-06 57.0 122 63.9
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.8e-06 56.6 134 35.8
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 1.8e-06 56.6 126 65.1
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 2.3e-06 56.2 37 73.0
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 2.3e-06 56.2 131 63.4
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 2.3e-06 56.2 144 65.3
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 4.0e-06 55.5 133 63.2
Lsat_1_v5_gn_6_15060 Lactuca sativa HOM05D006719 ORTHO05D007063 5.2e-06 55.1 42 66.7
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 8.9e-06 54.3 124 66.9
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 8.9e-06 54.3 99 77.8


User provided reference genes

Program Settings