Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 1.3e-85 319.7 163 100.0
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 2.7e-67 258.8 171 78.9
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 2.4e-63 245.7 163 78.5
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 4.4e-57 224.9 167 67.7
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 1.7e-56 223.0 171 67.3
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 2.2e-56 222.6 171 67.3
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 2.4e-55 219.2 171 67.3
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 3.8e-53 211.8 173 64.2
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 3.2e-52 208.8 167 62.3
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 5.5e-52 208.0 174 61.5
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 1.5e-49 199.9 169 59.2
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 1.3e-48 196.8 164 59.8
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 1.3e-48 196.8 164 59.8
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 2.2e-48 196.1 164 59.8
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 5.3e-47 191.4 174 58.0
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 9.1e-47 190.7 176 59.7
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 1.6e-46 189.9 170 57.6
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 1.6e-46 189.9 166 65.7
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 3.5e-46 188.7 170 58.8
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 1.0e-45 187.2 172 57.0
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 2.9e-45 185.7 183 52.5
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 2.9e-45 185.7 176 57.4
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 8.5e-45 184.1 173 57.2
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 1.9e-44 183.0 173 56.6
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 5.5e-44 181.4 170 57.1
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 9.4e-44 180.6 170 54.1
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 1.2e-43 180.3 175 55.4
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 1.6e-43 179.9 168 56.5
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 1.0e-42 177.2 174 53.4
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 4.0e-42 175.3 172 54.7
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 6.8e-42 174.5 163 55.8
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 6.8e-42 174.5 163 55.8
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 6.8e-42 174.5 169 57.4
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 8.8e-42 174.1 159 54.1
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 1.5e-41 173.3 168 54.2
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 3.4e-41 172.2 163 55.2
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 3.4e-41 172.2 163 55.2
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 3.4e-41 172.2 163 55.2
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 5.7e-41 171.4 163 54.6
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 5.7e-41 171.4 175 55.4
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 7.5e-41 171.0 170 54.1
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 7.5e-41 171.0 176 55.7
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 9.7e-41 170.6 162 53.1
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.7e-40 169.9 176 54.5
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 2.8e-40 169.1 173 52.6
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 3.7e-40 168.7 176 55.1
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 6.3e-40 167.9 176 50.6
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 1.4e-39 166.8 169 53.8
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 1.8e-39 166.4 170 52.4
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 2.4e-39 166.0 168 53.0
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 4.1e-39 165.2 174 51.1
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 4.1e-39 165.2 176 50.0
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 5.3e-39 164.9 177 54.2
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 7.0e-39 164.5 161 52.8
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 1.2e-38 163.7 170 53.5
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 2.0e-38 162.9 167 51.5
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 3.5e-38 162.2 174 50.6
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 4.5e-38 161.8 152 54.6
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 4.5e-38 161.8 164 54.3
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 2.2e-37 159.5 152 53.9
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 2.2e-37 159.5 167 53.3
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 2.9e-37 159.1 171 48.5
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 2.9e-37 159.1 166 53.0
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 5.0e-37 158.3 168 51.8
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 6.5e-37 157.9 167 50.9
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 1.5e-36 156.8 168 51.2
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 1.9e-36 156.4 168 51.2
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 2.5e-36 156.0 171 52.0
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 2.7e-35 152.5 168 52.4
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 3.6e-35 152.1 172 50.6
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 1.0e-34 150.6 169 50.3
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 4.0e-34 148.7 174 48.3
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 4.4e-33 145.2 170 46.5
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 7.5e-33 144.4 169 45.6
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 1.3e-32 143.7 140 53.6
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 3.7e-32 142.1 165 46.7
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 8.3e-32 141.0 170 47.1
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 1.2e-30 137.1 167 45.5
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 3.8e-29 132.1 162 46.9
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 1.1e-28 130.6 162 45.1
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 1.5e-28 130.2 156 48.1
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 3.3e-28 129.0 167 46.1
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 7.2e-28 127.9 166 45.2
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 1.8e-26 123.2 162 47.5
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 3.0e-26 122.5 162 43.8
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 3.0e-26 122.5 142 45.8
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.2e-25 120.6 162 43.8
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 4.4e-25 118.6 162 44.4
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 2.8e-24 115.9 170 44.1
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 4.5e-22 108.6 141 45.4
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 1.0e-21 107.5 121 47.1
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 6.6e-21 104.8 166 41.6
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.6e-19 100.1 138 42.8
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 2.3e-18 96.3 125 44.0
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 1.9e-15 86.7 142 38.7
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 2.4e-15 86.3 102 44.1
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 9.2e-15 84.3 131 38.2
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 2.0e-09 66.6 129 34.9
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 7.5e-09 64.7 100 39.0
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 4.9e-08 62.0 178 29.2
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 1.9e-07 60.1 179 27.4
EL10Ac3g06136 Beta vulgaris HOM05D007459 ORTHO05D009234 5.4e-07 58.5 74 41.9
ECA238G4467 Erigeron canadensis HOM05D007459 ORTHO05D009234 9.2e-07 57.8 74 44.6


User provided reference genes

Program Settings