Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000486 Sechium edule HOM05D005761 ORTHO05D007286 1.3e-85 319.7 159 100.0
CsaV3_3G005910 Cucumis sativus L. HOM05D005761 ORTHO05D007286 6.7e-79 297.4 159 91.8
MELO3C016564.2 Cucumis melo HOM05D005761 ORTHO05D007286 8.2e-77 290.4 155 91.6
ClCG09G001920 Citrullus lanatus HOM05D005761 ORTHO05D007286 1.6e-75 286.2 156 89.1
ClCG10G006430 Citrullus lanatus HOM05D005761 ORTHO05D007286 1.7e-69 266.2 159 84.3
Rhsim08G0224400 Rhododendron simsii HOM05D005761 ORTHO05D007286 2.8e-69 265.4 160 80.6
vmacro18882 Vaccinium macrocarpon HOM05D005761 ORTHO05D007286 4.8e-69 264.6 155 80.0
CSS0019454 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 1.1e-68 263.5 160 80.0
CSS0045926 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 1.1e-68 263.5 160 80.0
arahy.Tifrunner.gnm1.ann1.QAD112 Arachis hypogaea HOM05D005761 ORTHO05D007286 1.8e-68 262.7 160 78.1
CiPaw.01G235200 Carya illinoinensis HOM05D005761 ORTHO05D007286 2.4e-68 262.3 159 78.6
RcHm_v2.0_Chr2g0139151 Rosa chinensis HOM05D005761 ORTHO05D007286 5.4e-68 261.2 160 76.9
TWI75G0371 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 7.0e-68 260.8 159 76.7
QL05p021523 Quercus lobata HOM05D005761 ORTHO05D007286 9.1e-68 260.4 158 76.6
arahy.Tifrunner.gnm1.ann1.IDML3X Arachis hypogaea HOM05D005761 ORTHO05D007286 1.2e-67 260.0 160 76.9
Prupe.6G357100 Prunus persica HOM05D005761 ORTHO05D007286 1.2e-67 260.0 160 78.1
Sc12g0009490 Simmondsia chinensis HOM05D005761 ORTHO05D007286 1.6e-67 259.6 160 78.1
CAN.G438.30 Capsicum annuum HOM05D005761 ORTHO05D007286 2.7e-67 258.8 159 76.1
Eucgr.F03043 Eucalyptus grandis HOM05D005761 ORTHO05D007286 2.7e-67 258.8 160 76.2
Gohir.A10G081800 Gossypium hirsutum HOM05D005761 ORTHO05D007286 3.5e-67 258.5 156 80.1
TWI12G1054 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 3.5e-67 258.5 156 75.0
Ciclev10022630m.g Citrus clementina HOM05D005761 ORTHO05D007286 4.5e-67 258.1 160 76.2
Hma1.2p1_1195F.1_g265890 Hydrangea macrophylla HOM05D005761 ORTHO05D007286 4.5e-67 258.1 156 78.8
Gorai.011G073900 Gossypium raimondii HOM05D005761 ORTHO05D007286 7.7e-67 257.3 156 80.1
Dinv38013 Davidia involucrata HOM05D005761 ORTHO05D007286 1.0e-66 256.9 157 77.7
FvH4_6g31840 Fragaria vesca HOM05D005761 ORTHO05D007286 1.0e-66 256.9 157 76.4
FAN14G3194 Fragaria x ananassa HOM05D005761 ORTHO05D007286 1.0e-66 256.9 157 76.4
Atru.chr5.1334 Acer truncatum HOM05D005761 ORTHO05D007286 1.3e-66 256.5 157 77.7
Haze_16351 Corylus avellana HOM05D005761 ORTHO05D007286 1.3e-66 256.5 159 76.7
Lj3g0012819 Lotus japonicus HOM05D005761 ORTHO05D007286 1.3e-66 256.5 152 80.3
COL.COLO4_30441 Corchorus olitorius HOM05D005761 ORTHO05D007286 1.7e-66 256.1 153 82.4
Gohir.D10G069650 Gossypium hirsutum HOM05D005761 ORTHO05D007286 1.7e-66 256.1 156 80.1
Duzib192G1004 Durio zibethinus HOM05D005761 ORTHO05D007286 2.2e-66 255.8 160 78.8
Atru.chr5.1303 Acer truncatum HOM05D005761 ORTHO05D007286 2.9e-66 255.4 160 76.9
FAN09G1691 Fragaria x ananassa HOM05D005761 ORTHO05D007286 2.9e-66 255.4 156 75.6
PGSC0003DMG401002548 Solanum tuberosum HOM05D005761 ORTHO05D007286 3.8e-66 255.0 159 76.7
Cc04_g07670 Coffea canephora HOM05D005761 ORTHO05D007286 5.0e-66 254.6 156 76.9
Glyma.08G204400 Glycine max HOM05D005761 ORTHO05D007286 5.0e-66 254.6 160 76.9
Nn2g11672 Nelumbo nucifera HOM05D005761 ORTHO05D007286 5.0e-66 254.6 152 78.9
Thecc.06G093100 Theobroma cacao HOM05D005761 ORTHO05D007286 5.0e-66 254.6 160 78.8
Cpa.g.sc33.106 Carica papaya HOM05D005761 ORTHO05D007286 8.5e-66 253.8 159 75.5
Gohir.D05G131700 Gossypium hirsutum HOM05D005761 ORTHO05D007286 8.5e-66 253.8 159 79.2
Gorai.009G135400 Gossypium raimondii HOM05D005761 ORTHO05D007286 8.5e-66 253.8 159 79.2
Solyc03g120610.3 Solanum lycopersicum HOM05D005761 ORTHO05D007286 8.5e-66 253.8 159 75.5
Sopen00g008190 Solanum pennellii HOM05D005761 ORTHO05D007286 8.5e-66 253.8 159 75.5
MD17G1190700 Malus domestica HOM05D005761 ORTHO05D007286 1.1e-65 253.4 159 75.5
EL10Ac9g22057 Beta vulgaris HOM05D005761 ORTHO05D007286 1.5e-65 253.1 157 77.1
Ah.01g005570 Amaranthus hybridus HOM05D005761 ORTHO05D001133 1.9e-65 252.7 183 69.4
FAN05G4602 Fragaria x ananassa HOM05D005761 ORTHO05D007286 1.9e-65 252.7 156 75.6
HanXRQChr09g0275451 Helianthus annuus HOM05D005761 ORTHO05D007286 1.9e-65 252.7 157 73.9
Manes.04G130300 Manihot esculenta HOM05D005761 ORTHO05D007286 1.9e-65 252.7 157 77.1
PGR102G2101 Punica granatum HOM05D005761 ORTHO05D007286 1.9e-65 252.7 160 75.6
Gohir.A05G132200 Gossypium hirsutum HOM05D005761 ORTHO05D007286 2.5e-65 252.3 159 78.6
Nn3g18106 Nelumbo nucifera HOM05D005761 ORTHO05D007286 2.5e-65 252.3 153 78.4
Cfa014791 Carpinus fangiana HOM05D005761 ORTHO05D007286 7.2e-65 250.8 155 76.8
DCAR_016208 Daucus carota HOM05D005761 ORTHO05D007286 9.4e-65 250.4 159 75.5
Lsat_1_v5_gn_4_103261 Lactuca sativa HOM05D005761 ORTHO05D007286 1.2e-64 250.0 160 73.1
Ca_06670_v3 Cicer arietinum L. HOM05D005761 ORTHO05D007286 3.6e-64 248.4 165 73.9
Lj5A57G74 Lonicera japonica HOM05D005761 ORTHO05D007286 3.6e-64 248.4 158 75.9
GSVIVG01017058001 Vitis vinifera HOM05D005761 ORTHO05D007286 3.6e-64 248.4 160 71.9
CDE05G3104 Ceratophyllum demersum HOM05D005761 ORTHO05D007286 4.7e-64 248.1 147 78.9
PGR102G0188 Punica granatum HOM05D005761 ORTHO05D007286 4.7e-64 248.1 160 75.6
unitig_37.g12255 Utricularia gibba HOM05D005761 ORTHO05D007286 4.7e-64 248.1 153 76.5
PSO063G2446 Papaver somniferum HOM05D005761 ORTHO05D007286 6.1e-64 247.7 152 76.3
Psat2g181000 Pisum sativum HOM05D005761 ORTHO05D007286 6.1e-64 247.7 159 76.1
Lalb_Chr25g0280001 Lupinus albus HOM05D005761 ORTHO05D007286 8.0e-64 247.3 154 76.6
Oeu000460.1 Olea europaea HOM05D005761 ORTHO05D007286 8.0e-64 247.3 157 75.8
Cfa002100 Carpinus fangiana HOM05D005761 ORTHO05D001133 1.8e-63 246.1 155 75.5
SGA_v2.0_scaffold80G25854 Striga asiatica HOM05D005761 ORTHO05D007286 1.8e-63 246.1 159 76.1
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 2.3e-63 245.7 161 75.2
Potri.003G052000 Populus trichocarpa HOM05D005761 ORTHO05D007286 2.3e-63 245.7 154 76.0
SGA_v2.0_scaffold5G02550 Striga asiatica HOM05D005761 ORTHO05D007286 3.0e-63 245.4 159 76.1
THA.LOC104813554 Tarenaya hassleriana HOM05D005761 ORTHO05D007286 5.2e-63 244.6 159 71.7
Rhsim09G0202300 Rhododendron simsii HOM05D005761 ORTHO05D007286 6.8e-63 244.2 161 75.8
DCAR_023065 Daucus carota HOM05D005761 ORTHO05D007286 8.8e-63 243.8 161 73.3
Nitab4.5_0001315g0120 Nicotiana tabacum HOM05D005761 ORTHO05D007286 1.2e-62 243.4 158 74.1
Phvul.010G148400 Phaseolus vulgaris HOM05D005761 ORTHO05D007286 1.2e-62 243.4 157 74.5
PSO170G4248 Papaver somniferum HOM05D005761 ORTHO05D007286 1.5e-62 243.0 152 74.3
Medtr5g011180 Medicago truncatula HOM05D005761 ORTHO05D007286 2.0e-62 242.7 165 73.3
Sabra01G0154700 Salix brachista HOM05D005761 ORTHO05D007286 2.6e-62 242.3 154 77.9
Nitab4.5_0007217g0020 Nicotiana tabacum HOM05D005761 ORTHO05D007286 4.4e-62 241.5 141 80.1
VMungo0464G1667 Vigna mungo HOM05D005761 ORTHO05D007286 5.7e-62 241.1 157 73.2
Cpa.g.sc37.42 Carica papaya HOM05D005761 ORTHO05D007286 7.5e-62 240.7 165 71.5
Nitab4.5_0006311g0030 Nicotiana tabacum HOM05D005761 ORTHO05D007286 1.3e-61 240.0 159 73.0
AUR62016504 Chenopodium quinoa HOM05D005761 ORTHO05D007286 1.7e-61 239.6 155 75.5
Migut.I00937 Erythranthe guttata HOM05D005761 ORTHO05D007286 2.2e-61 239.2 155 71.6
MBI01_g30861_MAGBIO Magnolia biondii HOM05D005761 ORTHO05D007286 3.7e-61 238.4 142 78.9
Zm00001eb237310 Zea mays HOM05D005761 ORTHO05D007286 3.7e-61 238.4 148 73.6
RcHm_v2.0_Chr2g0139101 Rosa chinensis HOM05D005761 ORTHO05D007286 6.3e-61 237.7 160 72.5
ECA232G2351 Erigeron canadensis HOM05D005761 ORTHO05D007286 8.3e-61 237.3 157 68.2
Oeu059462.1 Olea europaea HOM05D005761 ORTHO05D007286 8.3e-61 237.3 179 67.0
MSTRG.22659 Avicennia marina HOM05D005761 ORTHO05D007286 1.4e-60 236.5 153 73.2
TAR624G1072 Trochodendron aralioides HOM05D005761 ORTHO05D007286 2.4e-60 235.7 152 75.7
Peaxi162Scf00015g00136 Petunia axillaris HOM05D005761 ORTHO05D007286 4.1e-60 235.0 159 71.1
Os02g0275100 Oryza sativa ssp. japonica HOM05D005761 ORTHO05D007286 5.4e-60 234.6 137 80.3
TPR.G19588 Trifolium pratense HOM05D005761 ORTHO05D007286 2.0e-59 232.6 180 65.0
HPP92_024576 Vanilla planifolia HOM05D005761 ORTHO05D007286 2.7e-59 232.3 149 73.2
Aa31LG5G21060 Aethionema arabicum HOM05D000113 ORTHO05D001108 2.3e-58 229.2 157 72.0
ATR0315G131 Amborella trichopoda HOM05D005761 ORTHO05D007286 3.8e-58 228.4 143 72.0
Thhalv10008971m.g Eutrema salsugineum HOM05D005761 ORTHO05D007286 4.2e-57 224.9 156 69.9
Peaxi162Scf00029g02413 Petunia axillaris HOM05D005761 ORTHO05D007286 4.2e-57 224.9 160 70.0
Carub.0001s1498 Capsella rubella HOM05D005761 ORTHO05D007286 3.0e-55 218.8 156 66.7
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 2.6e-54 215.7 156 66.7
Sp1g13540 Schrenkiella parvula HOM05D005761 ORTHO05D007286 4.4e-54 214.9 156 66.0
AL1G27310 Arabidopsis lyrata HOM05D005761 ORTHO05D007286 9.8e-54 213.8 156 66.0
BcaC07g38774 Brassica carinata HOM05D005761 ORTHO05D007286 3.7e-53 211.8 143 69.2
CANSAT56G0921 Cannabis sativa HOM05D005761 ORTHO05D007286 3.7e-53 211.8 162 63.6
CARHR015750 Cardamine hirsuta HOM05D005761 ORTHO05D007286 3.7e-53 211.8 156 65.4
A06p11220 Brassica napus HOM05D005761 ORTHO05D007286 1.1e-52 210.3 156 65.4
BraA06t24302Z Brassica rapa HOM05D005761 ORTHO05D007286 1.1e-52 210.3 156 65.4
C05p13350 Brassica napus HOM05D005761 ORTHO05D007286 1.4e-52 209.9 141 70.2
BolC5t30072H Brassica oleracea HOM05D005761 ORTHO05D007286 3.2e-52 208.8 141 69.5
AT1G15220 Arabidopsis thaliana HOM05D005761 ORTHO05D007286 7.0e-52 207.6 156 64.7
C08p17060 Brassica napus HOM05D000103 ORTHO05D000049 1.2e-51 206.8 156 64.1
BolC8t49332H Brassica oleracea HOM05D005761 ORTHO05D007286 1.2e-51 206.8 156 64.1
SalBow2G2609 Salvia bowleyana HOM05D005761 ORTHO05D007286 1.6e-51 206.5 197 53.8
A08p31680 Brassica napus HOM05D005761 ORTHO05D007286 2.7e-51 205.7 156 64.1
BraA08t35090Z Brassica rapa HOM05D005761 ORTHO05D007286 2.7e-51 205.7 156 64.1
Actinidia32723 Actinidia chinensis HOM05D005761 ORTHO05D007286 9.5e-49 197.2 124 75.8
TAR636G0897 Trochodendron aralioides HOM05D005761 ORTHO05D007286 2.8e-48 195.7 146 64.4
Duzib160G0104 Durio zibethinus HOM05D005761 ORTHO05D007286 8.0e-48 194.1 155 66.5
SHI11001 Sapria himalayana HOM05D005761 ORTHO05D007286 1.0e-47 193.7 150 60.0
SEGI_40479 Sequoiadendron giganteum HOM05D005761 ORTHO05D007286 3.2e-44 182.2 129 65.1
Cfa014792 Carpinus fangiana HOM05D005761 ORTHO05D007286 1.3e-42 176.8 112 71.4
Pp3c3_29950 Physcomitrium patens HOM05D005761 ORTHO05D007286 9.8e-38 160.6 152 54.6
BcaC05g25451 Brassica carinata HOM05D005761 ORTHO05D007286 4.9e-37 158.3 119 63.9
Glyma.07G019200 Glycine max HOM05D005761 ORTHO05D007286 1.4e-36 156.8 93 79.6
Mapoly0033s0089 Marchantia polymorpha HOM05D005761 ORTHO05D007286 1.2e-35 153.7 151 51.7
HanXRQChr05g0136521 Helianthus annuus HOM05D005761 ORTHO05D007286 4.6e-35 151.8 93 76.3
Sed0020064 Sechium edule HOM05D005761 ORTHO05D007286 7.8e-35 151.0 99 76.8
HanXRQChr10g0301331 Helianthus annuus HOM05D005761 ORTHO05D007286 3.1e-31 139.0 87 75.9
CBR_g32010 Chara braunii HOM05D005761 ORTHO05D007286 1.7e-29 133.3 150 44.0
Sopen03g039470 Solanum pennellii HOM05D005761 ORTHO05D007286 6.6e-26 121.3 77 71.4
HanXRQChr11g0333491 Helianthus annuus HOM05D005761 ORTHO05D007286 6.8e-23 111.3 124 48.4
HanXRQChr08g0232791 Helianthus annuus HOM05D005761 ORTHO05D007286 2.0e-22 109.8 124 48.4
Rhsim08G0224100 Rhododendron simsii HOM05D000414 ORTHO05D000276 4.4e-14 82.0 50 80.0
Rhsim08G0203300 Rhododendron simsii HOM05D005761 ORTHO05D007286 6.4e-13 78.2 48 72.9


User provided reference genes

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