Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 6.1e-307 1056.6 508 100.0
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 2.8e-272 941.4 512 86.7
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 2.5e-260 901.7 502 84.5
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 1.1e-252 876.3 499 82.4
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 5.4e-247 857.4 501 79.8
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.8e-243 845.1 501 78.6
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 1.4e-242 842.8 501 78.4
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.1e-242 841.6 503 78.5
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.2e-241 839.7 503 78.3
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.0e-241 839.0 503 78.3
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 5.8e-241 837.4 501 78.0
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 4.1e-239 831.2 509 75.8
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 7.1e-239 830.5 501 77.6
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 1.1e-236 823.2 490 77.6
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 1.9e-236 822.4 493 77.7
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 2.5e-236 822.0 505 77.0
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 5.6e-236 820.8 512 77.0
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 9.5e-236 820.1 506 76.1
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 2.1e-235 818.9 499 76.2
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 3.6e-235 818.1 505 76.8
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 4.7e-235 817.8 506 75.7
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-234 816.2 506 75.5
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-234 816.2 506 75.5
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.8e-234 815.8 506 75.7
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 5.8e-233 810.8 509 76.2
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 2.2e-232 808.9 501 74.7
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 2.9e-232 808.5 502 75.7
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 6.4e-232 807.4 518 73.9
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 6.4e-232 807.4 505 75.2
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 1.4e-231 806.2 501 75.6
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 4.2e-231 804.7 503 75.1
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 2.7e-230 802.0 507 74.6
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 4.6e-230 801.2 493 76.3
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 1.1e-228 796.6 502 75.7
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 1.6e-227 792.7 509 72.9
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 2.8e-227 792.0 500 74.2
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 6.2e-227 790.8 505 73.9
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 6.2e-227 790.8 502 75.3
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 2.4e-226 788.9 534 70.8
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 2.0e-225 785.8 508 75.0
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.0e-225 785.8 510 74.1
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 3.4e-225 785.0 502 75.1
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 1.7e-224 782.7 499 72.1
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 2.9e-224 781.9 519 72.8
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 3.8e-224 781.6 504 73.8
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 4.9e-224 781.2 499 71.5
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 8.4e-224 780.4 487 76.0
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 2.4e-223 778.9 508 72.4
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 4.2e-223 778.1 493 71.8
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 5.4e-223 777.7 497 72.2
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 9.3e-223 776.9 498 72.1
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 2.7e-222 775.4 500 72.4
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 2.7e-222 775.4 488 73.8
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 1.0e-221 773.5 499 71.5
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 1.7e-221 772.7 500 71.4
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 1.7e-221 772.7 513 72.5
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 3.9e-221 771.5 504 74.4
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.1e-220 770.0 507 71.6
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 1.5e-220 769.6 503 71.2
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 3.3e-220 768.5 503 71.0
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 4.3e-220 768.1 502 72.9
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 2.8e-219 765.4 517 71.8
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 6.2e-219 764.2 509 69.9
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 1.4e-218 763.1 504 71.0
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 4.0e-218 761.5 503 71.0
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 1.5e-217 759.6 492 74.0
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 1.5e-217 759.6 492 74.0
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 2.6e-217 758.8 503 71.0
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 2.6e-217 758.8 503 71.0
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 2.9e-216 755.4 501 70.3
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 3.8e-216 755.0 517 69.4
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 1.1e-215 753.4 489 73.4
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 1.9e-215 752.7 502 72.3
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 2.4e-215 752.3 481 73.4
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 3.2e-215 751.9 505 71.1
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 3.2e-215 751.9 572 65.6
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 9.0e-210 733.8 503 68.8
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 9.0e-210 733.8 523 67.5
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 1.2e-209 733.4 519 67.8
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 3.2e-207 725.3 525 66.1
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 9.3e-207 723.8 507 69.4
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 3.9e-205 718.4 449 74.6
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 5.1e-205 718.0 509 67.0
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 6.7e-205 717.6 499 68.5
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 9.6e-204 713.8 516 65.9
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 4.8e-203 711.4 516 65.3
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 9.3e-199 697.2 498 68.3
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 1.8e-189 666.4 479 65.8
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 3.9e-189 665.2 492 66.5
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 6.7e-189 664.5 518 62.7
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 5.7e-188 661.4 432 73.4
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.8e-186 656.4 516 63.2
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 3.1e-186 655.6 501 66.3
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 1.5e-185 653.3 515 61.6
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 5.9e-185 651.4 502 64.9
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 5.5e-183 644.8 455 67.0
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 4.4e-180 635.2 486 62.1
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 3.7e-179 632.1 517 61.7
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 6.3e-179 631.3 512 60.7
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 8.5e-176 620.9 353 81.0
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 3.1e-170 602.4 419 69.5
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 4.0e-165 585.5 410 69.0
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 4.1e-122 442.6 416 52.9
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 2.1e-121 440.3 262 75.2
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 7.8e-121 438.3 389 54.0
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 1.4e-117 427.6 468 47.4
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 3.4e-116 422.9 381 54.1
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 3.1e-109 399.8 392 48.7
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 2.7e-73 280.4 172 74.4
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 3.0e-64 250.4 162 69.1
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 5.2e-56 223.0 120 85.0
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 1.1e-37 162.2 112 70.5
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 5.4e-37 159.8 122 63.1
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 2.8e-33 147.5 306 31.0
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 3.7e-22 110.5 88 53.4
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 5.2e-16 90.1 78 56.4
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 5.2e-16 90.1 78 56.4
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 5.2e-16 90.1 78 56.4
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 7.5e-15 86.3 56 67.9
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 1.8e-08 65.1 99 35.4
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 4.0e-08 63.9 58 37.9
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 1.3e-06 58.9 99 30.3


User provided reference genes

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