Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000249 Sechium edule HOM05D004373 ORTHO05D005203 1.6e-152 542.7 277 100.0
Sed0027414 Sechium edule HOM05D004373 ORTHO05D005203 1.2e-120 436.8 268 83.2
MELO3C019708.2 Cucumis melo HOM05D004373 ORTHO05D005203 3.1e-111 405.6 269 79.2
ClCG02G018260 Citrullus lanatus HOM05D004373 ORTHO05D005203 4.0e-111 405.2 268 80.2
CsaV3_6G015650 Cucumis sativus L. HOM05D004373 ORTHO05D005203 8.9e-111 404.1 269 78.8
Hma1.2p1_0178F.1_g078200 Hydrangea macrophylla HOM05D004373 ORTHO05D005203 4.0e-87 325.5 270 63.3
FvH4_6g37760 Fragaria vesca HOM05D004373 ORTHO05D005203 1.3e-85 320.5 186 82.8
RcHm_v2.0_Chr2g0150821 Rosa chinensis HOM05D004373 ORTHO05D005203 1.3e-85 320.5 186 82.3
RcHm_v2.0_Chr4g0446711 Rosa chinensis HOM05D004373 ORTHO05D005203 2.9e-85 319.3 214 75.2
FAN14G0255 Fragaria x ananassa HOM05D004373 ORTHO05D005203 4.9e-85 318.5 186 82.3
Cc05_g09170 Coffea canephora HOM05D004373 ORTHO05D005203 6.4e-85 318.2 270 61.5
FAN05G3369 Fragaria x ananassa HOM05D004373 ORTHO05D005203 6.4e-85 318.2 185 82.7
Eucgr.D00004 Eucalyptus grandis HOM05D004373 ORTHO05D005203 8.4e-85 317.8 233 70.4
CiPaw.03G195500 Carya illinoinensis HOM05D004373 ORTHO05D005203 1.1e-84 317.4 235 67.2
Lsat_1_v5_gn_8_31981 Lactuca sativa HOM05D004373 ORTHO05D005203 1.1e-84 317.4 186 82.3
Dinv12714 Davidia involucrata HOM05D004373 ORTHO05D005203 3.2e-84 315.8 239 66.5
Solyc07g055850.4 Solanum lycopersicum HOM05D004373 ORTHO05D005203 3.2e-84 315.8 185 80.5
Sopen07g029220 Solanum pennellii HOM05D004373 ORTHO05D005203 3.2e-84 315.8 185 80.5
Carub.0004s1212 Capsella rubella HOM05D004373 ORTHO05D005203 5.4e-84 315.1 270 62.6
AUR62041333 Chenopodium quinoa HOM05D004373 ORTHO05D005203 1.2e-83 313.9 201 74.6
Prupe.3G169300 Prunus persica HOM05D004373 ORTHO05D005203 2.7e-83 312.8 186 80.6
Thecc.01G158800 Theobroma cacao HOM05D004373 ORTHO05D005203 3.5e-83 312.4 237 67.9
A04p23610 Brassica napus HOM05D004373 ORTHO05D005203 7.9e-83 311.2 248 66.1
THA.LOC104800821 Tarenaya hassleriana HOM05D004373 ORTHO05D005203 7.9e-83 311.2 193 77.7
AT2G30920 Arabidopsis thaliana HOM05D004373 ORTHO05D005203 1.3e-82 310.5 271 60.9
Ah.01g016050 Amaranthus hybridus HOM05D004373 ORTHO05D005203 1.7e-82 310.1 233 69.5
Peaxi162Scf00154g00813 Petunia axillaris HOM05D004373 ORTHO05D005203 2.3e-82 309.7 231 67.1
EL10Ac9g21021 Beta vulgaris HOM05D004373 ORTHO05D005203 3.0e-82 309.3 222 69.8
BcaB06g28458 Brassica carinata HOM05D004373 ORTHO05D005203 3.0e-82 309.3 245 64.1
CAN.G1481.10 Capsicum annuum HOM05D004373 ORTHO05D005203 3.9e-82 308.9 182 80.2
CARHR124420 Cardamine hirsuta HOM05D004373 ORTHO05D005203 5.1e-82 308.5 215 70.2
Haze_13471 Corylus avellana HOM05D004373 ORTHO05D005203 5.1e-82 308.5 222 68.5
ECA233G5691 Erigeron canadensis HOM05D004373 ORTHO05D005203 5.1e-82 308.5 245 66.1
Os06g0152300 Oryza sativa ssp. japonica HOM05D004373 ORTHO05D005203 5.1e-82 308.5 192 78.6
C04p60040 Brassica napus HOM05D004373 ORTHO05D005203 6.6e-82 308.1 245 63.7
QL07p014019 Quercus lobata HOM05D004373 ORTHO05D005203 6.6e-82 308.1 215 71.2
Gohir.D01G165500 Gossypium hirsutum HOM05D004373 ORTHO05D005203 8.7e-82 307.8 204 73.5
Gorai.002G205900 Gossypium raimondii HOM05D004373 ORTHO05D005203 8.7e-82 307.8 204 73.5
Ciclev10017823m.g Citrus clementina HOM05D004373 ORTHO05D005203 1.1e-81 307.4 231 67.1
Sp4g13390 Schrenkiella parvula HOM05D004373 ORTHO05D005203 1.1e-81 307.4 266 61.7
Aqoxy1G01913 Aquilegia oxysepala HOM05D004373 ORTHO05D005203 1.5e-81 307.0 190 75.3
PGR042G0892 Punica granatum HOM05D004373 ORTHO05D005203 1.5e-81 307.0 186 80.6
FAN02G0860 Fragaria x ananassa HOM05D004373 ORTHO05D005203 1.9e-81 306.6 209 73.7
MD17G1142800 Malus domestica HOM05D004373 ORTHO05D005203 1.9e-81 306.6 185 79.5
HanXRQChr10g0305621 Helianthus annuus HOM05D004373 ORTHO05D005203 2.5e-81 306.2 239 66.9
HanXRQChr13g0386831 Helianthus annuus HOM05D004373 ORTHO05D005203 3.3e-81 305.8 186 79.6
Ca_06293_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 5.6e-81 305.1 261 60.9
DCAR_013302 Daucus carota HOM05D004373 ORTHO05D005203 5.6e-81 305.1 220 67.3
TPR.G12597 Trifolium pratense HOM05D004373 ORTHO05D005203 5.6e-81 305.1 261 61.7
Thhalv10016964m.g Eutrema salsugineum HOM05D004373 ORTHO05D005203 7.4e-81 304.7 234 65.8
ATR0213G014 Amborella trichopoda HOM05D004373 ORTHO05D005203 9.6e-81 304.3 190 78.4
Gohir.A01G174300 Gossypium hirsutum HOM05D004373 ORTHO05D005203 9.6e-81 304.3 237 67.5
Nn3g21008 Nelumbo nucifera HOM05D004373 ORTHO05D005203 9.6e-81 304.3 222 68.9
Potri.014G093100 Populus trichocarpa HOM05D004373 ORTHO05D005203 9.6e-81 304.3 189 77.2
Aa31LG5G6000 Aethionema arabicum HOM05D004373 ORTHO05D005203 1.3e-80 303.9 243 65.8
CSS0005427 Camellia sinensis var. sinensis HOM05D004373 ORTHO05D005203 1.3e-80 303.9 247 63.2
CANSAT64G2747 Cannabis sativa HOM05D004373 ORTHO05D005203 1.3e-80 303.9 225 68.9
Migut.M00217 Erythranthe guttata HOM05D004373 ORTHO05D005203 1.3e-80 303.9 226 66.8
AL4G25860 Arabidopsis lyrata HOM05D004373 ORTHO05D005203 1.6e-80 303.5 270 60.0
Lj2g0023469 Lotus japonicus HOM05D004373 ORTHO05D005203 1.6e-80 303.5 184 76.6
MD09G1156300 Malus domestica HOM05D004373 ORTHO05D005203 1.6e-80 303.5 228 69.7
TWI60G0341 Tripterygium wilfordii HOM05D004373 ORTHO05D005203 1.6e-80 303.5 208 68.8
VMungo0647G0741 Vigna mungo HOM05D004373 ORTHO05D005203 1.6e-80 303.5 268 59.0
BcaB02g10348 Brassica carinata HOM05D004373 ORTHO05D005203 2.1e-80 303.1 246 63.4
HanXRQChr12g0367481 Helianthus annuus HOM05D004373 ORTHO05D005203 2.1e-80 303.1 188 77.1
Lalb_Chr10g0106811 Lupinus albus HOM05D004373 ORTHO05D005203 2.8e-80 302.8 190 76.3
arahy.Tifrunner.gnm1.ann1.GN05X3 Arachis hypogaea HOM05D004373 ORTHO05D005203 1.4e-79 300.4 186 78.0
arahy.Tifrunner.gnm1.ann1.JRDS1A Arachis hypogaea HOM05D004373 ORTHO05D005203 1.4e-79 300.4 213 72.3
Medtr5g091910 Medicago truncatula HOM05D004373 ORTHO05D005203 1.4e-79 300.4 264 58.7
Actinidia11187 Actinidia chinensis HOM05D004373 ORTHO05D005203 1.8e-79 300.1 250 61.2
LjContig00222g0009609 Lotus japonicus HOM05D004373 ORTHO05D005203 2.4e-79 299.7 191 74.3
Manes.12G048800 Manihot esculenta HOM05D004373 ORTHO05D005203 4.0e-79 298.9 186 76.3
Atru.chr6.3556 Acer truncatum HOM05D004373 ORTHO05D005203 5.3e-79 298.5 233 67.4
BraA04t17887Z Brassica rapa HOM05D004373 ORTHO05D005203 9.0e-79 297.7 266 60.9
SalBow7G3596 Salvia bowleyana HOM05D004373 ORTHO05D005203 9.0e-79 297.7 191 73.3
COL.COLO4_33707 Corchorus olitorius HOM05D004373 ORTHO05D005203 1.5e-78 297.0 213 70.4
Phvul.008G264200 Phaseolus vulgaris HOM05D004373 ORTHO05D005203 1.5e-78 297.0 261 60.9
Glyma.02G288400 Glycine max HOM05D004373 ORTHO05D005203 2.0e-78 296.6 184 76.1
PSO675G5443 Papaver somniferum HOM05D004373 ORTHO05D005203 7.6e-78 294.7 249 61.4
Glyma.14G026600 Glycine max HOM05D004373 ORTHO05D005203 9.9e-78 294.3 261 59.4
Zm00001eb348020 Zea mays HOM05D004373 ORTHO05D005203 1.7e-77 293.5 186 75.8
Zm00001eb376720 Zea mays HOM05D004373 ORTHO05D005203 1.7e-77 293.5 186 75.8
MSTRG.6768 Avicennia marina HOM05D004373 ORTHO05D005203 3.8e-77 292.4 190 71.6
Psat2g014440 Pisum sativum HOM05D004373 ORTHO05D005203 8.4e-77 291.2 261 59.4
PSO541G0058 Papaver somniferum HOM05D004373 ORTHO05D005203 1.1e-76 290.8 253 59.7
Zm00001eb347960 Zea mays HOM05D004373 ORTHO05D005203 1.1e-76 290.8 183 76.0
unitig_747.g21614 Utricularia gibba HOM05D004373 ORTHO05D005203 9.3e-76 287.7 209 67.9
MBI06_g08521_MAGBIO Magnolia biondii HOM05D004373 ORTHO05D005203 3.0e-74 282.7 218 66.5
HPP92_000569 Vanilla planifolia HOM05D004373 ORTHO05D005203 3.3e-73 279.3 234 61.5
CDE02G2202 Ceratophyllum demersum HOM05D004373 ORTHO05D005203 1.6e-72 276.9 218 63.3
FAN09G0397 Fragaria x ananassa HOM05D003004 ORTHO05D003860 1.6e-72 276.9 214 67.8
Lj6A610T47 Lonicera japonica HOM05D004373 ORTHO05D005203 2.1e-72 276.6 168 77.4
Manes.16G042550 Manihot esculenta HOM05D004373 ORTHO05D005203 1.4e-71 273.9 225 63.1
SGA_v2.0_scaffold265G46119 Striga asiatica HOM05D004373 ORTHO05D005203 1.5e-70 270.4 244 58.2
Sabra14G0067500 Salix brachista HOM05D004373 ORTHO05D005203 2.2e-69 266.5 227 61.2
RcHm_v2.0_Chr7g0218911 Rosa chinensis HOM05D004373 ORTHO05D005203 3.5e-67 259.2 156 80.1
SGA_v2.0_scaffold34G13681 Striga asiatica HOM05D004373 ORTHO05D005203 1.0e-66 257.7 225 61.8
Sabra14G0069300 Salix brachista HOM05D004373 ORTHO05D005203 1.3e-66 257.3 339 46.6
Hund00826 Selenicereus undatus HOM05D004373 ORTHO05D005203 1.5e-65 253.8 270 51.9
BcaB06g28393 Brassica carinata HOM05D004373 ORTHO05D005203 1.9e-65 253.4 243 56.8
vmacro12435 Vaccinium macrocarpon HOM05D004373 ORTHO05D005203 5.7e-65 251.9 208 62.0
Duzib147G0031 Durio zibethinus HOM05D004373 ORTHO05D005203 3.7e-64 249.2 237 57.8
AagrBONN_evm.TU.Sc2ySwM_228.3026 Anthoceros agrestis HOM05D004373 ORTHO05D005203 1.8e-63 246.9 193 60.6
CARHR124890 Cardamine hirsuta HOM05D004373 ORTHO05D005203 1.2e-62 244.2 156 72.4
Nitab4.5_0001121g0130 Nicotiana tabacum HOM05D004373 ORTHO05D005203 5.9e-62 241.9 185 63.8
Pp3c16_12920 Physcomitrium patens HOM05D004373 ORTHO05D005203 5.9e-62 241.9 231 52.4
Gorai.002G206300 Gossypium raimondii HOM05D004373 ORTHO05D005203 1.3e-61 240.7 177 67.8
Rhsim06G0122100 Rhododendron simsii HOM05D004373 ORTHO05D005203 7.2e-60 235.0 337 43.3
Manes.17G059600 Manihot esculenta HOM05D004373 ORTHO05D005203 9.0e-55 218.0 213 57.7
SGA_v2.0_scaffold34G13678 Striga asiatica HOM05D004373 ORTHO05D005203 3.8e-53 212.6 154 68.8
CBR_g50290 Chara braunii HOM05D004373 ORTHO05D005203 2.5e-52 209.9 227 49.8
Gohir.D01G165850 Gossypium hirsutum HOM05D004373 ORTHO05D005203 9.4e-52 208.0 161 65.2
Hund07740 Selenicereus undatus HOM05D004373 ORTHO05D005203 7.9e-51 204.9 200 57.5
SMO115G0194 Selaginella moellendorffii HOM05D004373 ORTHO05D005203 2.8e-48 196.4 156 60.3
Os06g0152400 Oryza sativa ssp. japonica HOM05D004373 ORTHO05D005203 6.3e-48 195.3 196 53.6
MCO09G686 Micromonas commoda HOM05D004373 ORTHO05D005203 2.6e-46 189.9 182 55.5
QL08p043446 Quercus lobata HOM05D004373 ORTHO05D005203 1.2e-43 181.0 110 77.3
Haze_26971 Corylus avellana HOM05D004373 ORTHO05D005203 2.7e-43 179.9 195 44.6
GSVIVG01003298001 Vitis vinifera HOM05D004373 ORTHO05D005203 3.6e-43 179.5 107 74.8
Cfa021389 Carpinus fangiana HOM05D003004 ORTHO05D003860 1.8e-42 177.2 112 77.7
Nitab4.5_0002737g0030 Nicotiana tabacum HOM05D004373 ORTHO05D005203 3.0e-42 176.4 101 76.2
PRCOL_00002744 Prasinoderma coloniale HOM05D004373 ORTHO05D005203 5.2e-42 175.6 195 44.6
QL07p048830 Quercus lobata HOM05D004373 ORTHO05D005203 2.6e-41 173.3 168 55.4
BcaC02g11171 Brassica carinata HOM05D004373 ORTHO05D005203 1.8e-39 167.2 154 58.4
Sc12g0003760 Simmondsia chinensis HOM05D004373 ORTHO05D005203 7.0e-39 165.2 106 75.5
Zm00001eb348030 Zea mays HOM05D004373 ORTHO05D005203 1.2e-38 164.5 118 69.5
Cre10.g423750 Chlamydomonas reinhardtii HOM05D004373 ORTHO05D005203 3.5e-38 162.9 180 47.8
Actinidia12819 Actinidia chinensis HOM05D003004 ORTHO05D005203 2.1e-35 153.7 108 70.4
Zm00001eb347990 Zea mays HOM05D004373 ORTHO05D005203 8.0e-35 151.8 106 70.8
Mapoly0024s0082 Marchantia polymorpha HOM05D004373 ORTHO05D005203 1.0e-34 151.4 143 53.1
SEGI_21332 Sequoiadendron giganteum HOM05D004373 ORTHO05D005203 7.5e-33 145.2 82 76.8
TAR626G1796 Trochodendron aralioides HOM05D004034 ORTHO05D004210 1.1e-31 141.4 102 65.7
Ca_29372_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 1.0e-29 134.8 182 42.3
TAR626G1318 Trochodendron aralioides HOM05D004373 ORTHO05D005203 2.2e-29 133.7 83 78.3
Zm00001eb348170 Zea mays HOM05D004373 ORTHO05D005203 2.9e-29 133.3 76 78.9
Haze_27054 Corylus avellana HOM05D004373 ORTHO05D005203 4.2e-28 129.4 179 43.0
Cfa026944 Carpinus fangiana HOM05D001144 ORTHO05D125916 2.1e-27 127.1 199 38.2
SGA_v2.0_scaffold425G51480 Striga asiatica HOM05D004373 ORTHO05D005203 3.4e-25 119.8 193 40.4
Gohir.A01G174700 Gossypium hirsutum HOM05D004373 ORTHO05D005203 1.3e-24 117.9 81 74.1
HPP92_000565 Vanilla planifolia HOM05D004373 ORTHO05D005203 2.7e-22 110.2 79 67.1
C04p19740 Brassica napus HOM05D004373 ORTHO05D005203 1.0e-21 108.2 93 59.1
CSS0011448 Camellia sinensis var. sinensis HOM05D004373 ORTHO05D005203 1.3e-21 107.8 56 78.6
Zm00001eb348180 Zea mays HOM05D004373 ORTHO05D005203 1.1e-20 104.8 73 69.9
BolC4t23507H Brassica oleracea HOM05D004373 ORTHO05D005203 1.4e-18 97.8 70 68.6
C04p19750 Brassica napus HOM05D004373 ORTHO05D005203 2.3e-18 97.1 66 69.7
BolC4t23508H Brassica oleracea HOM05D004373 ORTHO05D005203 2.3e-18 97.1 66 69.7
Actinidia28382 Actinidia chinensis HOM05D004373 ORTHO05D005203 4.0e-18 96.3 88 51.1
GSVIVG01003300001 Vitis vinifera HOM05D004373 ORTHO05D005203 5.7e-17 92.4 59 79.7
Oeu025155.1 Olea europaea HOM05D004373 ORTHO05D005203 1.1e-15 88.2 137 40.9
RcHm_v2.0_Chr4g0436731 Rosa chinensis HOM05D004373 ORTHO05D005203 1.4e-15 87.8 47 80.9
AUR62024008 Chenopodium quinoa HOM05D004373 ORTHO05D005203 2.4e-15 87.0 53 79.2
Cpa.g.sc50.65 Carica papaya HOM05D004373 ORTHO05D005203 5.9e-14 82.4 78 55.1
BcaC02g11170 Brassica carinata HOM05D004373 ORTHO05D005203 7.7e-14 82.0 94 48.9
AL283U10040 Arabidopsis lyrata HOM05D004373 ORTHO05D005203 1.7e-13 80.9 52 69.2
CSS0023039 Camellia sinensis var. sinensis HOM05D004373 ORTHO05D005203 3.3e-12 76.6 114 36.8
BraA05t20404Z Brassica rapa HOM05D004373 ORTHO05D005203 1.4e-07 61.2 45 60.0
Zm00001eb348000 Zea mays HOM05D004373 ORTHO05D005203 5.4e-07 59.3 76 46.1
Zm00001eb347980 Zea mays HOM05D004373 ORTHO05D005203 1.2e-06 58.2 76 44.7
Nitab4.5_0002737g0010 Nicotiana tabacum HOM05D004373 ORTHO05D005203 7.8e-06 55.5 36 69.4


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