Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 2.0e-83 312.8 206 100.0
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 5.9e-59 231.5 172 77.3
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 2.9e-58 229.2 168 76.2
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 5.0e-58 228.4 168 74.4
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 1.5e-46 190.3 168 65.5
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 2.6e-46 189.5 172 59.3
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 3.7e-45 185.7 168 57.1
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 4.8e-45 185.3 168 56.0
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 4.1e-44 182.2 166 61.4
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 5.3e-44 181.8 164 65.9
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 1.2e-43 180.6 167 58.1
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 2.7e-43 179.5 164 59.8
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 4.5e-43 178.7 179 63.1
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 5.9e-43 178.3 168 55.4
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 7.7e-43 177.9 169 65.1
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 1.0e-42 177.6 174 58.6
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 1.0e-42 177.6 169 59.2
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 1.0e-42 177.6 169 56.2
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 1.3e-42 177.2 158 60.1
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 1.3e-42 177.2 163 58.3
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 2.2e-42 176.4 163 56.4
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 2.2e-42 176.4 169 57.4
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 2.2e-42 176.4 166 58.4
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 8.5e-42 174.5 163 57.1
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.1e-41 174.1 161 57.8
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 1.5e-41 173.7 163 59.5
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 3.2e-41 172.6 168 57.1
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 5.5e-41 171.8 170 55.9
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 1.6e-40 170.2 172 55.2
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 2.1e-40 169.9 173 53.8
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 1.0e-39 167.5 171 55.0
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.4e-39 167.2 167 60.5
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 1.4e-39 167.2 170 55.3
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 1.4e-39 167.2 167 61.7
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 1.8e-39 166.8 152 57.9
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 3.0e-39 166.0 173 53.2
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 3.0e-39 166.0 166 54.2
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 5.2e-39 165.2 158 55.7
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 8.8e-39 164.5 159 55.3
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 1.2e-38 164.1 171 52.0
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 1.2e-38 164.1 172 51.7
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.5e-38 163.7 168 52.4
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.5e-38 163.7 168 52.4
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.5e-38 163.7 168 52.4
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 2.0e-38 163.3 167 61.1
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 2.0e-38 163.3 164 53.7
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 2.6e-38 162.9 162 54.3
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 7.5e-38 161.4 154 57.1
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 7.5e-38 161.4 166 54.8
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.3e-37 160.6 168 51.2
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 1.3e-37 160.6 163 61.3
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 2.8e-37 159.5 93 76.3
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 4.8e-37 158.7 170 51.8
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 6.3e-37 158.3 177 51.4
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 1.1e-36 157.5 93 75.3
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 1.4e-36 157.1 168 56.0
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.4e-36 157.1 168 56.0
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 1.8e-36 156.8 171 54.4
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 2.4e-36 156.4 153 53.6
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 3.1e-36 156.0 107 68.2
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 4.1e-36 155.6 109 68.8
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 5.4e-36 155.2 175 48.6
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 5.4e-36 155.2 93 74.2
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 1.2e-35 154.1 93 75.3
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.2e-35 154.1 164 49.4
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 3.5e-35 152.5 221 46.6
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 4.5e-35 152.1 93 74.2
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 5.9e-35 151.8 93 73.1
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 5.9e-35 151.8 93 73.1
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 5.9e-35 151.8 93 73.1
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 1.7e-34 150.2 171 50.9
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 1.7e-34 150.2 114 65.8
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 6.5e-34 148.3 161 56.5
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 1.5e-33 147.1 203 51.7
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 2.5e-33 146.4 170 47.1
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 3.3e-33 146.0 177 52.5
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 3.3e-33 146.0 177 52.5
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 3.3e-33 146.0 173 59.0
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 3.3e-33 146.0 173 59.0
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 4.2e-33 145.6 184 47.3
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 4.2e-33 145.6 187 46.5
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 4.2e-33 145.6 173 48.6
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 4.2e-33 145.6 170 46.5
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 7.2e-33 144.8 174 48.3
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 7.2e-33 144.8 174 48.3
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 7.2e-33 144.8 174 48.3
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 7.2e-33 144.8 175 49.1
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 7.2e-33 144.8 175 49.1
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 9.5e-33 144.4 156 58.3
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 1.6e-32 143.7 178 46.6
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 2.1e-32 143.3 174 47.7
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 2.8e-32 142.9 103 68.0
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 3.6e-32 142.5 175 47.4
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 6.1e-32 141.7 103 68.0
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 8.0e-32 141.4 179 57.5
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 8.0e-32 141.4 173 59.0
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 3.0e-31 139.4 180 50.6
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 4.0e-31 139.0 185 46.5
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 6.8e-31 138.3 123 56.9
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 4.9e-29 132.1 219 39.7
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 8.3e-29 131.3 94 68.1
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 8.3e-29 131.3 94 68.1
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 8.3e-29 131.3 94 68.1
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 1.6e-27 127.1 90 65.6
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 7.8e-27 124.8 106 53.8
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 5.0e-26 122.1 166 45.2
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 1.1e-25 120.9 90 63.3
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 1.2e-24 117.5 169 42.6
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 3.6e-24 115.9 89 60.7
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 4.7e-24 115.5 89 59.6
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 1.0e-23 114.4 86 62.8
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.8e-23 113.6 138 46.4
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 3.4e-22 109.4 168 43.5
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 1.3e-21 107.5 162 40.7
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 7.0e-20 101.7 63 68.3
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 1.1e-17 94.4 91 45.1
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 1.2e-16 90.9 58 74.1
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 1.2e-16 90.9 58 74.1
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 3.1e-15 86.3 87 49.4
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 3.1e-15 86.3 87 49.4
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 1.2e-14 84.3 69 65.2
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 4.4e-14 82.4 98 46.9
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 1.4e-12 77.4 107 54.2
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 5.0e-10 68.9 77 42.9
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 2.5e-09 66.6 69 46.4
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 9.5e-09 64.7 37 64.9
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 2.1e-08 63.5 105 36.2
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 1.1e-07 61.2 106 33.0
Glyma.09G185300 Glycine max HOM05D005829 ORTHO05D007246 5.2e-07 58.9 112 33.9
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 1.2e-06 57.8 65 49.2
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 1.5e-06 57.4 36 63.9


User provided reference genes

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