Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000150 Sechium edule HOM05D014059 ORTHO05D019015 9.0e-102 373.6 194 100.0
Sed0007909 Sechium edule HOM05D014059 ORTHO05D019015 8.5e-68 260.8 194 70.6
MELO3C014059.2 Cucumis melo HOM05D014059 ORTHO05D001526 2.0e-24 116.7 194 42.3
CsaV3_3G003770 Cucumis sativus L. HOM05D014059 ORTHO05D001526 5.8e-24 115.2 194 36.1
ClCG10G003920 Citrullus lanatus HOM05D014059 ORTHO05D019015 4.6e-21 105.5 216 37.5
CAN.G623.74 Capsicum annuum HOM05D008543 ORTHO05D000630 6.6e-20 101.7 200 35.5
PGSC0003DMG400022147 Solanum tuberosum HOM05D008543 ORTHO05D000630 1.5e-16 90.5 240 30.8
ClCG10G003810 Citrullus lanatus HOM05D014059 ORTHO05D019015 2.6e-16 89.7 177 36.7
Nitab4.5_0009408g0010 Nicotiana tabacum HOM05D008543 ORTHO05D000630 4.4e-16 89.0 271 28.0
CANSAT54G2384 Cannabis sativa HOM05D008543 ORTHO05D000630 7.1e-14 81.6 182 34.6
THA.LOC104817725 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 1.2e-13 80.9 193 32.6
Peaxi162Scf00232g00062 Petunia axillaris HOM05D008543 ORTHO05D000630 4.6e-13 79.0 207 30.4
Nitab4.5_0000152g0060 Nicotiana tabacum HOM05D008543 ORTHO05D000630 7.8e-13 78.2 304 25.7
GSVIVG01014844001 Vitis vinifera HOM05D000174 ORTHO05D000630 8.7e-12 74.7 211 27.5
Eucgr.I01518 Eucalyptus grandis HOM05D000174 ORTHO05D001526 1.1e-11 74.3 153 32.0
SGA_v2.0_scaffold79G25559 Striga asiatica HOM05D011325 ORTHO05D000630 1.9e-11 73.6 219 29.7
HanXRQChr13g0409261 Helianthus annuus HOM05D000174 ORTHO05D000630 2.5e-11 73.2 198 30.3
Nitab4.5_0000205g0040 Nicotiana tabacum HOM05D059491 ORTHO05D000630 4.3e-11 72.4 316 25.6
Sopen07g034340 Solanum pennellii HOM05D011325 ORTHO05D000630 7.3e-11 71.6 289 26.6
Cc05_g15710 Coffea canephora HOM05D000174 ORTHO05D000630 2.1e-10 70.1 230 27.4
Solyc07g066160.1 Solanum lycopersicum HOM05D011325 ORTHO05D000630 2.1e-10 70.1 289 27.3
ECA246G3372 Erigeron canadensis HOM05D000174 ORTHO05D001526 6.2e-10 68.6 170 28.8
Oeu052885.1 Olea europaea HOM05D008543 ORTHO05D000630 6.2e-10 68.6 300 26.0
Dinv40916 Davidia involucrata HOM05D008543 ORTHO05D000630 8.1e-10 68.2 320 23.4
SGA_v2.0_scaffold79G25561 Striga asiatica HOM05D011325 ORTHO05D000630 8.1e-10 68.2 240 28.3
Manes.08G058500 Manihot esculenta HOM05D000174 ORTHO05D001526 1.4e-09 67.4 150 31.3
arahy.Tifrunner.gnm1.ann1.PC1F1T Arachis hypogaea HOM05D000174 ORTHO05D001526 1.8e-09 67.0 206 25.7
HanXRQChr17g0543991 Helianthus annuus HOM05D000174 ORTHO05D001526 1.8e-09 67.0 157 35.7
Oeu006263.1 Olea europaea HOM05D008543 ORTHO05D000630 1.8e-09 67.0 329 24.3
Haze_02015 Corylus avellana HOM05D000174 ORTHO05D001526 3.1e-09 66.2 161 28.0
CsaV3_3G003790 Cucumis sativus L. HOM05D014059 ORTHO05D019015 3.1e-09 66.2 164 31.7
SGA_v2.0_scaffold29G12183 Striga asiatica HOM05D035711 ORTHO05D037777 3.1e-09 66.2 158 33.5
PGSC0003DMG401000796 Solanum tuberosum HOM05D000174 ORTHO05D001526 4.0e-09 65.9 169 28.4
arahy.Tifrunner.gnm1.ann1.YK7I6N Arachis hypogaea HOM05D008543 ORTHO05D000630 5.3e-09 65.5 236 26.7
CAN.G175.1 Capsicum annuum HOM05D000174 ORTHO05D001526 6.9e-09 65.1 180 28.9
Ciclev10030233m.g Citrus clementina HOM05D000174 ORTHO05D001526 6.9e-09 65.1 150 30.7
Oeu032035.1 Olea europaea HOM05D011325 ORTHO05D000630 6.9e-09 65.1 216 26.9
TWI75G0649 Tripterygium wilfordii HOM05D008543 ORTHO05D000630 6.9e-09 65.1 237 27.4
Actinidia23303 Actinidia chinensis HOM05D000174 ORTHO05D000630 1.5e-08 63.9 187 26.2
arahy.Tifrunner.gnm1.ann1.1FA9DV Arachis hypogaea HOM05D008543 ORTHO05D000630 1.5e-08 63.9 245 25.3
arahy.Tifrunner.gnm1.ann1.DV6FW6 Arachis hypogaea HOM05D000174 ORTHO05D001526 1.5e-08 63.9 160 30.6
Oeu015527.1 Olea europaea HOM05D000174 ORTHO05D001526 1.5e-08 63.9 154 29.9
Oeu015529.1 Olea europaea HOM05D000174 ORTHO05D001526 1.5e-08 63.9 154 29.9
Actinidia03675 Actinidia chinensis HOM05D000174 ORTHO05D000630 2.0e-08 63.5 246 22.8
Sopen11g029860 Solanum pennellii HOM05D000174 ORTHO05D000630 2.0e-08 63.5 242 24.8
Potri.009G166200 Populus trichocarpa HOM05D000174 ORTHO05D001526 2.6e-08 63.2 161 29.2
Aqoxy4G02266 Aquilegia oxysepala HOM05D000174 ORTHO05D000630 3.4e-08 62.8 215 28.4
MD10G1139600 Malus domestica HOM05D000174 ORTHO05D001526 3.4e-08 62.8 160 26.2
PSO761G0216 Papaver somniferum HOM05D000174 ORTHO05D001526 3.4e-08 62.8 192 27.6
Nitab4.5_0000633g0100 Nicotiana tabacum HOM05D000174 ORTHO05D001526 4.5e-08 62.4 199 30.2
PSO017G6757 Papaver somniferum HOM05D000174 ORTHO05D001526 4.5e-08 62.4 195 26.2
DCAR_013757 Daucus carota HOM05D000174 ORTHO05D000630 5.8e-08 62.0 59 47.5
HanXRQChr03g0079361 Helianthus annuus HOM05D000174 ORTHO05D000630 5.8e-08 62.0 227 25.6
Nitab4.5_0000032g0420 Nicotiana tabacum HOM05D000174 ORTHO05D001526 5.8e-08 62.0 164 31.7
Oeu052027.2 Olea europaea HOM05D000784 ORTHO05D000116 5.8e-08 62.0 206 26.2
PGR142G1089 Punica granatum HOM05D000174 ORTHO05D001526 5.8e-08 62.0 163 28.8
THA.LOC104811702 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 5.8e-08 62.0 229 26.2
BcaC06g36226 Brassica carinata HOM05D000174 ORTHO05D001526 7.6e-08 61.6 158 29.7
BolC7t41045H Brassica oleracea HOM05D000174 ORTHO05D001526 7.6e-08 61.6 158 29.7
CANSAT56G1055 Cannabis sativa HOM05D000174 ORTHO05D001526 7.6e-08 61.6 150 29.3
PSO478G0578 Papaver somniferum HOM05D000174 ORTHO05D001526 7.6e-08 61.6 192 28.1
PGSC0003DMG400034376 Solanum tuberosum HOM05D000174 ORTHO05D000630 9.9e-08 61.2 237 24.1
Cpa.g.sc20.205 Carica papaya HOM05D000174 ORTHO05D001526 1.3e-07 60.8 160 27.5
Hma1.2p1_0032F.1_g018690 Hydrangea macrophylla HOM05D000174 ORTHO05D001526 1.3e-07 60.8 162 29.6
Nn6g31718 Nelumbo nucifera HOM05D000174 ORTHO05D001526 1.3e-07 60.8 154 29.9
Nitab4.5_0003570g0030 Nicotiana tabacum HOM05D008543 ORTHO05D000630 1.3e-07 60.8 56 53.6
Solyc06g060480.1 Solanum lycopersicum HOM05D000174 ORTHO05D001526 1.3e-07 60.8 169 29.6
ClCG00G001190 Citrullus lanatus HOM05D014059 ORTHO05D019015 1.7e-07 60.5 212 34.9
MD05G1134500 Malus domestica HOM05D000174 ORTHO05D001526 1.7e-07 60.5 160 30.0
Oeu025932.1 Olea europaea HOM05D011325 ORTHO05D000630 1.7e-07 60.5 215 24.7
Oeu051846.1 Olea europaea HOM05D001927 ORTHO05D001972 1.7e-07 60.5 152 28.9
Psat2g023640 Pisum sativum HOM05D000174 ORTHO05D001526 1.7e-07 60.5 152 33.6
Carub.0007s0502 Capsella rubella HOM05D000174 ORTHO05D001526 2.2e-07 60.1 166 28.3
Cpa.g.sc12.67 Carica papaya HOM05D000174 ORTHO05D000630 2.2e-07 60.1 95 38.9
unitig_578.g16756 Utricularia gibba HOM05D000174 ORTHO05D001526 2.2e-07 60.1 163 26.4
Migut.M01582 Erythranthe guttata HOM05D008543 ORTHO05D000630 2.9e-07 59.7 173 31.2
Thhalv10025912m.g Eutrema salsugineum HOM05D000174 ORTHO05D001526 2.9e-07 59.7 161 29.2
Potri.004G205300 Populus trichocarpa HOM05D000174 ORTHO05D001526 2.9e-07 59.7 150 28.7
Sabra04G0138600 Salix brachista HOM05D000174 ORTHO05D001526 2.9e-07 59.7 150 30.7
Peaxi162Scf00234g00042 Petunia axillaris HOM05D000174 ORTHO05D000630 3.8e-07 59.3 271 25.1
PGSC0003DMG400038709 Solanum tuberosum HOM05D000174 ORTHO05D001526 3.8e-07 59.3 191 27.7
BcaNung00612 Brassica carinata HOM05D000174 ORTHO05D001526 4.9e-07 58.9 167 28.7
Duzib248G0614 Durio zibethinus HOM05D000174 ORTHO05D001526 4.9e-07 58.9 168 27.4
Lalb_Chr22g0352391 Lupinus albus HOM05D000174 ORTHO05D001526 4.9e-07 58.9 150 28.0
Lalb_Chr22g0352401 Lupinus albus HOM05D000174 ORTHO05D001526 4.9e-07 58.9 150 28.0
Manes.04G008800 Manihot esculenta HOM05D000174 ORTHO05D001526 4.9e-07 58.9 160 32.5
Sp6g18050 Schrenkiella parvula HOM05D000174 ORTHO05D000630 4.9e-07 58.9 183 26.2
Sed0014639 Sechium edule HOM05D000174 ORTHO05D001526 4.9e-07 58.9 150 28.7
TAR625G1147 Trochodendron aralioides HOM05D000174 ORTHO05D001526 4.9e-07 58.9 152 28.3
TAR636G0894 Trochodendron aralioides HOM05D008543 ORTHO05D000630 4.9e-07 58.9 87 36.8
GSVIVG01037363001 Vitis vinifera HOM05D000174 ORTHO05D001526 4.9e-07 58.9 151 29.8
Sopen06g020600 Solanum pennellii HOM05D000174 ORTHO05D001526 6.4e-07 58.5 151 27.2
TWI75G1586 Tripterygium wilfordii HOM05D000174 ORTHO05D001526 6.4e-07 58.5 151 29.8
Aa31LG2G14820 Aethionema arabicum HOM05D000174 ORTHO05D001526 8.4e-07 58.2 167 26.3
BraA03t15420Z Brassica rapa HOM05D000174 ORTHO05D001526 8.4e-07 58.2 160 30.0
Dinv41879 Davidia involucrata HOM05D000174 ORTHO05D001526 1.1e-06 57.8 161 28.0
FAN21G0599 Fragaria x ananassa HOM05D000174 ORTHO05D000630 1.1e-06 57.8 280 28.2
FAN25G3117 Fragaria x ananassa HOM05D000174 ORTHO05D000630 1.1e-06 57.8 282 24.8
Gorai.002G206600 Gossypium raimondii HOM05D000174 ORTHO05D001526 1.1e-06 57.8 163 27.6
Manes.09G006400 Manihot esculenta HOM05D000174 ORTHO05D001526 1.1e-06 57.8 150 29.3
Peaxi162Scf00051g00034 Petunia axillaris HOM05D000174 ORTHO05D001526 1.1e-06 57.8 216 26.4
AT4G35280 Arabidopsis thaliana HOM05D000174 ORTHO05D001526 1.4e-06 57.4 169 29.0
ECA233G2259 Erigeron canadensis HOM05D000174 ORTHO05D001526 1.4e-06 57.4 163 26.4
Gohir.D01G166100 Gossypium hirsutum HOM05D000174 ORTHO05D001526 1.4e-06 57.4 163 27.6
Psat2g001240 Pisum sativum HOM05D000174 ORTHO05D001526 1.4e-06 57.4 151 29.1
RcHm_v2.0_Chr6g0280711 Rosa chinensis HOM05D000174 ORTHO05D001526 1.4e-06 57.4 161 26.7
Solyc11g072210.1 Solanum lycopersicum HOM05D000174 ORTHO05D000630 1.4e-06 57.4 244 23.8
Thecc.02G044700 Theobroma cacao HOM05D000174 ORTHO05D001526 1.4e-06 57.4 160 24.4
ECA240G0792 Erigeron canadensis HOM05D000174 ORTHO05D000630 1.9e-06 57.0 250 24.8
TWI79G0030 Tripterygium wilfordii HOM05D000174 ORTHO05D001526 1.9e-06 57.0 158 28.5
GSVIVG01018161001 Vitis vinifera HOM05D001867 ORTHO05D001708 1.9e-06 57.0 170 28.8
GSVIVG01037364001 Vitis vinifera HOM05D000174 ORTHO05D001526 1.9e-06 57.0 164 25.6
ECA236G4312 Erigeron canadensis HOM05D001867 ORTHO05D001708 2.4e-06 56.6 178 25.3
Migut.N02396 Erythranthe guttata HOM05D000174 ORTHO05D000630 2.4e-06 56.6 37 64.9
Gohir.A03G209700 Gossypium hirsutum HOM05D000174 ORTHO05D001526 2.4e-06 56.6 160 26.2
AT2G17180 Arabidopsis thaliana HOM05D000174 ORTHO05D001526 3.2e-06 56.2 150 28.0
CARHR243600 Cardamine hirsuta HOM05D000174 ORTHO05D001526 3.2e-06 56.2 174 27.6
MELO3C013258.2 Cucumis melo HOM05D000174 ORTHO05D001526 3.2e-06 56.2 150 29.3
DCAR_006286 Daucus carota HOM05D000174 ORTHO05D001526 3.2e-06 56.2 157 27.4
QL07p014639 Quercus lobata HOM05D008543 ORTHO05D000630 3.2e-06 56.2 239 24.7
EL10Ac9g21244 Beta vulgaris HOM05D000174 ORTHO05D001526 4.2e-06 55.8 161 33.5
CSS0027823 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D001526 4.2e-06 55.8 162 28.4
COL.COLO4_17932 Corchorus olitorius HOM05D000174 ORTHO05D001526 4.2e-06 55.8 161 26.7
MELO3C014060.2 Cucumis melo HOM05D014059 ORTHO05D019015 4.2e-06 55.8 185 34.1
CANSAT56G2339 Cannabis sativa HOM05D000174 ORTHO05D001526 5.4e-06 55.5 150 28.0
DCAR_017611 Daucus carota HOM05D000174 ORTHO05D000630 5.4e-06 55.5 40 57.5
FvH4_2g16630 Fragaria vesca HOM05D000174 ORTHO05D001526 5.4e-06 55.5 161 27.3
Gohir.D02G231400 Gossypium hirsutum HOM05D000174 ORTHO05D001526 5.4e-06 55.5 160 26.2
Gorai.005G259000 Gossypium raimondii HOM05D000174 ORTHO05D001526 5.4e-06 55.5 160 26.2
Lj5P172T80 Lonicera japonica HOM05D000174 ORTHO05D001526 5.4e-06 55.5 198 27.8
BcaB03g16465 Brassica carinata HOM05D000174 ORTHO05D001526 7.1e-06 55.1 150 26.0
Duzib052G0399 Durio zibethinus HOM05D000174 ORTHO05D001526 7.1e-06 55.1 165 27.3
Duzib132G0848 Durio zibethinus HOM05D000174 ORTHO05D001526 7.1e-06 55.1 165 26.7
FAN15G2497 Fragaria x ananassa HOM05D000174 ORTHO05D001526 7.1e-06 55.1 168 28.6
Hma1.2p1_0032F.1_g018820 Hydrangea macrophylla HOM05D000174 ORTHO05D001526 7.1e-06 55.1 172 27.9
PGR119G0147 Punica granatum HOM05D000174 ORTHO05D000630 7.1e-06 55.1 224 25.4
Sed0016743 Sechium edule HOM05D000174 ORTHO05D001526 7.1e-06 55.1 203 23.2
BcaB05g22249 Brassica carinata HOM05D000174 ORTHO05D000630 9.3e-06 54.7 209 24.9
Carub.0008s1652 Capsella rubella HOM05D000174 ORTHO05D000630 9.3e-06 54.7 242 22.3
CDE02G3608 Ceratophyllum demersum HOM05D000174 ORTHO05D001526 9.3e-06 54.7 160 28.1
Thhalv10023020m.g Eutrema salsugineum HOM05D000174 ORTHO05D001526 9.3e-06 54.7 167 26.3
FvH4_3g41600 Fragaria vesca HOM05D000174 ORTHO05D000630 9.3e-06 54.7 285 25.6
FAN11G0349 Fragaria x ananassa HOM05D000174 ORTHO05D000630 9.3e-06 54.7 285 25.6
FAN24G2331 Fragaria x ananassa HOM05D000174 ORTHO05D001526 9.3e-06 54.7 161 27.3
PGR042G3277 Punica granatum HOM05D000174 ORTHO05D001526 9.3e-06 54.7 150 26.0


User provided reference genes

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