Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 1.0e-85 320.1 171 100.0
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 4.9e-67 258.1 180 78.9
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 5.4e-66 254.6 181 79.0
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 3.7e-59 231.9 177 75.7
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 3.1e-29 132.5 174 52.3
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 1.5e-28 130.2 167 52.1
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 2.0e-28 129.8 187 47.6
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 7.6e-28 127.9 122 63.1
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 9.9e-28 127.5 147 56.5
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 9.9e-28 127.5 164 51.2
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 2.2e-27 126.3 119 63.9
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 3.8e-27 125.6 173 49.7
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 4.9e-27 125.2 184 47.8
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 6.4e-27 124.8 123 62.6
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 1.4e-26 123.6 164 49.4
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 1.4e-26 123.6 182 50.5
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.4e-26 123.6 147 52.4
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 1.9e-26 123.2 122 61.5
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 2.4e-26 122.9 107 62.6
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 2.4e-26 122.9 182 49.5
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 4.2e-26 122.1 143 52.4
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 5.4e-26 121.7 123 56.9
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 5.4e-26 121.7 177 48.0
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 5.4e-26 121.7 131 55.7
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 7.1e-26 121.3 107 65.4
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 9.3e-26 120.9 117 62.4
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 9.3e-26 120.9 123 56.9
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 9.3e-26 120.9 178 48.3
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 1.2e-25 120.6 178 50.6
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 1.2e-25 120.6 181 47.0
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.2e-25 120.6 172 48.3
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.6e-25 120.2 135 54.8
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 2.1e-25 119.8 179 49.2
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 2.1e-25 119.8 113 59.3
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 2.1e-25 119.8 113 59.3
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 2.1e-25 119.8 113 59.3
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 2.1e-25 119.8 140 50.0
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 2.7e-25 119.4 188 45.7
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 3.5e-25 119.0 109 63.3
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 3.5e-25 119.0 109 63.3
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 3.5e-25 119.0 130 59.2
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 4.6e-25 118.6 141 52.5
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 4.6e-25 118.6 171 45.6
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 6.0e-25 118.2 142 50.0
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 6.0e-25 118.2 144 52.8
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 1.8e-24 116.7 113 61.9
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 1.8e-24 116.7 113 61.9
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 1.8e-24 116.7 113 61.9
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 1.8e-24 116.7 89 70.8
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 2.3e-24 116.3 143 51.0
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 2.3e-24 116.3 141 50.4
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 3.0e-24 115.9 177 46.3
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.0e-24 115.9 128 53.9
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 3.9e-24 115.5 100 68.0
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 3.9e-24 115.5 94 68.1
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 5.1e-24 115.2 89 69.7
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 5.1e-24 115.2 174 50.0
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 5.1e-24 115.2 173 50.3
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 5.1e-24 115.2 135 51.9
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 6.7e-24 114.8 179 46.4
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 6.7e-24 114.8 87 69.0
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 8.7e-24 114.4 87 69.0
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 8.7e-24 114.4 175 45.7
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.9e-23 113.2 111 59.5
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 1.9e-23 113.2 164 44.5
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 4.3e-23 112.1 138 53.6
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 5.6e-23 111.7 121 55.4
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 7.4e-23 111.3 73 82.2
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 9.6e-23 110.9 183 44.8
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 1.3e-22 110.5 172 43.6
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 1.6e-22 110.2 182 44.0
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 2.1e-22 109.8 110 58.2
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 2.1e-22 109.8 110 58.2
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 4.8e-22 108.6 176 45.5
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 6.2e-22 108.2 126 55.6
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 1.1e-21 107.5 135 50.4
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 2.4e-21 106.3 165 45.5
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 4.0e-21 105.5 93 62.4
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 5.3e-21 105.1 67 80.6
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 9.0e-21 104.4 117 53.0
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 9.0e-21 104.4 184 44.6
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 1.2e-20 104.0 124 54.8
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 1.2e-20 104.0 164 42.7
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 2.0e-20 103.2 120 55.8
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 2.0e-20 103.2 111 54.1
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 5.8e-20 101.7 83 63.9
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 5.8e-20 101.7 174 46.0
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 7.6e-20 101.3 169 43.2
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 7.6e-20 101.3 127 49.6
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 1.3e-19 100.5 66 77.3
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 1.7e-19 100.1 67 71.6
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 1.1e-18 97.4 65 78.5
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 1.1e-18 97.4 160 45.6
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 1.1e-18 97.4 115 50.4
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 2.1e-17 93.2 117 50.4
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 6.0e-17 91.7 69 68.1
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.3e-16 90.5 59 74.6
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 7.4e-15 84.7 87 51.7
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 9.6e-15 84.3 65 66.2
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 1.2e-12 77.4 107 45.8
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.9e-10 70.1 78 52.6
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 1.2e-09 67.4 112 42.0
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 9.7e-07 57.8 50 56.0
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 1.3e-06 57.4 158 36.1
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 3.7e-06 55.8 129 39.5


User provided reference genes

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