Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ScUNg0000260 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.7e-77 292.7 165 100.0
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.3e-45 186.8 108 100.0
Sc04g0003130 Simmondsia chinensis HOM05D001070 ORTHO05D002096 4.4e-33 145.2 83 91.6
ScUNg0001540 Simmondsia chinensis HOM05D001070 ORTHO05D002096 3.3e-28 129.0 87 93.1
Sed0027483 Sechium edule HOM05D001070 ORTHO05D010233 2.0e-25 119.8 153 54.2
Nitab4.5_0023521g0010 Nicotiana tabacum HOM05D000388 ORTHO05D000473 1.4e-18 97.1 126 53.2
Solyc00g500190.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.0e-18 95.5 107 59.8
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 9.0e-18 94.4 118 56.8
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 9.0e-18 94.4 118 56.8
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 9.0e-18 94.4 118 56.8
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 9.0e-18 94.4 118 56.8
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 9.0e-18 94.4 118 56.8
Nitab4.5_0002628g0020 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.2e-17 94.0 126 51.6
Peaxi162Scf00130g00416 Petunia axillaris HOM05D001070 ORTHO05D002096 1.2e-17 94.0 97 62.9
Peaxi162Scf00338g00618 Petunia axillaris HOM05D001070 ORTHO05D002096 1.2e-17 94.0 97 62.9
Peaxi162Scf00536g00047 Petunia axillaris HOM05D001070 ORTHO05D002096 1.2e-17 94.0 97 62.9
Solyc00g500040.1 Solanum lycopersicum HOM05D001070 ORTHO05D013014 2.6e-17 92.8 157 47.8
Solyc00g500084.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.6e-17 92.8 157 47.8
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.6e-17 92.8 157 47.8
PGSC0003DMG400004187 Solanum tuberosum HOM05D001070 ORTHO05D002096 5.8e-17 91.7 156 48.1
DCAR_019125 Daucus carota HOM05D001070 ORTHO05D002096 1.3e-16 90.5 101 60.4
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 1.3e-16 90.5 101 60.4
Ciclev10010879m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.9e-16 89.4 118 56.8
Ciclev10013978m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.9e-16 89.4 118 56.8
Ciclev10013980m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.9e-16 89.4 118 56.8
Ciclev10013987m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.9e-16 89.4 118 56.8
Ciclev10013999m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.9e-16 89.4 118 56.8
Ciclev10014002m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.9e-16 89.4 118 56.8
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.9e-16 89.4 118 56.8
Ciclev10030452m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.9e-16 89.4 118 56.8
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 3.8e-16 89.0 97 59.8
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 3.8e-16 89.0 65 75.4
QL93p0141_0004 Quercus lobata HOM05D001070 ORTHO05D010233 1.4e-15 87.0 65 70.8
Nitab4.5_0012234g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.9e-15 86.7 126 50.0
SalBow1G3373 Salvia bowleyana HOM05D001070 ORTHO05D002096 1.9e-15 86.7 114 51.8
SalBow1G6555 Salvia bowleyana HOM05D001070 ORTHO05D002096 1.9e-15 86.7 114 51.8
Oeu010690.1 Olea europaea HOM05D001070 ORTHO05D002096 5.5e-15 85.1 117 49.6
Solyc12g036550.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.5e-15 85.1 88 64.8
ClCG11G009260 Citrullus lanatus HOM05D001070 ORTHO05D010233 1.6e-14 83.6 65 66.2
Oeu022558.1 Olea europaea HOM05D001070 ORTHO05D002096 2.1e-14 83.2 116 52.6
Sed0002593 Sechium edule HOM05D001070 ORTHO05D002096 3.5e-14 82.4 117 58.1
Sed0025207 Sechium edule HOM05D001070 ORTHO05D002096 3.5e-14 82.4 117 58.1
ClCG11G009270 Citrullus lanatus HOM05D001070 ORTHO05D002096 7.9e-14 81.3 97 62.9
TAR624G0722 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.0e-13 80.9 114 57.0
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.0e-13 80.9 114 57.0
FAN13G2309 Fragaria x ananassa HOM05D001070 ORTHO05D002096 1.3e-13 80.5 82 62.2
TAR626G0349 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.3e-13 80.5 114 57.0
Potri.002G008176 Populus trichocarpa HOM05D001070 ORTHO05D002096 1.8e-13 80.1 70 72.9
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 5.1e-13 78.6 110 53.6
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 5.1e-13 78.6 110 53.6
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 6.7e-13 78.2 59 71.2
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 1.9e-12 76.6 60 68.3
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 4.3e-12 75.5 59 67.8
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 5.6e-12 75.1 52 75.0
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 5.6e-12 75.1 59 66.1
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 7.4e-12 74.7 64 70.3
C02p28780 Brassica napus HOM05D001070 ORTHO05D010233 1.3e-11 73.9 74 59.5
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 1.3e-11 73.9 74 59.5
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 1.3e-11 73.9 74 59.5
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 1.3e-11 73.9 114 57.0
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.6e-11 73.6 64 65.6
Gohir.A03G072900 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.1e-11 73.2 127 48.0
CAN.G965.9 Capsicum annuum HOM05D001070 ORTHO05D002096 3.7e-11 72.4 106 57.5
Potri.011G073900 Populus trichocarpa HOM05D001070 ORTHO05D002096 3.7e-11 72.4 101 50.5
Solyc11g044680.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 8.1e-11 71.2 118 48.3
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 3.1e-10 69.3 59 62.7
Nitab4.5_0004841g0060 Nicotiana tabacum HOM05D001070 ORTHO05D002096 5.3e-10 68.6 102 52.0
Aqoxy4G02031 Aquilegia oxysepala HOM05D001070 ORTHO05D002096 6.9e-10 68.2 117 48.7
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 9.0e-10 67.8 64 62.5
CAN.G100.34 Capsicum annuum HOM05D001200 ORTHO05D002731 5.8e-09 65.1 104 56.7
Sed0021842 Sechium edule HOM05D001070 ORTHO05D002096 5.8e-09 65.1 117 49.6
Ciclev10014005m.g Citrus clementina HOM05D001070 ORTHO05D002096 7.6e-09 64.7 77 61.0
Ciclev10027654m.g Citrus clementina HOM05D001070 ORTHO05D002096 7.6e-09 64.7 77 61.0
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 1.3e-08 63.9 64 59.4
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 1.3e-08 63.9 65 53.8
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 1.3e-08 63.9 65 53.8
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 1.3e-08 63.9 65 53.8
Gorai.012G102000 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.7e-08 63.5 44 75.0
PSO357G0427 Papaver somniferum HOM05D001070 ORTHO05D010233 2.9e-08 62.8 65 53.8
Solyc02g011860.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.9e-08 62.8 120 45.8
EL10Ac4g08269 Beta vulgaris HOM05D001070 ORTHO05D002096 8.4e-08 61.2 108 48.1
Oeu023335.1 Olea europaea HOM05D001070 ORTHO05D002096 8.4e-08 61.2 85 49.4
Sabra06G0005100 Salix brachista HOM05D001711 ORTHO05D002847 8.4e-08 61.2 56 71.4
Atru.chr8.922 Acer truncatum HOM05D001070 ORTHO05D002096 2.5e-07 59.7 82 59.8
Sed0020782 Sechium edule HOM05D001070 ORTHO05D002096 2.5e-07 59.7 54 68.5
Solyc11g021310.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.2e-07 58.9 118 44.1
Sed0000142 Sechium edule HOM05D001070 ORTHO05D002096 5.5e-07 58.5 117 47.9
Sed0025623 Sechium edule HOM05D001070 ORTHO05D002096 5.5e-07 58.5 117 47.9
EL10As15g24135 Beta vulgaris HOM05D001070 ORTHO05D002096 7.1e-07 58.2 111 46.8
Gorai.006G095000 Gossypium raimondii HOM05D001070 ORTHO05D010233 9.3e-07 57.8 64 53.1
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.7e-06 56.2 64 56.2
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 2.7e-06 56.2 64 56.2
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 3.5e-06 55.8 120 45.8
PSO541G2875 Papaver somniferum HOM05D001070 ORTHO05D002096 3.5e-06 55.8 139 43.9
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.6e-06 55.5 72 45.8
Solyc10g062235.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.6e-06 55.5 57 59.6
Migut.G00823 Erythranthe guttata HOM05D001070 ORTHO05D010233 6.0e-06 55.1 55 63.6
Solyc04g045540.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 6.0e-06 55.1 57 61.4


User provided reference genes

Program Settings