Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 9.2e-116 420.2 213 100.0
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 1.4e-76 290.0 188 77.7
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 2.3e-74 282.7 176 80.1
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 7.4e-73 277.7 203 74.4
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 9.7e-73 277.3 202 70.8
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 9.7e-73 277.3 178 77.0
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 3.7e-72 275.4 179 77.7
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 1.1e-71 273.9 182 76.4
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 1.1e-71 273.9 185 76.2
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 1.8e-71 273.1 182 74.7
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 1.8e-71 273.1 175 77.1
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 3.1e-71 272.3 179 76.5
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 6.9e-71 271.2 180 77.8
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 9.0e-71 270.8 182 73.6
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 9.0e-71 270.8 180 77.2
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.2e-70 270.4 180 77.2
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 1.2e-70 270.4 187 72.2
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.0e-69 267.3 185 71.9
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 1.3e-69 266.9 180 73.3
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 2.9e-69 265.8 181 72.9
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.8e-69 265.4 186 72.0
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 3.8e-69 265.4 187 71.7
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 5.0e-69 265.0 187 69.5
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 6.5e-69 264.6 186 72.0
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 2.5e-68 262.7 186 72.6
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 3.2e-68 262.3 180 75.0
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 4.2e-68 261.9 185 70.8
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.2e-67 260.4 171 76.6
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 4.6e-67 258.5 187 70.6
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 4.6e-67 258.5 172 73.8
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 6.1e-67 258.1 180 73.9
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 6.1e-67 258.1 179 70.9
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 7.9e-67 257.7 195 66.7
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 7.9e-67 257.7 179 74.9
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 7.9e-67 257.7 179 71.5
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.0e-66 257.3 179 73.7
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.0e-66 257.3 179 71.5
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.4e-66 256.9 172 73.3
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 1.4e-66 256.9 179 73.2
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 1.8e-66 256.5 192 72.9
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 3.0e-66 255.8 177 72.9
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 3.0e-66 255.8 186 69.4
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 3.9e-66 255.4 175 76.0
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 5.1e-66 255.0 186 71.0
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 6.7e-66 254.6 180 72.8
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 8.8e-66 254.2 179 72.6
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 1.1e-65 253.8 189 71.4
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 2.0e-65 253.1 180 71.7
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 2.5e-65 252.7 182 67.6
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 7.4e-65 251.1 179 70.4
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 9.7e-65 250.8 183 68.9
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 9.7e-65 250.8 190 72.6
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 1.3e-64 250.4 182 70.3
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 1.7e-64 250.0 177 69.5
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 6.3e-64 248.1 179 71.5
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.1e-63 247.3 187 70.1
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 2.4e-63 246.1 159 76.7
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 6.9e-63 244.6 187 71.7
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 1.5e-62 243.4 169 72.8
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.4e-62 242.3 197 62.4
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 2.2e-61 239.6 182 67.0
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 2.2e-61 239.6 239 54.8
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 3.8e-61 238.8 186 65.6
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 3.8e-61 238.8 184 67.4
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 1.4e-60 236.9 191 63.4
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 2.5e-60 236.1 195 62.6
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 5.5e-60 235.0 186 65.6
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 5.5e-60 235.0 201 66.7
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 5.5e-60 235.0 201 66.7
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 1.6e-59 233.4 186 64.5
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 1.6e-59 233.4 186 65.1
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 3.6e-59 232.3 179 69.3
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 4.7e-59 231.9 164 68.9
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 1.0e-58 230.7 173 65.3
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 1.4e-58 230.3 187 65.2
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 1.8e-58 229.9 186 65.1
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 1.3e-56 223.8 197 60.4
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 1.7e-56 223.4 182 61.5
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 1.7e-56 223.4 186 61.8
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 2.2e-56 223.0 171 63.7
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 2.2e-56 223.0 171 63.2
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 2.8e-56 222.6 171 63.2
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 5.3e-55 218.4 142 76.1
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 1.6e-54 216.9 139 76.3
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 2.6e-54 216.1 176 60.2
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 1.3e-53 213.8 139 75.5
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.7e-53 213.4 120 86.7
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 2.2e-53 213.0 171 63.2
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 3.8e-53 212.2 155 72.3
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 5.0e-53 211.8 186 58.6
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 5.0e-53 211.8 132 80.3
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 2.7e-51 206.1 134 76.1
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 3.7e-48 195.7 198 57.1
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 1.0e-42 177.6 186 52.7
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.8e-42 176.8 120 70.8
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 6.8e-42 174.9 165 59.4
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 7.5e-41 171.4 176 56.2
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 7.0e-39 164.9 166 50.0
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 4.2e-36 155.6 194 47.4
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 3.1e-31 139.4 102 74.5
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 7.7e-30 134.8 80 77.5
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 1.0e-29 134.4 128 56.2
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 1.5e-28 130.6 167 47.9
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.5e-25 120.6 177 45.2
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.8e-23 113.6 84 67.9
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 2.3e-21 106.7 173 35.8
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 6.6e-21 105.1 110 53.6
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 7.3e-20 101.7 75 68.0
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 5.2e-18 95.5 138 39.9
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 5.4e-15 85.5 61 62.3
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.8e-10 70.5 89 47.2
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 3.4e-09 66.2 40 80.0
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 2.4e-07 60.1 38 68.4


User provided reference genes

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