Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 1.2e-112 410.2 258 100.0
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 7.1e-86 321.2 249 64.3
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 2.7e-85 319.3 249 63.9
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 2.7e-85 319.3 250 84.0
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 6.0e-85 318.2 249 64.7
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 7.8e-85 317.8 249 82.7
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 7.8e-85 317.8 250 64.0
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 1.3e-84 317.0 252 61.1
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 1.7e-84 316.6 251 67.3
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 3.0e-84 315.8 252 80.6
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 3.9e-84 315.5 251 80.9
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 5.1e-84 315.1 249 83.5
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 5.1e-84 315.1 250 63.2
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 5.1e-84 315.1 248 62.5
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 5.1e-84 315.1 250 82.8
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 6.6e-84 314.7 251 78.9
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 1.1e-83 313.9 255 79.6
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 1.1e-83 313.9 251 77.7
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.5e-83 313.5 249 81.9
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.5e-83 313.5 251 62.2
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 1.5e-83 313.5 249 82.3
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 1.5e-83 313.5 255 78.4
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 1.9e-83 313.2 252 67.5
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 2.5e-83 312.8 255 76.5
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 2.5e-83 312.8 251 64.9
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 5.6e-83 311.6 249 81.9
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 5.6e-83 311.6 249 81.9
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 9.6e-83 310.8 250 63.2
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 9.6e-83 310.8 250 61.6
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.2e-82 310.5 244 63.1
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 1.2e-82 310.5 250 82.4
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.2e-82 310.5 251 62.2
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 1.2e-82 310.5 249 62.2
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 1.6e-82 310.1 250 77.2
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 1.6e-82 310.1 251 82.1
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.6e-82 310.1 252 79.8
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.1e-82 309.7 252 79.8
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 2.8e-82 309.3 250 62.8
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 2.8e-82 309.3 255 78.4
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 2.8e-82 309.3 249 79.5
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 3.6e-82 308.9 251 80.9
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 3.6e-82 308.9 251 80.9
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 3.6e-82 308.9 251 81.7
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 3.6e-82 308.9 249 71.1
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 6.2e-82 308.1 251 80.9
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 8.1e-82 307.8 251 80.5
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 1.1e-81 307.4 250 60.8
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 1.4e-81 307.0 251 78.9
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 1.4e-81 307.0 251 80.1
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 1.4e-81 307.0 248 80.6
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 1.4e-81 307.0 251 78.5
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 2.4e-81 306.2 255 79.2
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 2.4e-81 306.2 249 60.6
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 3.1e-81 305.8 249 61.0
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 5.2e-81 305.1 249 78.7
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 5.2e-81 305.1 251 78.9
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 6.8e-81 304.7 249 81.1
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 6.8e-81 304.7 249 79.9
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 8.9e-81 304.3 256 77.0
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.2e-80 303.9 251 79.7
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 1.5e-80 303.5 256 59.0
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 2.0e-80 303.1 293 68.6
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 2.0e-80 303.1 251 76.9
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 2.6e-80 302.8 256 68.8
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 4.4e-80 302.0 250 60.8
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 4.4e-80 302.0 249 78.7
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 9.9e-80 300.8 255 78.4
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 9.9e-80 300.8 253 62.8
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 1.3e-79 300.4 252 76.2
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 2.9e-79 299.3 251 78.1
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 2.9e-79 299.3 251 59.8
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 3.8e-79 298.9 249 78.3
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 7.1e-78 294.7 251 59.0
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 1.2e-77 293.9 250 77.2
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 1.6e-77 293.5 259 74.1
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 2.1e-77 293.1 253 64.0
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 4.6e-77 292.0 250 57.2
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 4.6e-77 292.0 249 77.1
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.0e-76 290.8 253 76.3
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 3.0e-76 289.3 250 57.2
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 1.1e-75 287.3 253 55.7
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 2.5e-75 286.2 253 55.3
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.5e-75 286.2 253 55.7
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 3.3e-75 285.8 253 55.7
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 2.1e-74 283.1 249 74.3
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 2.1e-74 283.1 257 54.9
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 1.1e-73 280.8 249 75.1
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 2.4e-73 279.6 255 72.9
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.1e-73 279.3 249 66.7
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 4.0e-73 278.9 248 76.2
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 5.3e-73 278.5 249 75.1
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 5.3e-73 278.5 249 75.5
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 6.9e-73 278.1 161 79.5
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 6.9e-73 278.1 249 74.7
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 6.9e-73 278.1 162 79.0
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 9.0e-73 277.7 249 75.1
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 5.8e-72 275.0 251 55.8
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 7.6e-72 274.6 162 77.8
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 3.8e-71 272.3 162 80.2
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 3.2e-70 269.2 253 53.8
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.3e-68 263.1 247 73.3
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 1.5e-67 260.4 164 73.2
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 1.5e-67 260.4 251 69.3
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 2.1e-66 256.5 255 69.8
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 1.1e-62 244.2 254 68.9
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 1.4e-62 243.8 251 49.8
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 9.3e-62 241.1 226 52.7
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.3e-58 230.7 259 49.4
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.4e-54 217.2 138 72.5
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 4.1e-49 199.1 122 71.3
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 5.0e-47 192.2 126 69.8
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 1.5e-43 180.6 310 33.9
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 9.0e-41 171.4 94 80.9
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 9.0e-41 171.4 262 46.2
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 5.9e-32 142.1 106 60.4
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 8.5e-23 111.7 124 52.4
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 2.2e-18 97.1 87 62.1
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 8.3e-10 68.6 75 44.0
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.2e-06 56.6 40 60.0
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 9.4e-06 55.1 63 49.2


User provided reference genes

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