Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0003700 Simmondsia chinensis HOM05D003425 ORTHO05D003897 2.3e-96 355.5 172 100.0
Sc26g0003780 Simmondsia chinensis HOM05D003425 ORTHO05D003897 6.1e-94 347.4 172 97.7
Sc26g0003500 Simmondsia chinensis HOM05D003425 ORTHO05D003897 7.9e-49 197.6 165 60.6
Hund17177 Selenicereus undatus HOM05D003425 ORTHO05D003897 8.4e-43 177.6 166 52.4
GSVIVG01009755001 Vitis vinifera HOM05D003425 ORTHO05D003897 8.7e-40 167.5 164 51.2
QL02p009392 Quercus lobata HOM05D003425 ORTHO05D003897 4.3e-39 165.2 168 50.0
Ciclev10001170m.g Citrus clementina HOM05D003425 ORTHO05D003897 5.6e-39 164.9 166 50.6
Cfa013863 Carpinus fangiana HOM05D003425 ORTHO05D003897 9.6e-39 164.1 170 49.4
Atru.chr13.426 Acer truncatum HOM05D003425 ORTHO05D003897 1.6e-38 163.3 166 49.4
TWI56G1347 Tripterygium wilfordii HOM05D003425 ORTHO05D003897 2.8e-38 162.5 167 48.5
Duzib041G0299 Durio zibethinus HOM05D003425 ORTHO05D003897 3.7e-38 162.2 166 49.4
CiPaw.07G158500 Carya illinoinensis HOM05D003425 ORTHO05D003897 6.2e-38 161.4 166 50.6
Duzib093G1530 Durio zibethinus HOM05D003425 ORTHO05D003897 6.2e-38 161.4 167 49.1
Thecc.08G031800 Theobroma cacao HOM05D003425 ORTHO05D003897 1.1e-37 160.6 166 48.2
Gohir.D05G195200 Gossypium hirsutum HOM05D003425 ORTHO05D003897 2.4e-37 159.5 166 47.6
Gorai.009G200000 Gossypium raimondii HOM05D003425 ORTHO05D003897 2.4e-37 159.5 166 47.6
AUR62014493 Chenopodium quinoa HOM05D003425 ORTHO05D003897 3.1e-37 159.1 166 47.0
Manes.05G156100 Manihot esculenta HOM05D003425 ORTHO05D003897 9.0e-37 157.5 166 49.4
Gohir.A05G191900 Gossypium hirsutum HOM05D003425 ORTHO05D003897 1.2e-36 157.1 166 47.0
Cpa.g.sc104.107 Carica papaya HOM05D003425 ORTHO05D003897 1.5e-36 156.8 163 47.2
Gohir.A06G008100 Gossypium hirsutum HOM05D003425 ORTHO05D003897 2.0e-36 156.4 166 47.6
TAR625G0421 Trochodendron aralioides HOM05D003425 ORTHO05D003897 2.6e-36 156.0 163 47.9
Nn5g29685 Nelumbo nucifera HOM05D003425 ORTHO05D003897 3.4e-36 155.6 166 48.2
Aa31LG7G6080 Aethionema arabicum HOM05D003425 ORTHO05D003897 4.5e-36 155.2 178 47.2
CSS0009417 Camellia sinensis var. sinensis HOM05D003425 ORTHO05D003897 4.5e-36 155.2 166 49.4
Gohir.D06G003800 Gossypium hirsutum HOM05D003425 ORTHO05D003897 4.5e-36 155.2 166 47.0
PGR031G1797 Punica granatum HOM05D003425 ORTHO05D003897 4.5e-36 155.2 166 48.8
Dinv36112 Davidia involucrata HOM05D003425 ORTHO05D003897 7.6e-36 154.5 166 50.0
Gorai.010G008400 Gossypium raimondii HOM05D003425 ORTHO05D003897 7.6e-36 154.5 166 47.0
Aqoxy6G01168 Aquilegia oxysepala HOM05D003425 ORTHO05D003897 1.3e-35 153.7 166 47.6
Cpa.g.sc99.35 Carica papaya HOM05D003425 ORTHO05D003897 1.3e-35 153.7 166 47.0
Rhsim06G0029700 Rhododendron simsii HOM05D003425 ORTHO05D003897 1.3e-35 153.7 166 47.0
DCAR_009967 Daucus carota HOM05D003425 ORTHO05D003897 1.7e-35 153.3 165 49.7
Manes.18G020000 Manihot esculenta HOM05D003425 ORTHO05D003897 1.7e-35 153.3 160 50.0
MD15G1023500 Malus domestica HOM05D003425 ORTHO05D003897 3.8e-35 152.1 161 48.4
EL10Ac1g00639 Beta vulgaris HOM05D003425 ORTHO05D003897 4.9e-35 151.8 171 46.2
Thhalv10007647m.g Eutrema salsugineum HOM05D003425 ORTHO05D003897 4.9e-35 151.8 178 44.4
AL1G35540 Arabidopsis lyrata HOM05D003425 ORTHO05D003897 6.5e-35 151.4 178 45.5
MD08G1026900 Malus domestica HOM05D003425 ORTHO05D003897 6.5e-35 151.4 161 47.8
Actinidia22523 Actinidia chinensis HOM05D003425 ORTHO05D003897 1.1e-34 150.6 166 48.2
Hma1.2p1_0775F.1_g216480 Hydrangea macrophylla HOM05D003425 ORTHO05D003897 1.1e-34 150.6 166 48.2
BraA08t34791Z Brassica rapa HOM05D003425 ORTHO05D003897 1.4e-34 150.2 178 44.4
BcaC07g39145 Brassica carinata HOM05D003425 ORTHO05D003897 1.9e-34 149.8 178 44.4
A08p28610 Brassica napus HOM05D003425 ORTHO05D003897 1.9e-34 149.8 178 44.4
C08p21380 Brassica napus HOM05D003425 ORTHO05D003897 1.9e-34 149.8 178 44.4
BolC8t49775H Brassica oleracea HOM05D003425 ORTHO05D003897 1.9e-34 149.8 178 44.4
Glyma.04G030000 Glycine max HOM05D003425 ORTHO05D003897 2.5e-34 149.4 166 46.4
Glyma.06G030100 Glycine max HOM05D003425 ORTHO05D003897 2.5e-34 149.4 166 46.4
Sp1g19600 Schrenkiella parvula HOM05D003425 ORTHO05D003897 3.2e-34 149.1 178 43.3
AT1G22100 Arabidopsis thaliana HOM05D003425 ORTHO05D003897 5.5e-34 148.3 178 43.8
COL.COLO4_26258 Corchorus olitorius HOM05D003425 ORTHO05D003897 5.5e-34 148.3 166 45.2
Potri.002G032900 Populus trichocarpa HOM05D003425 ORTHO05D003897 5.5e-34 148.3 166 47.0
Prupe.1G375600 Prunus persica HOM05D003425 ORTHO05D003897 5.5e-34 148.3 166 46.4
Prupe.1G549800 Prunus persica HOM05D003425 ORTHO05D003897 5.5e-34 148.3 166 47.0
MELO3C010962.2 Cucumis melo HOM05D003425 ORTHO05D003897 9.3e-34 147.5 166 47.6
ClCG08G014810 Citrullus lanatus HOM05D003425 ORTHO05D003897 1.2e-33 147.1 166 47.6
Eucgr.F01873 Eucalyptus grandis HOM05D003425 ORTHO05D003897 1.2e-33 147.1 166 45.8
Cc10_g02550 Coffea canephora HOM05D003425 ORTHO05D003897 2.7e-33 146.0 168 44.6
Carub.0001s2165 Capsella rubella HOM05D003425 ORTHO05D003897 4.6e-33 145.2 178 42.7
ECA233G5099 Erigeron canadensis HOM05D003425 ORTHO05D003897 7.9e-33 144.4 163 45.4
FAN20G1443 Fragaria x ananassa HOM05D003425 ORTHO05D003897 7.9e-33 144.4 166 43.4
Lj1g0002363 Lotus japonicus HOM05D003425 ORTHO05D003897 7.9e-33 144.4 166 44.0
CsaV3_2G028930 Cucumis sativus L. HOM05D003425 ORTHO05D003897 1.0e-32 144.1 166 46.4
Peaxi162Scf00028g00119 Petunia axillaris HOM05D003425 ORTHO05D003897 1.3e-32 143.7 166 46.4
Medtr3g112130 Medicago truncatula HOM05D003425 ORTHO05D003897 1.8e-32 143.3 166 45.2
Psat5g016160 Pisum sativum HOM05D003425 ORTHO05D003897 2.3e-32 142.9 166 44.6
Sed0012207 Sechium edule HOM05D003425 ORTHO05D003897 2.3e-32 142.9 166 45.8
RcHm_v2.0_Chr6g0301531 Rosa chinensis HOM05D003425 ORTHO05D003897 3.0e-32 142.5 166 43.4
FvH4_2g39440 Fragaria vesca HOM05D003425 ORTHO05D003897 5.1e-32 141.7 166 43.4
vmacro13340 Vaccinium macrocarpon HOM05D003425 ORTHO05D003897 5.1e-32 141.7 166 45.2
FAN27G0002 Fragaria x ananassa HOM05D003425 ORTHO05D003897 1.5e-31 140.2 166 42.8
VMungo0647G0080 Vigna mungo HOM05D003425 ORTHO05D003897 1.5e-31 140.2 167 45.5
Lsat_1_v5_gn_6_69620 Lactuca sativa HOM05D003425 ORTHO05D003897 1.9e-31 139.8 161 44.7
Phvul.009G060100 Phaseolus vulgaris HOM05D003425 ORTHO05D003897 1.9e-31 139.8 166 43.4
TPR.G12467 Trifolium pratense HOM05D003425 ORTHO05D003897 3.3e-31 139.0 165 46.1
Lj5g0018838 Lotus japonicus HOM05D003425 ORTHO05D003897 4.3e-31 138.7 166 44.6
Lalb_Chr23g0266531 Lupinus albus HOM05D003425 ORTHO05D003897 4.3e-31 138.7 166 42.2
Sopen04g034260 Solanum pennellii HOM05D003425 ORTHO05D003897 4.3e-31 138.7 166 45.2
SGA_v2.0_scaffold201G41381 Striga asiatica HOM05D003425 ORTHO05D003897 4.3e-31 138.7 178 43.8
CAN.G710.1 Capsicum annuum HOM05D003425 ORTHO05D003897 7.4e-31 137.9 166 44.6
MBI10_g00770_MAGBIO Magnolia biondii HOM05D003425 ORTHO05D003897 7.4e-31 137.9 171 42.7
SalBow7G0662 Salvia bowleyana HOM05D003425 ORTHO05D003897 7.4e-31 137.9 166 44.6
Lalb_Chr22g0354631 Lupinus albus HOM05D003425 ORTHO05D003897 1.3e-30 137.1 166 45.2
VMungo1309G3095 Vigna mungo HOM05D003425 ORTHO05D003897 1.3e-30 137.1 166 43.4
arahy.Tifrunner.gnm1.ann1.P3QKDQ Arachis hypogaea HOM05D003425 ORTHO05D003897 1.6e-30 136.7 166 46.4
Solyc04g080670.3 Solanum lycopersicum HOM05D003425 ORTHO05D003897 1.6e-30 136.7 166 44.6
Ca_15494_v3 Cicer arietinum L. HOM05D003425 ORTHO05D003897 2.2e-30 136.3 166 42.8
HanXRQChr05g0151701 Helianthus annuus HOM05D003425 ORTHO05D003897 2.8e-30 136.0 164 43.9
BcaB07g31042 Brassica carinata HOM05D003425 ORTHO05D003897 3.7e-30 135.6 164 43.3
PGSC0003DMG400003698 Solanum tuberosum HOM05D003425 ORTHO05D003897 3.7e-30 135.6 166 44.0
arahy.Tifrunner.gnm1.ann1.X2SRZK Arachis hypogaea HOM05D003425 ORTHO05D003897 4.8e-30 135.2 166 45.8
BcaC04g21968 Brassica carinata HOM05D003425 ORTHO05D003897 4.8e-30 135.2 164 43.3
C09p25370 Brassica napus HOM05D003425 ORTHO05D003897 4.8e-30 135.2 164 43.3
CARHR022450 Cardamine hirsuta HOM05D003425 ORTHO05D003897 6.3e-30 134.8 181 41.4
Aa31LG9G12880 Aethionema arabicum HOM05D003425 ORTHO05D003897 1.1e-29 134.0 166 43.4
BcaB03g11898 Brassica carinata HOM05D003425 ORTHO05D003897 1.4e-29 133.7 164 43.9
BraA09t37609Z Brassica rapa HOM05D003425 ORTHO05D003897 1.4e-29 133.7 161 42.9
Potri.005G230200 Populus trichocarpa HOM05D003425 ORTHO05D003897 1.4e-29 133.7 166 44.6
THA.LOC104814145 Tarenaya hassleriana HOM05D003425 ORTHO05D003897 1.4e-29 133.7 159 44.0
HanXRQChr08g0236251 Helianthus annuus HOM05D003425 ORTHO05D003897 1.8e-29 133.3 163 44.2
Nitab4.5_0005911g0010 Nicotiana tabacum HOM05D003425 ORTHO05D003897 2.4e-29 132.9 167 42.5
Peaxi162Scf00140g00065 Petunia axillaris HOM05D003425 ORTHO05D003897 2.4e-29 132.9 167 44.9
A09p20000 Brassica napus HOM05D003425 ORTHO05D003897 3.1e-29 132.5 161 42.9
BolC9t55437H Brassica oleracea HOM05D003425 ORTHO05D003897 3.1e-29 132.5 164 42.7
Sp2g07500 Schrenkiella parvula HOM05D003425 ORTHO05D003897 3.1e-29 132.5 162 41.4
THA.LOC104813817 Tarenaya hassleriana HOM05D003425 ORTHO05D003897 3.1e-29 132.5 168 42.9
Carub.0002s0599 Capsella rubella HOM05D003425 ORTHO05D003897 4.1e-29 132.1 166 42.2
SalBow2G1759 Salvia bowleyana HOM05D003425 ORTHO05D003897 4.1e-29 132.1 166 44.0
Ca_18048_v3 Cicer arietinum L. HOM05D003425 ORTHO05D003897 5.3e-29 131.7 168 42.9
Thhalv10003206m.g Eutrema salsugineum HOM05D003425 ORTHO05D003897 5.3e-29 131.7 167 41.3
Phvul.001G012200 Phaseolus vulgaris HOM05D003425 ORTHO05D003897 9.0e-29 131.0 166 42.8
CANSAT80G1124 Cannabis sativa HOM05D003425 ORTHO05D003897 1.2e-28 130.6 166 41.0
Migut.C00703 Erythranthe guttata HOM05D003425 ORTHO05D003897 1.5e-28 130.2 170 42.4
Migut.C00755 Erythranthe guttata HOM05D003425 ORTHO05D003897 1.5e-28 130.2 169 42.0
Medtr1g022475 Medicago truncatula HOM05D003425 ORTHO05D003897 1.5e-28 130.2 166 41.6
AT1G58643 Arabidopsis thaliana HOM05D003425 ORTHO05D003897 2.0e-28 129.8 165 41.8
AT1G58936 Arabidopsis thaliana HOM05D003425 ORTHO05D003897 2.0e-28 129.8 165 41.8
AT1G59312 Arabidopsis thaliana HOM05D003425 ORTHO05D003897 2.0e-28 129.8 165 41.8
Lsat_1_v5_gn_5_3401 Lactuca sativa HOM05D003425 ORTHO05D003897 2.0e-28 129.8 158 43.0
Lj4A789T47 Lonicera japonica HOM05D003425 ORTHO05D003897 2.6e-28 129.4 168 42.3
AL2G17640 Arabidopsis lyrata HOM05D003425 ORTHO05D003897 3.4e-28 129.0 165 41.8
AT5G42810 Arabidopsis thaliana HOM05D003425 ORTHO05D003897 3.4e-28 129.0 167 40.7
Nitab4.5_0003682g0010 Nicotiana tabacum HOM05D003425 ORTHO05D003897 5.9e-28 128.3 167 41.9
AL8G18220 Arabidopsis lyrata HOM05D003425 ORTHO05D003897 1.3e-27 127.1 160 41.9
ECA246G1007 Erigeron canadensis HOM05D003425 ORTHO05D003897 1.3e-27 127.1 161 42.9
CsaV3_3G045400 Cucumis sativus L. HOM05D003425 ORTHO05D003897 1.7e-27 126.7 163 42.9
PSO675G3885 Papaver somniferum HOM05D003425 ORTHO05D003897 1.7e-27 126.7 166 43.4
Oeu063611.1 Olea europaea HOM05D003425 ORTHO05D003897 2.9e-27 125.9 166 40.4
ATR0568G131 Amborella trichopoda HOM05D003425 ORTHO05D003897 3.8e-27 125.6 170 41.2
Carub.0008s0609 Capsella rubella HOM05D003425 ORTHO05D003897 3.8e-27 125.6 160 41.2
ClCG05G018770 Citrullus lanatus HOM05D003425 ORTHO05D003897 3.8e-27 125.6 161 42.9
Sed0018986 Sechium edule HOM05D003425 ORTHO05D003897 5.0e-27 125.2 163 41.1
MELO3C003802.2 Cucumis melo HOM05D003425 ORTHO05D003897 8.5e-27 124.4 163 42.9
TPR.G14394 Trifolium pratense HOM05D003425 ORTHO05D003897 8.5e-27 124.4 166 39.2
Glyma.14G072200 Glycine max HOM05D003425 ORTHO05D003897 1.1e-26 124.0 166 42.8
arahy.Tifrunner.gnm1.ann1.2UC4WV Arachis hypogaea HOM05D003425 ORTHO05D003897 1.9e-26 123.2 171 42.1
Oeu030423.1 Olea europaea HOM05D003425 ORTHO05D003897 5.5e-26 121.7 155 44.5
PSO541G3967 Papaver somniferum HOM05D003425 ORTHO05D003897 5.5e-26 121.7 166 42.8
Psat6g009400 Pisum sativum HOM05D003425 ORTHO05D003897 5.5e-26 121.7 158 41.1
arahy.Tifrunner.gnm1.ann1.2NS234 Arachis hypogaea HOM05D003425 ORTHO05D003897 9.3e-26 120.9 162 43.2
DCAR_017527 Daucus carota HOM05D003425 ORTHO05D003897 1.2e-25 120.6 170 41.2
Haze_22537 Corylus avellana HOM05D003425 ORTHO05D003897 1.3e-24 117.1 138 44.9
Os04g0661200 Oryza sativa ssp. japonica HOM05D003425 ORTHO05D003897 5.1e-24 115.2 177 35.6
CARHR181460 Cardamine hirsuta HOM05D003425 ORTHO05D003897 1.5e-23 113.6 153 39.2
AUR62038045 Chenopodium quinoa HOM05D003425 ORTHO05D003897 1.9e-23 113.2 162 40.1
AUR62044165 Chenopodium quinoa HOM05D003425 ORTHO05D003897 1.9e-23 113.2 162 40.1
Zm00001eb067500 Zea mays HOM05D003425 ORTHO05D003897 3.3e-23 112.5 177 36.2
Zm00001eb432760 Zea mays HOM05D003425 ORTHO05D003897 5.7e-23 111.7 177 35.0
arahy.Tifrunner.gnm1.ann1.PN9ZPA Arachis hypogaea HOM05D008068 ORTHO05D003897 1.3e-22 110.5 158 40.5
Lj2A96T68 Lonicera japonica HOM05D003425 ORTHO05D003897 1.4e-21 107.1 171 36.3
SHI08133 Sapria himalayana HOM05D003425 ORTHO05D003897 3.1e-21 105.9 159 38.4
QL07p047090 Quercus lobata HOM05D003425 ORTHO05D003897 4.1e-21 105.5 104 49.0
SEGI_21240 Sequoiadendron giganteum HOM05D003425 ORTHO05D003897 9.1e-21 104.4 166 34.3
QL02p009285 Quercus lobata HOM05D003425 ORTHO05D003897 1.2e-20 104.0 104 48.1
CDE06G1246 Ceratophyllum demersum HOM05D003425 ORTHO05D003897 2.0e-20 103.2 166 36.1
Cc00_g02970 Coffea canephora HOM05D003425 ORTHO05D003897 2.0e-20 103.2 163 35.6
Rhsim05G0103100 Rhododendron simsii HOM05D003425 ORTHO05D003897 2.0e-20 103.2 134 41.8
SEGI_18330 Sequoiadendron giganteum HOM05D003425 ORTHO05D003897 3.4e-20 102.4 166 34.9
CDE02G1177 Ceratophyllum demersum HOM05D003425 ORTHO05D003897 4.5e-20 102.1 166 36.1
vmacro21674 Vaccinium macrocarpon HOM05D003425 ORTHO05D003897 5.0e-19 98.6 162 38.9
Sed0022647 Sechium edule HOM05D003425 ORTHO05D003897 1.4e-18 97.1 135 40.0
CSS0020037 Camellia sinensis var. sinensis HOM05D003425 ORTHO05D003897 1.6e-17 93.6 96 52.1
Ah.05g176930 Amaranthus hybridus HOM05D003425 ORTHO05D003897 2.1e-17 93.2 104 43.3
Rhsim07G0021300 Rhododendron simsii HOM05D003425 ORTHO05D003897 3.6e-17 92.4 104 45.2
Rhsim07G0021500 Rhododendron simsii HOM05D003425 ORTHO05D003897 3.9e-16 89.0 104 44.2
Pp3c14_17850 Physcomitrium patens HOM05D003425 ORTHO05D003897 8.2e-14 81.3 165 33.3
AagrBONN_evm.TU.Sc2ySwM_362.197 Anthoceros agrestis HOM05D003425 ORTHO05D003897 1.1e-13 80.9 160 32.5
Mapoly0027s0188 Marchantia polymorpha HOM05D003425 ORTHO05D003897 3.1e-13 79.3 160 30.0
Pp3c1_36100 Physcomitrium patens HOM05D003425 ORTHO05D003897 2.0e-12 76.6 157 33.1
SMO200G0117 Selaginella moellendorffii HOM05D003425 ORTHO05D003897 2.2e-11 73.2 169 28.4
C07p21730 Brassica napus HOM05D003425 ORTHO05D003897 1.1e-10 70.9 56 50.0
BolC7t42703H Brassica oleracea HOM05D003425 ORTHO05D003897 1.1e-10 70.9 56 50.0
CBR_g22893 Chara braunii HOM05D000019 ORTHO05D000002 7.2e-10 68.2 182 28.0
Mapoly0027s0125 Marchantia polymorpha HOM05D003425 ORTHO05D003897 9.4e-10 67.8 162 29.0
HPP92_003107 Vanilla planifolia HOM05D003425 ORTHO05D003897 1.2e-09 67.4 48 56.2
HPP92_006412 Vanilla planifolia HOM05D003425 ORTHO05D003897 4.7e-09 65.5 46 56.5
TAR628G0427 Trochodendron aralioides HOM05D003425 ORTHO05D003897 1.0e-08 64.3 93 45.2
PGSC0003DMG400015950 Solanum tuberosum HOM05D003425 ORTHO05D003897 3.9e-08 62.4 64 46.9
SEGI_34796 Sequoiadendron giganteum HOM05D003425 ORTHO05D003897 1.1e-07 60.8 91 37.4
Lsat_1_v5_gn_0_45760 Lactuca sativa HOM05D003425 ORTHO05D003897 9.7e-07 57.8 49 55.1


User provided reference genes

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