Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.4e-27 126.7 118 100.0
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 5.2e-14 81.6 81 74.1
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 8.9e-14 80.9 81 85.2
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 7.5e-13 77.8 82 80.5
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 1.2e-10 70.5 89 69.7
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.0e-10 68.2 79 77.2
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 7.8e-10 67.8 85 64.7
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.0e-09 67.4 85 61.2
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 1.3e-09 67.0 43 69.8
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.7e-09 66.6 85 61.2
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 1.7e-09 66.6 38 76.3
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 2.3e-09 66.2 82 75.6
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 3.0e-09 65.9 86 74.4
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.0e-09 65.9 85 68.2
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 3.0e-09 65.9 85 68.2
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 3.9e-09 65.5 43 69.8
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 3.9e-09 65.5 86 75.6
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 3.9e-09 65.5 39 71.8
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.9e-09 65.5 83 68.7
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 3.9e-09 65.5 86 50.0
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 5.1e-09 65.1 85 71.8
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 6.6e-09 64.7 43 65.1
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 6.6e-09 64.7 89 66.3
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 6.6e-09 64.7 39 74.4
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 8.6e-09 64.3 39 69.2
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 8.6e-09 64.3 39 69.2
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 8.6e-09 64.3 82 75.6
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.1e-08 63.9 39 69.2
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 1.1e-08 63.9 84 67.9
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 1.5e-08 63.5 39 69.2
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.5e-08 63.5 39 69.2
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.5e-08 63.5 84 63.1
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 2.5e-08 62.8 43 67.4
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 2.5e-08 62.8 43 67.4
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 2.5e-08 62.8 39 69.2
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 2.5e-08 62.8 43 60.5
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.5e-08 62.8 39 69.2
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.5e-08 62.8 39 71.8
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.5e-08 62.8 39 69.2
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.5e-08 62.8 39 69.2
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.5e-08 62.8 39 71.8
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 2.5e-08 62.8 39 69.2
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.3e-08 62.4 82 63.4
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 3.3e-08 62.4 43 65.1
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.3e-08 62.4 39 71.8
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.3e-08 62.0 38 76.3
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 4.3e-08 62.0 90 54.4
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.3e-08 62.0 82 68.3
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.3e-08 62.0 82 73.2
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 4.3e-08 62.0 39 69.2
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 5.6e-08 61.6 80 70.0
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 7.3e-08 61.2 39 69.2
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 7.3e-08 61.2 41 65.9
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 7.3e-08 61.2 39 66.7
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 9.5e-08 60.8 39 69.2
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 9.5e-08 60.8 85 70.6
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 9.5e-08 60.8 38 71.1
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-07 60.1 82 68.3
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.6e-07 60.1 41 63.4
AUR62014501 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.1e-07 59.7 80 73.8
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 2.1e-07 59.7 43 62.8
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.8e-07 59.3 80 66.2
AUR62035549 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.6e-07 58.9 81 72.8
AUR62038034 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.6e-07 58.9 81 72.8
AUR62038037 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.6e-07 58.9 81 72.8
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.6e-07 58.9 38 71.1
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.6e-07 58.9 82 69.5
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.6e-07 58.9 82 67.1
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 3.6e-07 58.9 82 67.1
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.7e-07 58.5 39 69.2
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.7e-07 58.5 85 71.8
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.7e-07 58.5 39 64.1
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 4.7e-07 58.5 35 71.4
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.2e-07 58.2 37 67.6
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.2e-07 58.2 82 56.1
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 8.1e-07 57.8 39 66.7
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 8.1e-07 57.8 39 66.7
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 8.1e-07 57.8 39 66.7
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.1e-06 57.4 38 68.4
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 1.1e-06 57.4 37 70.3
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.4e-06 57.0 38 68.4
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.4e-06 57.0 38 68.4
Sc20g0003600 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.8e-06 56.6 90 66.7
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.4e-06 56.2 38 63.2
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 2.4e-06 56.2 38 63.2
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.4e-06 56.2 39 61.5
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 2.4e-06 56.2 85 62.4
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.0e-06 55.5 38 63.2
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 8.9e-06 54.3 35 62.9
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 8.9e-06 54.3 37 62.2
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 8.9e-06 54.3 37 62.2
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 8.9e-06 54.3 43 55.8


User provided reference genes

Program Settings