Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0003190 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.0e-70 266.9 130 100.0
Sc01g0005690 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-27 125.9 121 51.2
Sc19g0006300 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-27 125.9 114 56.1
Sc23g0004070 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.4e-27 124.4 110 55.5
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.3e-27 124.0 113 52.2
Sc13g0005400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.4e-26 122.5 115 53.0
Sc06g0004260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.1e-26 120.9 92 65.2
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.2e-26 120.6 112 54.5
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.6e-25 119.8 82 65.9
Sc07g0006510 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.0e-25 117.9 99 57.6
Sc10g0006460 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-24 116.7 96 59.4
Sc23g0003820 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.1e-24 114.8 99 57.6
Sc09g0006390 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.5e-23 112.5 101 58.4
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.1e-22 109.4 105 52.4
Sc05g0005650 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.1e-22 107.5 86 59.3
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-21 106.7 106 50.0
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.1e-21 105.5 92 53.3
Sc16g0005360 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.0e-21 105.1 100 51.0
Sc26g0002220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-20 103.2 121 47.9
Sc06g0006000 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.4e-20 101.7 88 55.7
Sc19g0006270 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-19 99.8 85 57.6
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-19 99.8 98 53.1
Sc17g0003640 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.8e-19 98.6 105 52.4
Sc20g0002870 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-18 97.1 101 49.5
Sc11g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-18 96.7 76 63.2
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.2e-18 95.1 114 46.5
Sc24g0000790 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.2e-17 93.6 55 78.2
Sc25g0003910 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.2e-17 93.6 66 63.6
Sc08g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.1e-17 92.8 68 61.8
Sc11g0005100 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.5e-17 92.0 101 48.5
Sc01g0002780 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.8e-17 90.9 90 48.9
Sc04g0003750 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.1e-16 88.2 82 51.2
Sc16g0006020 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-15 86.7 69 59.4
Sc23g0004620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.1e-14 82.8 78 52.6
Sc12g0005980 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.9e-11 71.6 62 58.1
Sc04g0003720 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.2e-10 68.6 57 59.6
Sc07g0006130 Simmondsia chinensis HOM05D009209 ORTHO05D009629 1.3e-08 63.5 112 31.2
Sc20g0003570 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-08 63.5 34 79.4
Ah.07g196620 Amaranthus hybridus HOM05D008762 ORTHO05D031041 2.3e-08 62.8 96 32.3
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 5.1e-08 61.6 98 33.7
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 6.6e-08 61.2 98 34.7
Sc22g0002690 Simmondsia chinensis HOM05D000043 ORTHO05D030613 1.5e-07 60.1 83 41.0
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.5e-07 59.3 87 40.2
Ah.15g100500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.3e-07 58.9 93 33.3
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 5.6e-07 58.2 95 29.5
Ah.02g118210 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.3e-07 57.8 76 38.2
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 9.6e-07 57.4 79 36.7
Ah.11g045590 Amaranthus hybridus HOM05D000851 ORTHO05D003960 9.6e-07 57.4 98 28.6
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 9.6e-07 57.4 79 35.4
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-06 56.6 76 34.2
Gorai.008G040300 Gossypium raimondii HOM05D038512 ORTHO05D015081 2.1e-06 56.2 78 41.0
Ah.08g221330 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.8e-06 55.8 78 34.6
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.8e-06 55.8 78 34.6
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.6e-06 55.5 76 39.5
Ah.13g066110 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.6e-06 55.5 129 33.3
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 4.8e-06 55.1 115 27.8
Cc05_g13020 Coffea canephora HOM05D000142 ORTHO05D000124 6.2e-06 54.7 94 34.0
Gohir.D12G038550 Gossypium hirsutum HOM05D038512 ORTHO05D015081 8.1e-06 54.3 78 39.7


User provided reference genes

Program Settings