Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 1.2e-59 233.0 119 100.0
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.5e-43 179.5 115 81.7
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.9e-41 172.6 115 78.3
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 3.9e-39 164.9 111 74.8
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 1.1e-38 163.3 111 73.0
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 3.3e-38 161.8 112 73.2
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 3.3e-38 161.8 112 73.2
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 7.4e-38 160.6 116 74.1
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 1.3e-37 159.8 110 74.5
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 1.3e-37 159.8 114 71.9
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 1.6e-37 159.5 110 76.4
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 2.8e-37 158.7 114 71.9
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 3.7e-37 158.3 113 70.8
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 6.2e-37 157.5 110 75.5
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 6.2e-37 157.5 115 71.3
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 1.1e-36 156.8 113 69.9
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 1.1e-36 156.8 110 75.5
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 1.1e-36 156.8 110 75.5
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 1.4e-36 156.4 111 73.9
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 1.8e-36 156.0 118 68.6
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 3.1e-36 155.2 113 72.6
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 4.0e-36 154.8 119 68.9
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 4.0e-36 154.8 113 69.9
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 5.3e-36 154.5 110 72.7
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 5.3e-36 154.5 115 67.8
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 5.3e-36 154.5 115 67.8
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 5.3e-36 154.5 110 74.5
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 5.3e-36 154.5 110 74.5
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 6.9e-36 154.1 110 72.7
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 6.9e-36 154.1 112 69.6
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 6.9e-36 154.1 119 66.4
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 6.9e-36 154.1 112 71.4
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 9.0e-36 153.7 115 69.6
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 9.0e-36 153.7 111 69.4
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 2.0e-35 152.5 112 70.5
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 2.0e-35 152.5 110 71.8
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 2.6e-35 152.1 110 69.1
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 2.6e-35 152.1 110 69.1
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 2.6e-35 152.1 110 71.8
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 5.8e-35 151.0 113 68.1
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 5.8e-35 151.0 115 71.3
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 1.0e-34 150.2 110 70.0
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 1.0e-34 150.2 112 69.6
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 1.3e-34 149.8 115 67.0
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 1.3e-34 149.8 110 69.1
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 1.7e-34 149.4 106 70.8
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 1.7e-34 149.4 105 72.4
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 2.2e-34 149.1 110 70.9
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 2.9e-34 148.7 110 70.0
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 3.8e-34 148.3 110 68.2
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 3.8e-34 148.3 116 66.4
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 3.8e-34 148.3 115 64.3
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 3.8e-34 148.3 110 68.2
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 6.5e-34 147.5 113 68.1
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 6.5e-34 147.5 113 68.1
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 6.5e-34 147.5 113 68.1
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 6.5e-34 147.5 113 68.1
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 6.5e-34 147.5 113 68.1
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 6.5e-34 147.5 113 68.1
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 6.5e-34 147.5 110 68.2
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 1.1e-33 146.7 110 70.9
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 1.1e-33 146.7 108 71.3
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 1.4e-33 146.4 108 72.2
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 1.4e-33 146.4 112 68.8
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 1.9e-33 146.0 113 68.1
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 1.9e-33 146.0 114 67.5
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 2.5e-33 145.6 117 64.1
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 2.5e-33 145.6 113 70.8
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 3.2e-33 145.2 111 65.8
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 3.2e-33 145.2 110 70.0
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 3.2e-33 145.2 110 68.2
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 1.2e-32 143.3 111 67.6
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 1.2e-32 143.3 110 67.3
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 1.2e-32 143.3 107 67.3
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 2.1e-32 142.5 113 65.5
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 2.7e-32 142.1 110 68.2
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 2.7e-32 142.1 102 72.5
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 1.3e-31 139.8 110 68.2
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 2.3e-31 139.0 106 65.1
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 2.3e-31 139.0 113 63.7
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 3.0e-31 138.7 108 69.4
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 4.3e-30 134.8 111 61.3
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 7.4e-30 134.0 87 81.6
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 1.6e-29 132.9 119 59.7
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 2.1e-29 132.5 134 54.5
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 5.3e-28 127.9 104 64.4
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 9.0e-28 127.1 97 68.0
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.7e-26 122.9 83 75.9
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.4e-25 119.8 82 73.2
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.4e-25 119.8 82 75.6
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 3.2e-25 118.6 100 66.0
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 4.2e-25 118.2 84 72.6
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 7.2e-25 117.5 178 42.7
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 9.3e-25 117.1 82 73.2
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 9.3e-25 117.1 115 59.1
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 1.2e-24 116.7 91 64.8
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 2.1e-24 115.9 88 71.6
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.7e-24 115.5 87 65.5
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 3.5e-24 115.2 83 71.1
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 4.6e-24 114.8 82 72.0
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 4.6e-24 114.8 91 68.1
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 6.1e-24 114.4 84 73.8
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 5.1e-23 111.3 90 68.9
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.5e-22 109.8 85 69.4
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 9.7e-22 107.1 79 65.8
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 6.9e-20 100.9 83 62.7
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 1.7e-18 96.3 79 64.6
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 1.4e-17 93.2 64 76.6
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 2.1e-16 89.4 78 57.7
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 4.6e-16 88.2 114 50.0
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 7.9e-16 87.4 108 45.4
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 3.3e-14 82.0 114 43.9
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 3.3e-14 82.0 70 58.6
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 5.7e-14 81.3 52 75.0
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 9.1e-12 73.9 44 79.5
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.5e-11 73.2 53 69.8
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 7.2e-09 64.3 59 64.4
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 5.7e-06 54.7 108 35.2


User provided reference genes

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