Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 4.8e-78 294.7 176 100.0
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 3.2e-66 255.4 142 98.6
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 4.4e-55 218.4 139 84.2
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 3.5e-36 155.6 142 62.7
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 5.1e-35 151.8 142 62.7
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 6.6e-35 151.4 177 51.4
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 6.6e-35 151.4 142 59.9
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.5e-34 150.2 142 59.9
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 1.5e-34 150.2 142 59.9
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 1.9e-34 149.8 140 62.1
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.5e-34 149.4 142 59.9
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 3.3e-34 149.1 145 57.9
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 4.3e-34 148.7 149 58.4
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 1.2e-33 147.1 140 58.6
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 2.1e-33 146.4 140 58.6
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 2.1e-33 146.4 142 61.3
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 2.1e-33 146.4 142 62.0
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 2.8e-33 146.0 142 57.7
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 2.8e-33 146.0 142 58.5
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 6.2e-33 144.8 140 60.7
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 6.2e-33 144.8 138 60.9
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 8.1e-33 144.4 136 58.8
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 1.1e-32 144.1 142 59.9
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 1.4e-32 143.7 140 60.7
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 1.8e-32 143.3 140 58.6
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 1.8e-32 143.3 137 59.9
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 5.2e-32 141.7 137 59.9
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 8.9e-32 141.0 138 56.5
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 8.9e-32 141.0 136 54.4
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 2.6e-31 139.4 140 55.0
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 2.6e-31 139.4 140 60.0
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 3.4e-31 139.0 140 58.6
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 3.4e-31 139.0 165 52.1
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 5.8e-31 138.3 140 57.1
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 1.3e-30 137.1 144 53.5
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 1.7e-30 136.7 141 55.3
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 2.2e-30 136.3 137 56.9
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 2.9e-30 136.0 149 53.0
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 4.9e-30 135.2 140 57.1
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 1.1e-29 134.0 140 53.6
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 4.1e-29 132.1 139 56.1
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 4.1e-29 132.1 138 55.1
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 4.1e-29 132.1 138 55.8
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 5.4e-29 131.7 140 54.3
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 7.1e-29 131.3 139 56.1
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 7.1e-29 131.3 133 56.4
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 1.2e-28 130.6 139 56.1
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 2.7e-28 129.4 142 54.9
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 4.6e-28 128.6 141 51.8
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 6.0e-28 128.3 140 55.0
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 1.0e-27 127.5 152 50.7
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 1.0e-27 127.5 151 51.0
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 1.3e-27 127.1 136 55.1
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 1.7e-27 126.7 138 52.9
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 3.0e-27 125.9 142 54.2
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 6.6e-27 124.8 139 54.7
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 1.1e-26 124.0 137 52.6
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 1.1e-26 124.0 139 54.7
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 1.1e-26 124.0 142 53.5
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 1.9e-26 123.2 140 52.9
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 1.9e-26 123.2 147 50.3
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.5e-26 122.9 139 51.8
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 4.3e-26 122.1 139 51.8
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 5.6e-26 121.7 142 53.5
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 9.6e-26 120.9 112 62.5
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 9.6e-26 120.9 142 52.1
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 9.6e-26 120.9 125 55.2
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 1.6e-25 120.2 139 52.5
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 4.7e-25 118.6 177 45.8
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 8.1e-25 117.9 137 48.9
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 4.4e-23 112.1 137 52.6
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 9.9e-23 110.9 136 49.3
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 1.7e-22 110.2 135 45.2
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 1.7e-22 110.2 140 48.6
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 4.9e-22 108.6 144 47.9
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 8.4e-22 107.8 137 48.2
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 1.1e-21 107.5 136 47.1
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 1.9e-21 106.7 137 50.4
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.9e-21 106.7 137 47.4
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 2.4e-21 106.3 136 46.3
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 4.2e-21 105.5 143 45.5
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 7.1e-21 104.8 137 46.0
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 9.3e-21 104.4 139 48.2
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 1.2e-20 104.0 137 46.0
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 1.2e-20 104.0 139 46.8
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 1.6e-20 103.6 137 45.3
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 1.6e-20 103.6 133 45.1
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 2.1e-20 103.2 139 47.5
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 2.1e-20 103.2 122 47.5
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 2.1e-20 103.2 144 45.8
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 2.1e-20 103.2 137 46.0
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 3.5e-20 102.4 137 48.9
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 3.5e-20 102.4 139 45.3
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 6.0e-20 101.7 137 45.3
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 7.8e-20 101.3 134 48.5
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 1.0e-19 100.9 137 45.3
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 1.0e-19 100.9 137 45.3
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 1.3e-19 100.5 135 46.7
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 3.0e-19 99.4 136 43.4
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 5.1e-19 98.6 137 43.1
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 6.6e-19 98.2 143 44.1
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 1.1e-18 97.4 132 47.0
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 1.5e-18 97.1 137 43.1
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 4.3e-18 95.5 134 45.5
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 5.6e-18 95.1 139 44.6
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 5.6e-18 95.1 137 43.1
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 1.6e-17 93.6 134 44.8
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 3.6e-17 92.4 137 42.3
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 3.6e-17 92.4 144 45.1
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 4.0e-16 89.0 137 43.1
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 6.9e-16 88.2 136 41.9
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.2e-15 87.4 137 42.3
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 1.2e-15 87.4 137 42.3
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 1.5e-15 87.0 136 41.2
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 1.5e-15 87.0 137 40.1
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 1.5e-15 87.0 137 40.9
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 2.0e-15 86.7 95 53.7
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 2.0e-15 86.7 140 41.4
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 3.4e-15 85.9 136 42.6
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 3.4e-15 85.9 137 41.6
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 4.5e-15 85.5 137 38.7
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 2.9e-14 82.8 137 38.7
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 3.8e-14 82.4 137 38.7
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 3.8e-14 82.4 137 40.1
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 1.1e-13 80.9 137 37.2
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 1.1e-13 80.9 137 37.2
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 1.4e-13 80.5 137 37.2
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 1.4e-13 80.5 135 38.5
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 4.2e-13 79.0 135 37.8
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 4.2e-13 79.0 135 37.8
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 7.1e-13 78.2 135 37.0
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 7.1e-13 78.2 135 37.0
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 9.3e-13 77.8 135 36.3
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 9.3e-13 77.8 137 35.8
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 1.6e-12 77.0 137 35.8
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 2.7e-12 76.3 137 38.7
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 3.5e-12 75.9 134 39.6
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 3.5e-12 75.9 117 41.0
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 1.0e-11 74.3 124 41.1
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 1.0e-11 74.3 134 39.6
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 1.0e-11 74.3 138 39.1
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 1.8e-11 73.6 135 40.0
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 3.9e-11 72.4 130 36.2
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 7.4e-10 68.2 135 37.0
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 9.6e-10 67.8 70 55.7
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 4.8e-09 65.5 126 38.1
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 1.1e-08 64.3 44 77.3
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 6.9e-08 61.6 135 36.3
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 3.4e-07 59.3 65 53.8
CSS0037477 Camellia sinensis var. sinensis HOM05D000739 ORTHO05D109703 1.3e-06 57.4 80 41.2
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 6.4e-06 55.1 64 50.0


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