Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 1.5e-116 422.9 219 100.0
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 3.4e-57 225.7 168 67.9
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 2.3e-53 213.0 168 63.7
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 1.1e-52 210.7 168 63.1
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.5e-52 210.3 157 69.4
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 1.9e-52 209.9 170 62.9
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 1.9e-52 209.9 170 63.5
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 3.3e-52 209.1 163 66.9
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 9.7e-52 207.6 170 61.8
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 9.7e-52 207.6 170 62.4
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 1.3e-51 207.2 174 61.5
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 1.6e-51 206.8 170 62.4
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 1.6e-51 206.8 168 63.7
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 2.8e-51 206.1 170 65.3
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 3.7e-51 205.7 171 60.2
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 3.7e-51 205.7 165 64.8
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 4.8e-51 205.3 156 67.9
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 1.4e-50 203.8 171 63.7
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.4e-50 203.8 174 63.2
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 2.4e-50 203.0 174 61.5
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 2.4e-50 203.0 165 66.1
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 3.1e-50 202.6 170 60.0
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 3.1e-50 202.6 170 58.2
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 4.1e-50 202.2 174 62.6
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 4.1e-50 202.2 170 61.8
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 6.9e-50 201.4 172 58.7
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 9.1e-50 201.1 167 60.5
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.2e-49 200.7 168 60.1
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 1.2e-49 200.7 170 58.2
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.2e-49 200.7 164 63.4
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 1.5e-49 200.3 170 61.2
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 2.6e-49 199.5 171 60.8
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 3.4e-49 199.1 158 65.2
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 3.4e-49 199.1 158 63.3
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 7.7e-49 198.0 170 60.0
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 7.7e-49 198.0 155 63.9
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 1.3e-48 197.2 167 59.3
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 1.7e-48 196.8 170 57.1
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 2.2e-48 196.4 170 59.4
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 2.2e-48 196.4 170 58.2
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 2.9e-48 196.1 181 56.9
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 3.8e-48 195.7 169 59.2
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.8e-48 195.7 159 66.0
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 5.0e-48 195.3 169 59.2
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 5.0e-48 195.3 181 58.0
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 6.5e-48 194.9 170 60.6
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 8.5e-48 194.5 170 60.0
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 8.5e-48 194.5 168 61.9
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 8.5e-48 194.5 169 58.6
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 8.5e-48 194.5 168 59.5
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 8.5e-48 194.5 178 57.9
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 8.5e-48 194.5 167 62.9
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 8.5e-48 194.5 167 62.9
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 1.1e-47 194.1 170 60.0
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.1e-47 194.1 169 58.6
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 1.9e-47 193.4 171 59.6
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.9e-47 193.4 171 59.1
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 2.5e-47 193.0 168 57.7
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 2.5e-47 193.0 169 59.2
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 4.2e-47 192.2 170 58.2
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 5.5e-47 191.8 171 58.5
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 5.5e-47 191.8 171 58.5
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 7.2e-47 191.4 169 58.6
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 9.4e-47 191.0 168 55.4
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 9.4e-47 191.0 178 56.7
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 1.2e-46 190.7 157 61.8
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 2.1e-46 189.9 164 59.8
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 2.7e-46 189.5 170 59.4
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 6.1e-46 188.3 176 55.7
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 7.9e-46 188.0 175 56.0
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 7.9e-46 188.0 165 58.2
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 1.0e-45 187.6 164 57.9
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 1.4e-45 187.2 170 58.2
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 1.4e-45 187.2 186 53.8
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 1.8e-45 186.8 190 53.7
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 1.8e-45 186.8 170 56.5
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 1.8e-45 186.8 168 56.5
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 3.0e-45 186.0 170 56.5
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 5.1e-45 185.3 170 57.6
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 6.7e-45 184.9 170 57.1
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 1.1e-44 184.1 168 56.0
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 1.5e-44 183.7 164 59.1
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.5e-44 183.7 182 57.7
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 2.0e-44 183.3 158 58.9
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 1.3e-43 180.6 165 56.4
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 1.7e-43 180.3 165 57.0
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 1.7e-43 180.3 165 57.0
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 1.7e-43 180.3 158 58.9
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 1.7e-43 180.3 170 55.9
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 1.7e-43 180.3 168 55.4
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 2.2e-43 179.9 165 55.8
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 2.2e-43 179.9 162 56.8
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 4.8e-43 178.7 185 51.4
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 4.8e-43 178.7 165 57.6
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 4.8e-43 178.7 158 58.2
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 1.4e-42 177.2 157 59.9
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 9.1e-42 174.5 165 55.2
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.2e-41 174.1 170 54.7
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 1.4e-39 167.2 177 52.5
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 1.1e-34 151.0 179 46.4
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 1.1e-34 151.0 169 48.5
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 1.4e-34 150.6 166 47.0
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 1.8e-34 150.2 135 58.5
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 7.7e-33 144.8 132 59.1
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 4.1e-26 122.5 170 42.9
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 2.7e-25 119.8 190 42.6
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 4.5e-25 119.0 119 50.4
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 6.8e-21 105.1 167 41.9
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 2.2e-19 100.1 180 37.8
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 2.4e-18 96.7 146 39.0
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 1.0e-16 91.3 145 39.3
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 3.8e-16 89.4 88 58.0
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 8.5e-16 88.2 144 39.6
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 1.7e-08 63.9 60 53.3


User provided reference genes

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