Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 4.9e-71 271.2 150 100.0
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 5.8e-56 221.1 146 82.2
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 1.1e-54 216.9 139 84.2
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 3.4e-32 142.1 142 59.2
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 7.6e-32 141.0 140 56.4
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 1.3e-31 140.2 146 55.5
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 4.9e-31 138.3 136 56.6
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 1.9e-30 136.3 138 55.8
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.9e-30 136.3 142 56.3
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 1.9e-30 136.3 142 56.3
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 2.4e-30 136.0 144 56.2
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 3.2e-30 135.6 140 58.6
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 3.2e-30 135.6 142 56.3
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 3.2e-30 135.6 140 56.4
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 1.2e-29 133.7 132 54.5
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 1.2e-29 133.7 142 57.7
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.2e-29 133.7 142 58.5
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 1.2e-29 133.7 142 54.9
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 1.2e-29 133.7 142 55.6
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 4.6e-29 131.7 144 57.6
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 4.6e-29 131.7 136 56.6
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 6.0e-29 131.3 140 52.9
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 6.0e-29 131.3 139 57.6
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 7.9e-29 131.0 140 55.0
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 7.9e-29 131.0 140 53.6
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 1.3e-28 130.2 140 56.4
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 1.8e-28 129.8 147 50.3
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 1.8e-28 129.8 137 56.2
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 1.8e-28 129.8 141 53.2
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 2.3e-28 129.4 140 55.7
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 2.3e-28 129.4 136 55.1
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 6.7e-28 127.9 136 55.1
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 6.7e-28 127.9 136 55.9
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 1.5e-27 126.7 149 53.0
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 3.3e-27 125.6 139 54.0
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 7.4e-27 124.4 140 52.9
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 7.4e-27 124.4 141 52.5
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 9.6e-27 124.0 136 55.9
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 1.3e-26 123.6 136 50.7
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 3.7e-26 122.1 138 54.3
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 3.7e-26 122.1 145 49.0
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 4.8e-26 121.7 132 52.3
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 6.2e-26 121.3 138 54.3
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 6.2e-26 121.3 138 53.6
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 8.2e-26 120.9 138 54.3
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 1.1e-25 120.6 139 53.2
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 1.4e-25 120.2 136 50.7
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 1.4e-25 120.2 141 50.4
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 1.8e-25 119.8 137 51.1
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 1.8e-25 119.8 139 51.8
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 2.4e-25 119.4 154 47.4
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 2.4e-25 119.4 141 50.4
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 4.0e-25 118.6 141 50.4
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 5.3e-25 118.2 136 52.2
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 9.0e-25 117.5 135 51.9
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 9.0e-25 117.5 139 51.1
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 1.2e-24 117.1 141 49.6
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 2.6e-24 115.9 140 50.0
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 3.4e-24 115.5 125 52.8
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 5.8e-24 114.8 142 50.7
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 5.8e-24 114.8 140 52.1
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 1.0e-23 114.0 138 52.2
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 1.7e-23 113.2 138 48.6
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 2.2e-23 112.8 104 59.6
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 2.2e-23 112.8 136 48.5
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 2.2e-23 112.8 147 46.3
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 3.8e-23 112.1 135 48.1
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 1.9e-22 109.8 136 47.1
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 3.2e-22 109.0 135 48.1
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 1.6e-21 106.7 135 45.9
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 2.1e-21 106.3 136 46.3
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.7e-21 105.9 136 49.3
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 4.6e-21 105.1 134 47.8
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 4.6e-21 105.1 131 45.0
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 6.0e-21 104.8 136 47.1
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 7.9e-21 104.4 139 46.0
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 7.9e-21 104.4 136 46.3
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 1.3e-20 103.6 133 48.1
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 2.3e-20 102.8 136 45.6
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 3.0e-20 102.4 133 47.4
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 3.9e-20 102.1 135 48.1
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 3.9e-20 102.1 134 47.8
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 5.1e-20 101.7 138 45.7
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 8.7e-20 100.9 140 45.0
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.1e-19 100.5 136 45.6
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 1.5e-19 100.1 136 47.8
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 1.5e-19 100.1 134 46.3
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 1.5e-19 100.1 136 44.1
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 1.9e-19 99.8 135 49.6
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 3.3e-19 99.0 134 45.5
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 4.3e-19 98.6 136 44.9
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 7.4e-19 97.8 136 47.1
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 7.4e-19 97.8 143 44.1
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 9.7e-19 97.4 137 44.5
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 9.7e-19 97.4 136 43.4
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 2.2e-18 96.3 134 44.8
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 2.2e-18 96.3 136 44.1
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 4.8e-18 95.1 136 42.6
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 6.3e-18 94.7 132 45.5
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 8.2e-18 94.4 138 43.5
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 1.8e-17 93.2 136 43.4
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 2.4e-17 92.8 136 41.2
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 3.1e-17 92.4 135 42.2
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 4.1e-17 92.0 136 41.9
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 2.6e-16 89.4 134 44.0
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 4.5e-16 88.6 136 39.7
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 1.7e-15 86.7 135 40.7
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 2.2e-15 86.3 134 44.0
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 2.2e-15 86.3 134 41.0
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 3.8e-15 85.5 136 38.2
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 1.9e-14 83.2 135 40.0
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 3.2e-14 82.4 138 41.3
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 3.2e-14 82.4 136 39.0
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 4.2e-14 82.0 135 38.5
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 4.2e-14 82.0 135 38.5
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 4.2e-14 82.0 135 38.5
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 4.2e-14 82.0 136 41.2
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 7.2e-14 81.3 135 39.3
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 9.3e-14 80.9 89 52.8
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 1.2e-13 80.5 135 38.5
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 1.2e-13 80.5 135 38.5
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 1.2e-13 80.5 140 40.7
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 1.6e-13 80.1 135 38.5
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 1.6e-13 80.1 135 38.5
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 2.1e-13 79.7 135 37.0
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 2.1e-13 79.7 135 37.8
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 2.1e-13 79.7 135 37.8
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.1e-13 79.7 136 39.0
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 2.1e-13 79.7 136 39.0
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 3.6e-13 79.0 123 43.1
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 6.1e-13 78.2 136 36.0
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 6.1e-13 78.2 136 38.2
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 7.9e-13 77.8 135 36.3
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 1.8e-12 76.6 136 36.8
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 3.0e-12 75.9 116 42.2
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 3.9e-12 75.5 138 40.6
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 5.1e-12 75.1 136 36.0
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 1.5e-11 73.6 136 36.8
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 2.5e-11 72.8 135 39.3
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 9.7e-11 70.9 132 37.9
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 2.2e-10 69.7 136 38.2
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 2.2e-10 69.7 130 36.2
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 2.8e-10 69.3 132 37.9
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 1.8e-09 66.6 134 36.6
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 5.3e-09 65.1 126 38.1
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 1.2e-08 63.9 70 52.9
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 4.5e-08 62.0 44 70.5
CSS0037477 Camellia sinensis var. sinensis HOM05D000739 ORTHO05D109703 8.5e-07 57.8 102 35.3
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 1.4e-06 57.0 133 33.8
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 7.2e-06 54.7 65 47.7


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