Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0002810 Simmondsia chinensis HOM05D009035 ORTHO05D011039 9.8e-68 260.0 131 100.0
QL09p029860 Quercus lobata HOM05D009035 ORTHO05D011039 7.4e-15 84.3 73 61.6
QL09p030163 Quercus lobata HOM05D009035 ORTHO05D011039 7.4e-15 84.3 73 61.6
Gohir.D03G062801 Gossypium hirsutum HOM05D009035 ORTHO05D011039 9.6e-15 84.0 75 58.7
Potri.005G184450 Populus trichocarpa HOM05D009035 ORTHO05D011039 8.2e-14 80.9 75 56.0
Sed0005031 Sechium edule HOM05D009035 ORTHO05D011039 1.4e-13 80.1 66 60.6
EL10Ac1g01393 Beta vulgaris HOM05D009035 ORTHO05D011039 2.4e-13 79.3 69 66.7
Potri.002G075850 Populus trichocarpa HOM05D009035 ORTHO05D011039 6.9e-13 77.8 75 56.0
COL.COLO4_28339 Corchorus olitorius HOM05D009035 ORTHO05D011039 1.2e-12 77.0 87 49.4
ClCG11G008460 Citrullus lanatus HOM05D009035 ORTHO05D011039 2.0e-12 76.3 68 55.9
Migut.C01083 Erythranthe guttata HOM05D009035 ORTHO05D011039 1.7e-11 73.2 75 57.3
Sabra05G0141100 Salix brachista HOM05D009035 ORTHO05D011039 2.2e-11 72.8 108 45.4
CiPaw.15G025000 Carya illinoinensis HOM05D009035 ORTHO05D011039 3.8e-11 72.0 67 58.2
Migut.C01084 Erythranthe guttata HOM05D009035 ORTHO05D011039 3.8e-11 72.0 75 56.0
Glyma.14G158750 Glycine max HOM05D009035 ORTHO05D011039 6.5e-11 71.2 74 58.1
Glyma.13G035950 Glycine max HOM05D009035 ORTHO05D011039 1.4e-10 70.1 84 53.6
EL10Ac8g19780 Beta vulgaris HOM05D009035 ORTHO05D011039 1.9e-10 69.7 65 63.1
Manes.02G171850 Manihot esculenta HOM05D009035 ORTHO05D011039 2.5e-10 69.3 69 56.5
CAN.G46.17 Capsicum annuum HOM05D009035 ORTHO05D011039 4.2e-10 68.6 73 57.5
Carub.0006s2697 Capsella rubella HOM05D009035 ORTHO05D011039 5.5e-10 68.2 58 58.6
Ca_16623_v3 Cicer arietinum L. HOM05D009035 ORTHO05D011039 7.2e-10 67.8 64 59.4
Lalb_Chr04g0253631 Lupinus albus HOM05D009035 ORTHO05D011039 9.3e-10 67.4 71 60.6
CsaV3_7G022120 Cucumis sativus L. HOM05D009035 ORTHO05D011039 1.6e-09 66.6 68 47.1
DCAR_016721 Daucus carota HOM05D009035 ORTHO05D011039 6.1e-09 64.7 74 48.6
Lalb_Chr08g0240971 Lupinus albus HOM05D009035 ORTHO05D011039 7.9e-09 64.3 74 52.7
A03p28030 Brassica napus HOM05D009035 ORTHO05D011039 2.3e-08 62.8 72 51.4
Oeu045983.1 Olea europaea HOM05D009035 ORTHO05D011039 3.0e-08 62.4 71 52.1
Sed0013478 Sechium edule HOM05D009035 ORTHO05D011039 3.0e-08 62.4 55 54.5
Solyc04g063220.1 Solanum lycopersicum HOM05D009035 ORTHO05D011039 1.9e-07 59.7 77 49.4
C03p33890 Brassica napus HOM05D009035 ORTHO05D011039 2.5e-07 59.3 72 50.0
CiPaw.16G019900 Carya illinoinensis HOM05D009035 ORTHO05D011039 5.7e-07 58.2 74 45.9
arahy.Tifrunner.gnm1.ann1.ECT8PE Arachis hypogaea HOM05D009035 ORTHO05D011039 7.4e-07 57.8 78 50.0
Nn1g08927 Nelumbo nucifera HOM05D009035 ORTHO05D011039 7.4e-07 57.8 68 45.6
Lsat_1_v5_gn_1_10260 Lactuca sativa HOM05D009035 ORTHO05D011039 9.7e-07 57.4 75 44.0
Lalb_Chr11g0066261 Lupinus albus HOM05D009035 ORTHO05D011039 8.2e-06 54.3 74 45.9


User provided reference genes

Program Settings