Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0002160 Simmondsia chinensis HOM05D006365 ORTHO05D007893 5.5e-69 264.2 139 100.0
EL10Ac5g10447 Beta vulgaris HOM05D006365 ORTHO05D007893 5.3e-11 71.6 114 43.0
Hund09578 Selenicereus undatus HOM05D006365 ORTHO05D007893 9.9e-10 67.4 104 43.3
Dinv34587 Davidia involucrata HOM05D006365 ORTHO05D007893 2.2e-09 66.2 78 48.7
PGSC0003DMG400019907 Solanum tuberosum HOM05D006365 ORTHO05D007893 1.4e-08 63.5 102 42.2
Solyc09g066130.4 Solanum lycopersicum HOM05D006365 ORTHO05D007893 1.9e-08 63.2 104 40.4
Sopen09g027890 Solanum pennellii HOM05D006365 ORTHO05D007893 1.9e-08 63.2 102 42.2
AUR62032234 Chenopodium quinoa HOM05D006365 ORTHO05D007893 2.4e-08 62.8 83 44.6
AUR62011919 Chenopodium quinoa HOM05D006365 ORTHO05D007893 3.2e-08 62.4 116 37.9
Gohir.A08G061000 Gossypium hirsutum HOM05D006365 ORTHO05D007893 4.2e-08 62.0 95 42.1
Dinv22456 Davidia involucrata HOM05D006365 ORTHO05D007893 5.4e-08 61.6 78 44.9
Gorai.004G074000 Gossypium raimondii HOM05D006365 ORTHO05D007893 9.3e-08 60.8 89 42.7
Thecc.01G264700 Theobroma cacao HOM05D006365 ORTHO05D007893 9.3e-08 60.8 92 42.4
Ca_09701_v3 Cicer arietinum L. HOM05D006365 ORTHO05D007893 1.2e-07 60.5 62 56.5
Medtr1g070375 Medicago truncatula HOM05D006365 ORTHO05D007893 1.6e-07 60.1 60 46.7
Ciclev10019917m.g Citrus clementina HOM05D006365 ORTHO05D007893 2.1e-07 59.7 104 38.5
MSTRG.18301 Avicennia marina HOM05D006365 ORTHO05D007893 4.6e-07 58.5 81 38.3
Nitab4.5_0000187g0360 Nicotiana tabacum HOM05D006365 ORTHO05D007893 4.6e-07 58.5 97 38.1
COL.COLO4_08271 Corchorus olitorius HOM05D006365 ORTHO05D007893 6.0e-07 58.2 71 46.5
GSVIVG01000761001 Vitis vinifera HOM05D006365 ORTHO05D007893 6.0e-07 58.2 71 40.8
Lj5g0002733 Lotus japonicus HOM05D006365 ORTHO05D007893 7.9e-07 57.8 91 41.8
Actinidia33762 Actinidia chinensis HOM05D006365 ORTHO05D007893 1.0e-06 57.4 79 40.5
Migut.D00394 Erythranthe guttata HOM05D006365 ORTHO05D007893 1.0e-06 57.4 109 37.6
Psat6g056320 Pisum sativum HOM05D006365 ORTHO05D007893 1.3e-06 57.0 97 38.1
TPR.G9050 Trifolium pratense HOM05D006365 ORTHO05D007893 1.3e-06 57.0 54 53.7
Duzib211G0170 Durio zibethinus HOM05D006365 ORTHO05D007893 1.7e-06 56.6 97 41.2
Glyma.10G034000 Glycine max HOM05D006365 ORTHO05D007893 1.7e-06 56.6 94 37.2
Sc17g0000830 Simmondsia chinensis HOM05D006365 ORTHO05D007893 1.7e-06 56.6 46 56.5
Gohir.A11G128200 Gossypium hirsutum HOM05D006365 ORTHO05D007893 2.3e-06 56.2 94 40.4
Prupe.8G229800 Prunus persica HOM05D006365 ORTHO05D007893 2.3e-06 56.2 80 36.2
RcHm_v2.0_Chr6g0289161 Rosa chinensis HOM05D006365 ORTHO05D007893 2.3e-06 56.2 84 36.9
SalBow4G1819 Salvia bowleyana HOM05D006365 ORTHO05D007893 2.3e-06 56.2 109 32.1
CSS0000446 Camellia sinensis var. sinensis HOM05D006365 ORTHO05D007893 3.0e-06 55.8 95 32.6
CSS0009937 Camellia sinensis var. sinensis HOM05D006365 ORTHO05D007893 3.0e-06 55.8 95 32.6
Nitab4.5_0004328g0020 Nicotiana tabacum HOM05D006365 ORTHO05D007893 3.0e-06 55.8 102 38.2
Manes.01G200300 Manihot esculenta HOM05D006365 ORTHO05D007893 3.9e-06 55.5 115 37.4
Gohir.D11G134100 Gossypium hirsutum HOM05D006365 ORTHO05D007893 6.6e-06 54.7 94 39.4
FvH4_2g22240 Fragaria vesca HOM05D006365 ORTHO05D007893 8.7e-06 54.3 87 36.8
FAN24G0578 Fragaria x ananassa HOM05D006365 ORTHO05D007893 8.7e-06 54.3 87 36.8


User provided reference genes

Program Settings