Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 1.6e-244 849.0 420 100.0
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 9.9e-146 520.8 397 63.5
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 2.4e-144 516.2 396 63.1
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 4.2e-144 515.4 387 64.3
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 1.7e-142 510.0 389 64.3
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 1.7e-142 510.0 389 61.7
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.9e-141 506.5 389 63.0
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 5.6e-141 505.0 387 63.6
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 5.6e-141 505.0 390 62.6
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 9.6e-141 504.2 388 63.1
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 4.8e-140 501.9 389 62.7
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 8.1e-140 501.1 388 62.1
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 8.1e-140 501.1 396 60.1
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 1.1e-139 500.7 382 63.4
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.4e-139 499.6 388 62.9
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 9.0e-139 497.7 384 62.8
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 1.2e-138 497.3 388 62.4
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 1.2e-138 497.3 387 61.0
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 1.5e-138 496.9 391 61.9
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 2.6e-138 496.1 388 60.8
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 2.6e-138 496.1 385 61.3
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 3.4e-138 495.7 385 63.6
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 3.4e-138 495.7 390 62.3
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 3.4e-138 495.7 388 62.9
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 4.5e-138 495.4 385 60.5
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 5.8e-138 495.0 388 61.9
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 5.8e-138 495.0 397 61.5
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 5.8e-138 495.0 392 61.2
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 1.7e-137 493.4 385 61.3
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 4.9e-137 491.9 387 61.5
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 1.1e-136 490.7 387 61.5
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 1.4e-136 490.3 394 61.4
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 1.9e-136 490.0 389 61.2
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 2.4e-136 489.6 393 61.6
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 4.2e-136 488.8 387 61.2
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 4.2e-136 488.8 396 58.3
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 5.4e-136 488.4 394 61.4
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 1.2e-135 487.3 400 58.5
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 2.7e-135 486.1 396 59.8
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 4.6e-135 485.3 388 60.8
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 6.0e-135 485.0 395 60.0
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 7.9e-135 484.6 390 57.4
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 1.8e-134 483.4 387 59.7
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 3.0e-134 482.6 389 59.4
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 3.0e-134 482.6 400 58.0
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 3.0e-134 482.6 400 58.5
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 6.7e-134 481.5 389 59.1
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 1.5e-133 480.3 391 57.5
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 2.5e-133 479.6 400 58.0
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 3.3e-133 479.2 386 60.4
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 7.4e-133 478.0 367 61.9
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 7.4e-133 478.0 367 61.9
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 9.6e-133 477.6 386 59.8
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 6.2e-132 474.9 388 60.6
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 1.1e-131 474.2 387 58.4
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 1.8e-131 473.4 388 60.3
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 2.4e-131 473.0 410 57.6
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 9.9e-130 467.6 390 59.0
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 4.9e-129 465.3 382 60.7
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 9.3e-128 461.1 387 58.9
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 2.7e-127 459.5 388 59.0
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 3.5e-127 459.1 390 59.7
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 1.8e-126 456.8 386 58.0
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 2.3e-126 456.4 390 59.2
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 1.1e-125 454.1 381 58.3
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 1.1e-125 454.1 381 58.3
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 4.8e-124 448.7 386 57.0
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 6.2e-124 448.4 386 58.3
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 8.2e-124 448.0 391 56.5
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 1.8e-123 446.8 381 57.2
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 1.8e-123 446.8 387 56.3
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 2.4e-123 446.4 390 55.6
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 3.1e-123 446.0 382 59.2
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 4.0e-123 445.7 389 55.5
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 5.3e-123 445.3 401 58.1
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 6.9e-123 444.9 384 57.0
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 1.2e-122 444.1 382 56.3
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 1.2e-122 444.1 381 57.0
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 4.5e-122 442.2 393 56.0
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 5.8e-122 441.8 381 56.2
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 2.2e-121 439.9 376 56.4
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 1.9e-120 436.8 391 57.5
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 2.3e-118 429.9 342 58.2
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 1.1e-117 427.6 387 55.8
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 1.1e-115 421.0 376 54.3
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 3.1e-115 419.5 367 55.3
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 6.9e-115 418.3 395 52.9
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 6.1e-111 405.2 387 53.7
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 1.4e-107 394.0 390 49.0
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 2.4e-107 393.3 345 56.2
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 1.0e-105 387.9 357 53.5
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 1.4e-104 384.0 388 52.1
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 2.5e-104 383.3 311 58.5
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.7e-100 369.4 275 63.3
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 1.5e-98 364.0 351 53.0
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 7.7e-90 335.1 389 42.7
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 3.2e-88 329.7 238 63.9
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 3.0e-86 323.2 369 45.3
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 3.8e-81 306.2 375 41.9
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 3.2e-80 303.1 268 57.1
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 6.1e-79 298.9 395 40.3
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 6.1e-79 298.9 257 56.4
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 2.9e-73 280.0 190 68.4
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 2.8e-68 263.5 188 64.9
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 3.0e-62 243.4 157 71.3
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.2e-59 233.4 251 49.4
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.3e-56 223.0 189 58.2
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 1.9e-51 207.6 228 45.2
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.2e-47 194.9 160 60.6
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 3.6e-47 193.4 195 51.8
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 1.8e-46 191.0 426 29.1
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 2.6e-45 187.2 185 53.5
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 9.2e-43 178.7 146 60.3
Dinv43574 Davidia involucrata HOM05D005798 ORTHO05D007269 6.6e-41 172.6 109 74.3
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.2e-39 168.3 136 58.1
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 6.8e-38 162.5 143 58.7
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 4.4e-37 159.8 412 26.9
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 5.4e-35 152.9 221 38.5
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 7.1e-35 152.5 171 47.4
Atru.chr5.134 Acer truncatum HOM05D005798 ORTHO05D007269 1.2e-34 151.8 92 76.1
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 1.2e-34 151.8 364 29.7
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 3.3e-32 143.7 145 47.6
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 2.4e-30 137.5 141 51.8
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.0e-29 134.4 92 65.2
CAN.G74.38 Capsicum annuum HOM05D005798 ORTHO05D007269 9.3e-27 125.6 92 69.6
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 2.5e-24 117.5 84 65.5
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 5.8e-21 106.3 244 31.1
MCO12G177 Micromonas commoda HOM05D005798 ORTHO05D007269 4.9e-20 103.2 457 24.7
HPP92_011700 Vanilla planifolia HOM05D005798 ORTHO05D007269 6.4e-20 102.8 226 31.9
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 7.1e-11 72.8 85 45.9
TAR375G0441 Trochodendron aralioides HOM05D005798 ORTHO05D007269 6.0e-10 69.7 54 61.1
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 6.2e-07 59.7 71 49.3
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 6.9e-06 56.2 102 37.3


User provided reference genes

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