Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 1.4e-65 252.7 119 100.0
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 8.7e-47 190.3 118 72.0
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 6.2e-45 184.1 119 71.4
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 6.2e-45 184.1 119 69.7
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 1.8e-44 182.6 119 72.3
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 6.9e-44 180.6 119 68.9
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 6.9e-44 180.6 119 65.5
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 6.9e-44 180.6 119 65.5
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 1.2e-43 179.9 119 68.1
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 1.5e-43 179.5 119 68.1
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.2e-42 175.6 119 67.2
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.2e-42 175.6 119 67.2
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 2.9e-42 175.3 119 64.7
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 2.9e-42 175.3 119 67.2
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 2.9e-42 175.3 119 67.2
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 3.8e-42 174.9 117 66.7
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 3.8e-42 174.9 119 65.5
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 6.4e-42 174.1 119 67.2
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 8.4e-42 173.7 119 66.4
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 8.4e-42 173.7 119 66.4
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 1.1e-41 173.3 119 67.2
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 1.1e-41 173.3 119 65.5
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 2.4e-41 172.2 119 67.2
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 2.4e-41 172.2 119 64.7
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 3.2e-41 171.8 119 64.7
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 4.2e-41 171.4 118 63.6
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 5.4e-41 171.0 119 64.7
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 7.1e-41 170.6 119 64.7
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 9.3e-41 170.2 119 64.7
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 9.3e-41 170.2 119 65.5
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 1.2e-40 169.9 118 62.7
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 1.6e-40 169.5 119 63.0
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 2.1e-40 169.1 119 64.7
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 3.5e-40 168.3 119 64.7
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 4.6e-40 167.9 119 63.9
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 7.9e-40 167.2 119 64.7
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 1.3e-39 166.4 118 62.7
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 3.0e-39 165.2 119 63.9
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 3.9e-39 164.9 117 64.1
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 5.1e-39 164.5 117 64.1
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 5.1e-39 164.5 117 64.1
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 1.9e-38 162.5 120 63.3
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 2.5e-38 162.2 119 61.3
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 3.3e-38 161.8 119 64.7
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 3.3e-38 161.8 118 61.0
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 4.3e-38 161.4 119 63.0
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 5.6e-38 161.0 119 60.5
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 7.4e-38 160.6 117 63.2
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 7.4e-38 160.6 119 62.2
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 9.6e-38 160.2 119 58.0
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 2.1e-37 159.1 119 59.7
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 2.8e-37 158.7 119 60.5
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 2.8e-37 158.7 118 61.9
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 4.8e-37 157.9 118 61.0
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 6.2e-37 157.5 119 59.7
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 6.2e-37 157.5 119 63.0
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 1.1e-36 156.8 119 60.5
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.1e-36 155.2 108 63.0
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 4.0e-36 154.8 119 60.5
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 5.3e-36 154.5 119 59.7
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 5.3e-36 154.5 121 59.5
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 6.9e-36 154.1 119 60.5
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 6.9e-36 154.1 119 60.5
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 6.9e-36 154.1 119 60.5
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 6.9e-36 154.1 119 58.0
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 9.0e-36 153.7 119 60.5
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 1.2e-35 153.3 119 61.3
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 2.6e-35 152.1 119 57.1
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 3.4e-35 151.8 121 57.9
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 4.5e-35 151.4 119 59.7
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 5.8e-35 151.0 119 60.5
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 7.6e-35 150.6 119 58.8
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 1.7e-34 149.4 120 60.0
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 2.9e-34 148.7 119 58.8
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 3.8e-34 148.3 121 57.0
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 6.5e-34 147.5 119 58.8
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 8.4e-34 147.1 119 58.0
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 1.4e-33 146.4 119 55.5
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 1.9e-33 146.0 119 57.1
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 1.9e-33 146.0 119 58.0
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 3.2e-33 145.2 95 66.3
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 3.2e-33 145.2 119 55.5
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 4.2e-33 144.8 119 56.3
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 5.5e-33 144.4 119 57.1
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 5.5e-33 144.4 119 57.1
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 7.1e-33 144.1 119 58.0
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 2.1e-32 142.5 119 58.0
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 3.5e-32 141.7 119 54.6
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 2.3e-31 139.0 91 63.7
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 6.7e-31 137.5 118 53.4
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 1.1e-30 136.7 119 53.8
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.5e-30 135.6 119 53.8
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 3.3e-30 135.2 97 61.9
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 3.7e-29 131.7 92 62.0
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 1.4e-28 129.8 91 60.4
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 9.0e-28 127.1 119 46.2
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 1.2e-27 126.7 137 46.7
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.5e-27 126.3 119 45.4
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 7.6e-27 124.0 117 52.1
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 1.3e-26 123.2 119 53.8
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 1.3e-26 123.2 119 53.8
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 7.2e-25 117.5 90 58.9
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 1.0e-23 113.6 91 57.1
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 1.1e-22 110.2 113 45.1
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 9.7e-22 107.1 96 49.0
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 2.8e-21 105.5 91 50.5
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 2.8e-21 105.5 91 50.5
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 8.2e-21 104.0 91 51.6
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 8.2e-21 104.0 91 51.6
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 1.8e-20 102.8 121 43.0
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 2.4e-20 102.4 117 41.9
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 1.2e-19 100.1 121 43.0
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 3.4e-19 98.6 62 69.4
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 3.4e-19 98.6 119 45.4
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 3.8e-18 95.1 120 42.5
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 2.5e-17 92.4 120 41.7
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 3.2e-17 92.0 147 37.4
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 1.2e-16 90.1 120 42.5
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 3.9e-15 85.1 111 39.6
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 1.1e-14 83.6 54 63.0
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 2.0e-14 82.8 94 44.7
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 1.3e-13 80.1 121 36.4
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 1.3e-13 80.1 63 60.3
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 1.7e-13 79.7 54 63.0
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 6.9e-12 74.3 54 59.3
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 1.3e-10 70.1 50 60.0
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 4.7e-08 61.6 53 43.4


User provided reference genes

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