Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0000200 Simmondsia chinensis HOM05D013332 ORTHO05D004477 9.7e-95 350.1 176 100.0
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 3.3e-26 122.5 150 52.7
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 1.0e-11 74.3 143 37.1
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 3.9e-11 72.4 143 39.2
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 5.1e-11 72.0 144 37.5
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 8.7e-11 71.2 133 36.8
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 1.1e-10 70.9 143 37.1
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 1.5e-10 70.5 144 38.9
Gohir.A05G265833 Gossypium hirsutum HOM05D008046 ORTHO05D004477 4.3e-10 68.9 150 40.0
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 5.6e-10 68.6 133 37.6
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 7.4e-10 68.2 143 39.9
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 1.6e-09 67.0 143 37.8
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 2.8e-09 66.2 139 38.8
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 4.8e-09 65.5 140 37.9
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 6.2e-09 65.1 142 36.6
RcHm_v2.0_Chr2g0112381 Rosa chinensis HOM05D013332 ORTHO05D004477 8.1e-09 64.7 156 39.1
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 1.1e-08 64.3 142 33.1
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 1.4e-08 63.9 134 41.0
FAN23G0907 Fragaria x ananassa HOM05D013332 ORTHO05D004477 1.8e-08 63.5 156 38.5
FAN26G3011 Fragaria x ananassa HOM05D013332 ORTHO05D004477 1.8e-08 63.5 156 38.5
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 1.8e-08 63.5 143 40.6
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 2.4e-08 63.2 135 35.6
EL10Ac1g01145 Beta vulgaris HOM05D008046 ORTHO05D004477 3.1e-08 62.8 178 33.1
FAN28G1274 Fragaria x ananassa HOM05D013332 ORTHO05D004477 4.0e-08 62.4 156 37.8
Duzib264G0386 Durio zibethinus HOM05D008176 ORTHO05D004477 5.3e-08 62.0 142 40.1
Gorai.009G280100 Gossypium raimondii HOM05D008046 ORTHO05D004477 5.3e-08 62.0 122 41.0
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 5.3e-08 62.0 136 36.8
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 6.9e-08 61.6 167 34.1
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 1.5e-07 60.5 148 37.2
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.5e-07 60.5 143 35.7
FAN19G2695 Fragaria x ananassa HOM05D013332 ORTHO05D004477 4.5e-07 58.9 156 36.5
Gohir.D05G267950 Gossypium hirsutum HOM05D008046 ORTHO05D004477 4.5e-07 58.9 148 37.2
PGSC0003DMG400016792 Solanum tuberosum HOM05D008176 ORTHO05D004477 4.5e-07 58.9 143 37.1
FvH4_1g20240 Fragaria vesca HOM05D013332 ORTHO05D004477 5.8e-07 58.5 156 36.5
Lalb_Chr10g0102531 Lupinus albus HOM05D008046 ORTHO05D004477 5.8e-07 58.5 157 34.4
DCAR_019289 Daucus carota HOM05D008046 ORTHO05D004477 1.3e-06 57.4 143 33.6
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.2e-06 56.6 141 35.5
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 2.2e-06 56.6 135 38.5
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 2.9e-06 56.2 144 33.3
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 2.9e-06 56.2 140 35.7
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 2.9e-06 56.2 150 38.0
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 2.9e-06 56.2 141 36.2
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.8e-06 55.8 141 35.5
Ah.02g126210 Amaranthus hybridus HOM05D031888 ORTHO05D004477 4.9e-06 55.5 159 30.2
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 4.9e-06 55.5 136 33.1
Gorai.007G059700 Gossypium raimondii HOM05D008176 ORTHO05D004477 6.4e-06 55.1 145 34.5
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 6.4e-06 55.1 141 34.8
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 6.4e-06 55.1 135 34.1
Glyma.06G100900 Glycine max HOM05D008046 ORTHO05D004477 8.4e-06 54.7 143 36.4
Sabra07G0080300 Salix brachista HOM05D008176 ORTHO05D004477 8.4e-06 54.7 134 35.1
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 8.4e-06 54.7 143 34.3


User provided reference genes

Program Settings