Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc25g0005370 Simmondsia chinensis HOM05D007260 ORTHO05D009149 3.9e-111 404.8 206 100.0
vmacro21973 Vaccinium macrocarpon HOM05D007260 ORTHO05D009149 3.3e-54 215.7 208 57.2
Ciclev10005732m.g Citrus clementina HOM05D007260 ORTHO05D009149 5.7e-54 214.9 206 56.3
Atru.chr1.1150 Acer truncatum HOM05D007260 ORTHO05D009149 4.8e-53 211.8 209 55.5
CiPaw.10G035100 Carya illinoinensis HOM05D007260 ORTHO05D009149 4.8e-53 211.8 206 55.8
Potri.006G046350 Populus trichocarpa HOM05D007260 ORTHO05D009149 1.8e-52 209.9 208 55.3
Cfa016789 Carpinus fangiana HOM05D007260 ORTHO05D009149 5.3e-52 208.4 206 54.9
EL10Ac3g07131 Beta vulgaris HOM05D007260 ORTHO05D009149 1.6e-51 206.8 212 53.8
CANSAT80G0389 Cannabis sativa HOM05D007260 ORTHO05D009149 1.6e-51 206.8 211 53.1
Sabra06G0031900 Salix brachista HOM05D007260 ORTHO05D009149 2.0e-51 206.5 208 54.3
AUR62024501 Chenopodium quinoa HOM05D007260 ORTHO05D009149 4.5e-51 205.3 208 53.4
AUR62026087 Chenopodium quinoa HOM05D007260 ORTHO05D009149 4.5e-51 205.3 208 53.4
QL07p003043 Quercus lobata HOM05D007260 ORTHO05D009149 1.0e-50 204.1 206 54.4
CANSAT80G1528 Cannabis sativa HOM05D007260 ORTHO05D009149 2.9e-50 202.6 211 52.1
Thecc.05G151300 Theobroma cacao HOM05D007260 ORTHO05D009149 2.9e-50 202.6 206 54.4
GSVIVG01033239001 Vitis vinifera HOM05D007260 ORTHO05D009149 2.9e-50 202.6 207 51.2
SalBow6G2074 Salvia bowleyana HOM05D007260 ORTHO05D009149 5.0e-50 201.8 205 52.7
Sed0015422 Sechium edule HOM05D007260 ORTHO05D009149 6.5e-50 201.4 207 52.7
CsaV3_6G012930 Cucumis sativus L. HOM05D007260 ORTHO05D009149 8.5e-50 201.1 209 51.2
Cpa.g.sc182.9 Carica papaya HOM05D007260 ORTHO05D009149 1.1e-49 200.7 207 53.6
Gohir.A02G107109 Gossypium hirsutum HOM05D007260 ORTHO05D009149 1.1e-49 200.7 206 52.9
ClCG04G003650 Citrullus lanatus HOM05D007260 ORTHO05D009149 1.5e-49 200.3 208 51.4
Rhsim03G0028400 Rhododendron simsii HOM05D007260 ORTHO05D009149 1.5e-49 200.3 239 50.2
SalBow6G0663 Salvia bowleyana HOM05D007260 ORTHO05D009149 2.5e-49 199.5 205 52.2
Duzib106G0310 Durio zibethinus HOM05D007260 ORTHO05D009149 3.2e-49 199.1 200 54.5
TAR633G2662 Trochodendron aralioides HOM05D007260 ORTHO05D009149 3.2e-49 199.1 207 52.2
Gorai.003G087400 Gossypium raimondii HOM05D007260 ORTHO05D009149 4.2e-49 198.7 205 53.2
Gohir.D03G072400 Gossypium hirsutum HOM05D007260 ORTHO05D009149 5.5e-49 198.4 205 53.2
Eucgr.K01719 Eucalyptus grandis HOM05D007260 ORTHO05D009149 1.2e-48 197.2 206 50.5
Eucgr.K02009 Eucalyptus grandis HOM05D007260 ORTHO05D009149 1.2e-48 197.2 206 51.5
Lj1C1126T6 Lonicera japonica HOM05D007260 ORTHO05D009149 1.2e-48 197.2 205 52.2
MSTRG.19844 Avicennia marina HOM05D007260 ORTHO05D009149 1.6e-48 196.8 207 51.2
Ah.13g076600 Amaranthus hybridus HOM05D007260 ORTHO05D009149 1.0e-47 194.1 203 51.7
TWI74G0992 Tripterygium wilfordii HOM05D007260 ORTHO05D009149 1.0e-47 194.1 210 51.9
Oeu023130.1 Olea europaea HOM05D007260 ORTHO05D009149 5.2e-47 191.8 205 49.8
COL.COLO4_22299 Corchorus olitorius HOM05D007260 ORTHO05D009149 1.5e-46 190.3 213 51.2
FvH4_6g24410 Fragaria vesca HOM05D007260 ORTHO05D009149 3.3e-46 189.1 214 50.5
Migut.J01731 Erythranthe guttata HOM05D007260 ORTHO05D009149 5.7e-46 188.3 206 49.5
Carub.0004s2386 Capsella rubella HOM05D007260 ORTHO05D009149 7.5e-46 188.0 211 48.3
RcHm_v2.0_Chr3g0483391 Rosa chinensis HOM05D007260 ORTHO05D009149 1.7e-45 186.8 209 51.7
Hund19138 Selenicereus undatus HOM05D007260 ORTHO05D009149 2.2e-45 186.4 203 51.2
Cc06_g17880 Coffea canephora HOM05D007260 ORTHO05D009149 8.2e-45 184.5 217 53.5
Ca_08430_v3 Cicer arietinum L. HOM05D007260 ORTHO05D009149 1.8e-44 183.3 200 50.5
Lsat_1_v5_gn_5_160501 Lactuca sativa HOM05D007260 ORTHO05D009149 4.1e-44 182.2 206 47.1
ECA248G0818 Erigeron canadensis HOM05D007260 ORTHO05D009149 5.3e-44 181.8 206 48.1
Thhalv10017244m.g Eutrema salsugineum HOM05D007260 ORTHO05D009149 7.0e-44 181.4 207 48.3
Aa31LG1G23620 Aethionema arabicum HOM05D007260 ORTHO05D009149 4.5e-43 178.7 202 48.5
Lalb_Chr01g0017381 Lupinus albus HOM05D007260 ORTHO05D009149 4.5e-43 178.7 193 51.8
THA.LOC104802057 Tarenaya hassleriana HOM05D007260 ORTHO05D009149 4.5e-43 178.7 208 47.1
FAN02G1162 Fragaria x ananassa HOM05D007260 ORTHO05D009149 5.9e-43 178.3 219 48.4
MD14G1076800 Malus domestica HOM05D007260 ORTHO05D009149 5.9e-43 178.3 212 48.6
Psat3g074400 Pisum sativum HOM05D007260 ORTHO05D009149 5.9e-43 178.3 199 51.3
Prupe.7G054700 Prunus persica HOM05D007260 ORTHO05D009149 5.9e-43 178.3 210 49.0
Medtr7g091050 Medicago truncatula HOM05D007260 ORTHO05D009149 7.7e-43 177.9 200 51.0
SGA_v2.0_scaffold105G30380 Striga asiatica HOM05D007260 ORTHO05D009149 7.7e-43 177.9 206 46.1
Lj1g0013385 Lotus japonicus HOM05D007260 ORTHO05D009149 3.8e-42 175.6 206 49.0
AT2G41600 Arabidopsis thaliana HOM05D007260 ORTHO05D009149 1.1e-41 174.1 212 44.8
Nitab4.5_0000826g0300 Nicotiana tabacum HOM05D007260 ORTHO05D009149 1.1e-41 174.1 209 47.4
Phvul.008G158118 Phaseolus vulgaris HOM05D007260 ORTHO05D009149 1.1e-41 174.1 200 50.5
Nn2g15147 Nelumbo nucifera HOM05D007260 ORTHO05D009149 1.9e-41 173.3 206 45.1
arahy.Tifrunner.gnm1.ann1.HX298U Arachis hypogaea HOM05D007260 ORTHO05D009149 2.5e-41 172.9 201 49.3
Sp4g23850 Schrenkiella parvula HOM05D007260 ORTHO05D009149 2.5e-41 172.9 207 45.9
arahy.Tifrunner.gnm1.ann1.QMP5TS Arachis hypogaea HOM05D007260 ORTHO05D009149 3.2e-41 172.6 200 49.0
Nitab4.5_0006870g0020 Nicotiana tabacum HOM05D007260 ORTHO05D009149 3.2e-41 172.6 215 46.5
VMungo1309G2091 Vigna mungo HOM05D007260 ORTHO05D009149 3.2e-41 172.6 196 51.5
CARHR136700 Cardamine hirsuta HOM05D007260 ORTHO05D009149 4.2e-41 172.2 210 46.7
Manes.09G018400 Manihot esculenta HOM05D007260 ORTHO05D009149 7.2e-41 171.4 214 48.6
Aqoxy1G00296 Aquilegia oxysepala HOM05D007260 ORTHO05D009149 1.6e-40 170.2 210 43.8
BcaB06g29191 Brassica carinata HOM05D007260 ORTHO05D009149 2.1e-40 169.9 207 45.4
Glyma.03G134300 Glycine max HOM05D007260 ORTHO05D009149 2.7e-40 169.5 186 50.0
TPR.G18237 Trifolium pratense HOM05D007260 ORTHO05D009149 2.7e-40 169.5 191 51.8
AL4G39670 Arabidopsis lyrata HOM05D007260 ORTHO05D009149 3.6e-40 169.1 212 43.4
PGSC0003DMG401012695 Solanum tuberosum HOM05D007260 ORTHO05D009149 3.6e-40 169.1 215 44.7
MBI13_g10219_MAGBIO Magnolia biondii HOM05D007260 ORTHO05D009149 8.8e-39 164.5 167 54.5
DCAR_020507 Daucus carota HOM05D007260 ORTHO05D009149 2.0e-38 163.3 173 50.9
BraA04t18628Z Brassica rapa HOM05D007260 ORTHO05D009149 1.3e-37 160.6 207 44.9
A04p31710 Brassica napus HOM05D007260 ORTHO05D009149 1.7e-37 160.2 207 44.4
C04p69130 Brassica napus HOM05D007260 ORTHO05D009149 1.7e-37 160.2 208 45.2
BcaC02g07303 Brassica carinata HOM05D007260 ORTHO05D009149 4.8e-37 158.7 208 44.7
BolC4t28410H Brassica oleracea HOM05D007260 ORTHO05D009149 4.8e-37 158.7 208 44.7
Glyma.19G136500 Glycine max HOM05D007260 ORTHO05D009149 8.3e-37 157.9 187 47.6
Sopen04g008360 Solanum pennellii HOM05D007260 ORTHO05D009149 1.1e-36 157.5 206 43.2
CAN.G676.12 Capsicum annuum HOM05D007260 ORTHO05D009149 1.4e-36 157.1 214 41.6
MBI13_g36811_MAGBIO Magnolia biondii HOM05D007260 ORTHO05D009149 1.4e-36 157.1 210 45.7
Actinidia39206 Actinidia chinensis HOM05D007260 ORTHO05D009149 7.0e-36 154.8 155 55.5
HanXRQChr13g0396001 Helianthus annuus HOM05D007260 ORTHO05D009149 6.5e-34 148.3 167 45.5
PSO782G2785 Papaver somniferum HOM05D007260 ORTHO05D009149 1.1e-33 147.5 214 43.0
Haze_19813 Corylus avellana HOM05D007260 ORTHO05D009149 8.0e-32 141.4 155 51.6
Haze_19810 Corylus avellana HOM05D007260 ORTHO05D009149 2.0e-30 136.7 144 52.8
MELO3C013619.2 Cucumis melo HOM05D007260 ORTHO05D009149 5.7e-30 135.2 140 49.3
unitig_8.g3500 Utricularia gibba HOM05D000800 ORTHO05D000658 4.1e-28 129.0 191 39.8
MBI13_g37004_MAGBIO Magnolia biondii HOM05D007260 ORTHO05D009149 2.7e-27 126.3 190 43.7
Peaxi162Scf00130g00720 Petunia axillaris HOM05D007260 ORTHO05D009149 2.9e-26 122.9 124 51.6
PSO063G4612 Papaver somniferum HOM05D007260 ORTHO05D009149 3.6e-24 115.9 271 32.5
Solyc04g016250.3 Solanum lycopersicum HOM05D007260 ORTHO05D009149 6.1e-24 115.2 179 39.7
CDE04G0457 Ceratophyllum demersum HOM05D007260 ORTHO05D009149 1.0e-23 114.4 197 36.0
Hma1.2p1_0110F.1_g052790 Hydrangea macrophylla HOM05D007260 ORTHO05D009149 1.4e-23 114.0 117 54.7
Zm00001eb405200 Zea mays HOM05D007260 ORTHO05D009149 3.0e-23 112.8 192 38.0
Dinv02794 Davidia involucrata HOM05D007260 ORTHO05D009149 2.0e-22 110.2 100 56.0
Lj1P1128T41 Lonicera japonica HOM05D007260 ORTHO05D009149 2.6e-22 109.8 118 50.8
CSS0011677 Camellia sinensis var. sinensis HOM05D007260 ORTHO05D009149 2.9e-21 106.3 112 50.0
Os11g0140100 Oryza sativa ssp. japonica HOM05D007260 ORTHO05D009149 7.8e-19 98.2 200 34.5
ATR0188G026 Amborella trichopoda HOM05D007260 ORTHO05D009149 1.6e-16 90.5 158 39.2
SEGI_00639 Sequoiadendron giganteum HOM05D007260 ORTHO05D009149 1.5e-14 84.0 139 38.8
SEGI_24189 Sequoiadendron giganteum HOM05D007260 ORTHO05D009149 1.5e-14 84.0 139 38.8
SEGI_29096 Sequoiadendron giganteum HOM05D007260 ORTHO05D009149 1.5e-14 84.0 139 38.8
QL02p019823 Quercus lobata HOM05D001009 ORTHO05D000829 1.1e-07 61.2 188 28.2
EL10Ac9g22225 Beta vulgaris HOM05D001009 ORTHO05D000829 3.1e-07 59.7 208 25.5
GSVIVG01035906001 Vitis vinifera HOM05D001009 ORTHO05D000829 4.0e-07 59.3 191 24.6
Hund19599 Selenicereus undatus HOM05D001009 ORTHO05D000829 6.8e-07 58.5 193 25.9
Pp3c12_23320 Physcomitrium patens HOM05D001009 ORTHO05D000829 1.5e-06 57.4 211 26.5
Sc06g0007180 Simmondsia chinensis HOM05D001009 ORTHO05D000829 2.0e-06 57.0 215 23.7
EL10Ac2g04138 Beta vulgaris HOM05D001009 ORTHO05D000829 2.6e-06 56.6 193 24.4
CiPaw.07G228200 Carya illinoinensis HOM05D001009 ORTHO05D000829 3.4e-06 56.2 193 23.3
Migut.I00712 Erythranthe guttata HOM05D001009 ORTHO05D000829 3.4e-06 56.2 196 21.4
Thecc.09G018000 Theobroma cacao HOM05D001009 ORTHO05D000829 4.4e-06 55.8 193 24.4
unitig_0.g1108 Utricularia gibba HOM05D001009 ORTHO05D000829 4.4e-06 55.8 197 22.3


User provided reference genes

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