Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 5.5e-124 447.6 218 100.0
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 8.0e-99 364.0 218 81.2
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 2.3e-98 362.5 219 81.3
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 6.8e-98 360.9 218 80.7
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 1.2e-97 360.1 217 76.5
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 7.5e-97 357.5 217 76.0
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 9.8e-97 357.1 217 80.6
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 1.3e-96 356.7 218 79.4
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 2.2e-96 355.9 218 78.9
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 2.2e-96 355.9 214 81.8
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 3.7e-96 355.1 222 78.8
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 6.4e-96 354.4 216 79.2
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 6.4e-96 354.4 216 79.2
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 8.3e-96 354.0 218 79.4
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 8.3e-96 354.0 216 78.7
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 1.1e-95 353.6 217 79.3
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 1.1e-95 353.6 218 78.9
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 1.4e-95 353.2 218 80.3
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 1.9e-95 352.8 216 78.2
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 1.9e-95 352.8 216 80.1
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 1.9e-95 352.8 214 79.0
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 3.2e-95 352.1 218 78.9
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 3.2e-95 352.1 215 79.1
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 3.2e-95 352.1 218 78.4
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 4.1e-95 351.7 218 79.4
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 4.1e-95 351.7 222 79.3
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 7.0e-95 350.9 215 78.6
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 7.0e-95 350.9 215 78.6
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 7.0e-95 350.9 216 78.7
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 9.2e-95 350.5 215 78.1
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 1.2e-94 350.1 215 78.1
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 1.2e-94 350.1 217 77.4
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 1.2e-94 350.1 219 78.1
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 1.6e-94 349.7 216 77.3
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 1.6e-94 349.7 216 79.2
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 1.6e-94 349.7 218 78.9
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 2.0e-94 349.4 218 77.5
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 2.0e-94 349.4 217 77.9
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 2.7e-94 349.0 215 78.1
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 2.7e-94 349.0 215 78.1
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 2.7e-94 349.0 218 76.6
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 3.5e-94 348.6 221 76.9
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 3.5e-94 348.6 218 78.0
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 4.6e-94 348.2 218 78.0
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 6.0e-94 347.8 213 78.4
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 6.0e-94 347.8 214 78.5
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 6.0e-94 347.8 218 76.6
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 6.0e-94 347.8 218 78.4
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 6.0e-94 347.8 219 78.5
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 7.8e-94 347.4 217 77.4
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 1.0e-93 347.1 216 76.9
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 1.0e-93 347.1 215 78.6
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.7e-93 346.3 218 77.1
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 1.7e-93 346.3 216 78.7
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 3.0e-93 345.5 216 78.2
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 3.0e-93 345.5 216 77.8
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 5.0e-93 344.7 218 78.4
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 6.6e-93 344.4 216 76.9
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 6.6e-93 344.4 214 77.1
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 8.6e-93 344.0 219 75.8
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 8.6e-93 344.0 218 77.5
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 1.1e-92 343.6 215 78.1
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 1.1e-92 343.6 218 78.0
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 1.5e-92 343.2 218 77.5
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.5e-92 343.2 213 77.9
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 1.9e-92 342.8 215 79.1
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 1.9e-92 342.8 218 77.1
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 1.9e-92 342.8 218 76.1
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 3.3e-92 342.0 233 73.8
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 4.3e-92 341.7 216 75.5
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 5.6e-92 341.3 214 77.6
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 7.3e-92 340.9 218 76.6
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 9.5e-92 340.5 218 76.6
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 4.7e-91 338.2 218 76.1
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 6.2e-91 337.8 218 77.1
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 1.1e-90 337.0 220 75.5
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 1.4e-90 336.7 215 77.7
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 8.9e-90 334.0 216 76.9
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 8.9e-90 334.0 216 76.9
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 3.4e-89 332.0 214 74.8
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 1.7e-88 329.7 215 75.3
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.9e-87 326.2 195 76.9
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 2.4e-87 325.9 216 73.1
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 2.1e-86 322.8 203 77.8
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 7.8e-86 320.9 218 75.2
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 1.7e-85 319.7 220 72.7
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 1.1e-84 317.0 219 70.3
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 1.5e-84 316.6 214 73.8
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 7.3e-84 314.3 211 70.6
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 4.7e-83 311.6 216 69.0
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 1.1e-82 310.5 216 70.4
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 1.8e-82 309.7 215 72.6
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 1.2e-81 307.0 202 75.7
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 8.4e-80 300.8 193 75.6
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 7.1e-79 297.7 217 68.7
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.5e-76 290.0 189 70.9
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 2.5e-76 289.3 188 75.0
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 2.5e-76 289.3 219 66.2
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 4.4e-73 278.5 204 68.6
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 2.2e-72 276.2 183 70.5
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 2.2e-72 276.2 190 68.4
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 1.5e-68 263.5 190 68.4
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 1.8e-66 256.5 145 84.8
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 4.0e-66 255.4 190 64.7
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 1.5e-65 253.4 152 77.6
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 4.9e-64 248.4 150 78.7
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.4e-63 246.1 264 53.0
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 5.4e-63 245.0 147 79.6
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 1.6e-59 233.4 147 75.5
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 2.1e-59 233.0 180 58.9
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 1.4e-50 203.8 190 50.5
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 9.6e-44 181.0 104 83.7
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 2.2e-40 169.9 208 46.6
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 6.9e-26 121.7 79 70.9
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 1.2e-25 120.9 66 83.3
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 2.6e-25 119.8 99 61.6
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 2.6e-25 119.8 86 67.4
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 4.2e-23 112.5 87 58.6
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 8.8e-21 104.8 66 74.2
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 2.1e-14 83.6 66 62.1
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 1.1e-10 71.2 146 34.9
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 1.5e-07 60.8 41 61.0


User provided reference genes

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