Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc25g0003740 Simmondsia chinensis HOM05D009609 ORTHO05D011572 2.0e-101 372.5 191 100.0
Sc21g0002860 Simmondsia chinensis HOM05D009609 ORTHO05D011572 4.5e-69 265.0 173 83.2
Sc02g0007440 Simmondsia chinensis HOM05D009609 ORTHO05D011572 4.9e-52 208.4 137 80.3
Sc01g0005370 Simmondsia chinensis HOM05D009609 ORTHO05D011572 3.1e-38 162.5 98 88.8
Sc17g0003390 Simmondsia chinensis HOM05D009609 ORTHO05D011572 5.9e-37 158.3 98 87.8
Sc25g0001390 Simmondsia chinensis HOM05D009609 ORTHO05D011572 2.2e-36 156.4 146 65.1
Sc26g0002750 Simmondsia chinensis HOM05D009609 ORTHO05D011572 7.7e-29 131.3 85 82.4
Hund08112 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.3e-28 130.6 169 44.4
Hund01689 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.9e-27 126.7 172 43.6
Hund18060 Selenicereus undatus HOM05D009609 ORTHO05D011572 2.5e-27 126.3 172 43.0
Sc08g0007390 Simmondsia chinensis HOM05D009609 ORTHO05D011572 2.7e-26 122.9 73 84.9
ECA248G1144 Erigeron canadensis HOM05D009609 ORTHO05D011572 7.9e-26 121.3 140 48.6
Hund15195 Selenicereus undatus HOM05D009609 ORTHO05D011572 2.3e-25 119.8 138 49.3
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 8.0e-18 94.7 144 40.3
Hund03874 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.8e-17 93.6 148 39.9
Hund28780 Selenicereus undatus HOM05D009609 ORTHO05D011572 3.0e-17 92.8 148 39.9
Hund28782 Selenicereus undatus HOM05D009609 ORTHO05D011572 3.0e-17 92.8 148 39.9
Hund14849 Selenicereus undatus HOM05D009900 ORTHO05D011543 4.0e-17 92.4 194 36.6
Hund17497 Selenicereus undatus HOM05D009609 ORTHO05D011572 2.0e-16 90.1 117 45.3
Hund04460 Selenicereus undatus HOM05D009609 ORTHO05D011572 2.6e-16 89.7 148 38.5
Hund06375 Selenicereus undatus HOM05D001385 ORTHO05D004434 4.4e-16 89.0 139 40.3
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 5.7e-16 88.6 159 40.3
Hund04270 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.3e-15 87.4 100 49.0
Hund10330 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.7e-15 87.0 107 45.8
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 2.2e-15 86.7 147 38.1
COL.COLO4_33862 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.4e-14 84.0 139 34.5
Hund26514 Selenicereus undatus HOM05D009900 ORTHO05D011543 1.4e-14 84.0 136 42.6
EL10Ac1g02060 Beta vulgaris HOM05D001385 ORTHO05D008760 2.2e-12 76.6 158 34.8
Sc03g0005390 Simmondsia chinensis HOM05D055210 ORTHO05D011572 1.1e-11 74.3 94 52.1
MD02G1315300 Malus domestica HOM05D008315 ORTHO05D009452 4.7e-10 68.9 182 27.5
Hund14858 Selenicereus undatus HOM05D009900 ORTHO05D011543 6.1e-10 68.6 123 40.7
Hund20142 Selenicereus undatus HOM05D001385 ORTHO05D008760 8.0e-10 68.2 151 31.8
Hund04136 Selenicereus undatus HOM05D009900 ORTHO05D011543 1.0e-09 67.8 100 43.0
Hund24775 Selenicereus undatus HOM05D009900 ORTHO05D011543 1.0e-09 67.8 100 43.0
Hund02732 Selenicereus undatus HOM05D009900 ORTHO05D011543 2.3e-09 66.6 147 36.1
Hund19989 Selenicereus undatus HOM05D041637 ORTHO05D030589 2.3e-09 66.6 162 29.6
Hund17813 Selenicereus undatus HOM05D009900 ORTHO05D011543 4.0e-09 65.9 113 38.9
Hund20455 Selenicereus undatus HOM05D009609 ORTHO05D011572 4.0e-09 65.9 142 33.1
Hund15000 Selenicereus undatus HOM05D009609 ORTHO05D011572 5.2e-09 65.5 123 35.8
EL10Ac6g14499 Beta vulgaris HOM05D001385 ORTHO05D008760 1.5e-08 63.9 135 31.1
Ah.14g084400 Amaranthus hybridus HOM05D009900 ORTHO05D011543 2.0e-08 63.5 127 32.3
EL10Ac9g20910 Beta vulgaris HOM05D001385 ORTHO05D008760 2.6e-08 63.2 135 31.1
Hund12772 Selenicereus undatus HOM05D009900 ORTHO05D011543 3.4e-08 62.8 107 40.2
Hund22136 Selenicereus undatus HOM05D001385 ORTHO05D004434 5.7e-08 62.0 114 34.2
Hund14851 Selenicereus undatus HOM05D009900 ORTHO05D011543 9.8e-08 61.2 107 39.3
EL10Ac7g16607 Beta vulgaris HOM05D001385 ORTHO05D008760 1.7e-07 60.5 132 30.3
arahy.Tifrunner.gnm1.ann1.LQJ2G8 Arachis hypogaea HOM05D010482 ORTHO05D000385 2.2e-07 60.1 163 28.2
EL10Ac7g18151 Beta vulgaris HOM05D001385 ORTHO05D008760 2.8e-07 59.7 147 29.3
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.8e-07 59.7 126 29.4
Hund14635 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.8e-07 59.7 133 33.1
Hund20056 Selenicereus undatus HOM05D009900 ORTHO05D011543 2.8e-07 59.7 107 38.3
COL.COLO4_29219 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.7e-07 59.3 125 30.4
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.7e-07 59.3 199 26.1
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.7e-07 59.3 199 26.1
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 4.8e-07 58.9 199 26.1
Hund20374 Selenicereus undatus HOM05D009900 ORTHO05D011543 6.3e-07 58.5 94 41.5
EL10Ac1g02023 Beta vulgaris HOM05D001385 ORTHO05D008760 8.3e-07 58.2 139 28.8
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 8.3e-07 58.2 90 37.8
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 1.1e-06 57.8 194 25.8
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 1.1e-06 57.8 149 25.5
Hund13048 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.1e-06 57.8 159 28.3
Hund15061 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.1e-06 57.8 125 32.0
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.4e-06 57.4 139 32.4
Sc11g0002590 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.4e-06 57.4 107 36.4
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.8e-06 57.0 90 36.7
arahy.Tifrunner.gnm1.ann1.465ER6 Arachis hypogaea HOM05D010482 ORTHO05D000385 2.4e-06 56.6 162 25.9
Hund13844 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.4e-06 56.6 125 31.2
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.4e-06 56.6 141 28.4
CANSAT35G0020 Cannabis sativa HOM05D001309 ORTHO05D000385 3.1e-06 56.2 171 25.7
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.1e-06 56.2 197 24.9
Hund11364 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.1e-06 56.2 117 33.3
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.1e-06 56.2 140 28.6
COL.COLO4_21802 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.1e-06 55.8 87 34.5
ECA236G1122 Erigeron canadensis HOM05D009609 ORTHO05D011572 4.1e-06 55.8 152 28.9
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 4.1e-06 55.8 177 27.1
Hund04034 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.1e-06 55.8 125 31.2
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 5.4e-06 55.5 146 26.7
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 7.0e-06 55.1 179 24.0
Hund01655 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.0e-06 55.1 125 30.4
Hund23113 Selenicereus undatus HOM05D009609 ORTHO05D011572 7.0e-06 55.1 57 54.4
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.0e-06 55.1 142 27.5
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 9.1e-06 54.7 136 32.4


User provided reference genes

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