Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc25g0003360 Simmondsia chinensis HOM05D004392 ORTHO05D004846 9.9e-59 229.9 119 100.0
Sc01g0002200 Simmondsia chinensis HOM05D004392 ORTHO05D004846 6.5e-10 67.8 38 89.5
Atru.chr5.766 Acer truncatum HOM05D004392 ORTHO05D004846 2.1e-08 62.8 81 50.6
Ciclev10018449m.g Citrus clementina HOM05D004392 ORTHO05D004846 4.7e-08 61.6 77 51.9
GSVIVG01027438001 Vitis vinifera HOM05D004392 ORTHO05D004846 4.7e-08 61.6 72 52.8
Gohir.A12G116600 Gossypium hirsutum HOM05D004392 ORTHO05D004846 6.1e-08 61.2 76 52.6
Gohir.D12G120100 Gossypium hirsutum HOM05D004392 ORTHO05D004846 6.1e-08 61.2 76 52.6
Gorai.008G130800 Gossypium raimondii HOM05D004392 ORTHO05D004846 6.1e-08 61.2 76 52.6
Manes.01G240000 Manihot esculenta HOM05D004392 ORTHO05D004846 1.0e-07 60.5 54 63.0
Cpa.g.sc193.6 Carica papaya HOM05D004392 ORTHO05D004846 1.8e-07 59.7 39 76.9
AUR62022676 Chenopodium quinoa HOM05D004392 ORTHO05D004846 2.3e-07 59.3 39 79.5
Ah.05g178970 Amaranthus hybridus HOM05D004392 ORTHO05D004846 3.0e-07 58.9 64 56.2
Duzib138G1478 Durio zibethinus HOM05D004392 ORTHO05D004846 3.0e-07 58.9 36 83.3
TAR636G2848 Trochodendron aralioides HOM05D004392 ORTHO05D004846 3.0e-07 58.9 83 49.4
AUR62004560 Chenopodium quinoa HOM05D004392 ORTHO05D004846 5.1e-07 58.2 39 76.9
BcaC04g24098 Brassica carinata HOM05D004392 ORTHO05D004846 8.8e-07 57.4 82 45.1
C09p01080 Brassica napus HOM05D004392 ORTHO05D004846 8.8e-07 57.4 82 45.1
BolC9t53041H Brassica oleracea HOM05D004392 ORTHO05D004846 8.8e-07 57.4 82 45.1
CiPaw.01G082300 Carya illinoinensis HOM05D004392 ORTHO05D004846 8.8e-07 57.4 61 57.4
Thecc.01G333400 Theobroma cacao HOM05D004392 ORTHO05D004846 8.8e-07 57.4 62 58.1
BraA09t35770Z Brassica rapa HOM05D004392 ORTHO05D004846 1.1e-06 57.0 92 40.2
Cfa003736 Carpinus fangiana HOM05D004392 ORTHO05D004846 1.1e-06 57.0 54 63.0
COL.COLO4_23048 Corchorus olitorius HOM05D004392 ORTHO05D004846 1.1e-06 57.0 36 80.6
Haze_15733 Corylus avellana HOM05D004392 ORTHO05D004846 1.5e-06 56.6 39 74.4
FvH4_7g17640 Fragaria vesca HOM05D004392 ORTHO05D004846 1.5e-06 56.6 51 62.7
FAN03G2506 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.5e-06 56.6 51 62.7
FAN06G0139 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.5e-06 56.6 51 62.7
FAN06G0296 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.5e-06 56.6 51 62.7
Lj3g0000602 Lotus japonicus HOM05D004392 ORTHO05D004846 1.5e-06 56.6 64 54.7
TWI59G0442 Tripterygium wilfordii HOM05D004392 ORTHO05D004846 1.5e-06 56.6 63 58.7
Thhalv10028358m.g Eutrema salsugineum HOM05D004392 ORTHO05D004846 2.0e-06 56.2 84 45.2
Aa31LG5G1150 Aethionema arabicum HOM05D004392 ORTHO05D004846 2.6e-06 55.8 70 50.0
A09p00990 Brassica napus HOM05D004392 ORTHO05D004846 2.6e-06 55.8 103 38.8
MBI12_g11801_MAGBIO Magnolia biondii HOM05D004392 ORTHO05D004846 2.6e-06 55.8 39 74.4
Prupe.2G197500 Prunus persica HOM05D004392 ORTHO05D004846 2.6e-06 55.8 51 62.7
Medtr8g024320 Medicago truncatula HOM05D004392 ORTHO05D004846 3.3e-06 55.5 61 54.1
BcaB01g02314 Brassica carinata HOM05D004392 ORTHO05D004846 4.4e-06 55.1 44 68.2
Potri.014G105601 Populus trichocarpa HOM05D004392 ORTHO05D004846 4.4e-06 55.1 62 54.8
QL08p047226 Quercus lobata HOM05D004392 ORTHO05D004846 4.4e-06 55.1 55 60.0
Sabra14G0077700 Salix brachista HOM05D004392 ORTHO05D004846 4.4e-06 55.1 62 54.8
FAN01G0919 Fragaria x ananassa HOM05D004392 ORTHO05D004846 5.7e-06 54.7 51 60.8
FAN10G1489 Fragaria x ananassa HOM05D004392 ORTHO05D004846 5.7e-06 54.7 51 60.8
FAN10G3859 Fragaria x ananassa HOM05D004392 ORTHO05D004846 5.7e-06 54.7 51 60.8
BcaB01g02315 Brassica carinata HOM05D004392 ORTHO05D004846 7.4e-06 54.3 54 57.4
Eucgr.D02650 Eucalyptus grandis HOM05D004392 ORTHO05D004846 7.4e-06 54.3 88 39.8
QL10p065016 Quercus lobata HOM05D004392 ORTHO05D004846 7.4e-06 54.3 32 84.4
SHI29621 Sapria himalayana HOM05D004392 ORTHO05D004846 7.4e-06 54.3 54 55.6
EL10Ac1g00187 Beta vulgaris HOM05D004392 ORTHO05D004846 9.7e-06 53.9 39 76.9
Cc02_g39950 Coffea canephora HOM05D004392 ORTHO05D004846 9.7e-06 53.9 66 50.0
Sp6g01320 Schrenkiella parvula HOM05D004392 ORTHO05D004846 9.7e-06 53.9 54 57.4
Hund27149 Selenicereus undatus HOM05D004392 ORTHO05D004846 9.7e-06 53.9 39 74.4


User provided reference genes

Program Settings