Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc25g0003020 Simmondsia chinensis HOM05D000334 ORTHO05D000200 4.0e-56 221.1 104 100.0
Sc05g0007660 Simmondsia chinensis HOM05D000334 ORTHO05D000200 6.3e-09 64.3 40 72.5
MD06G1071700 Malus domestica HOM05D000334 ORTHO05D000200 6.9e-08 60.8 39 64.1
COL.COLO4_31460 Corchorus olitorius HOM05D000334 ORTHO05D000200 2.0e-07 59.3 45 57.8
Duzib192G0074 Durio zibethinus HOM05D000334 ORTHO05D000200 2.6e-07 58.9 41 65.9
AUR62014826 Chenopodium quinoa HOM05D000334 ORTHO05D000200 3.4e-07 58.5 36 75.0
Gohir.A10G026300 Gossypium hirsutum HOM05D000334 ORTHO05D000200 4.5e-07 58.2 41 63.4
Gohir.D10G026900 Gossypium hirsutum HOM05D000334 ORTHO05D000200 4.5e-07 58.2 41 63.4
Thecc.06G186300 Theobroma cacao HOM05D000334 ORTHO05D000200 4.5e-07 58.2 45 57.8
Actinidia07585 Actinidia chinensis HOM05D000334 ORTHO05D000200 5.9e-07 57.8 39 64.1
Actinidia26126 Actinidia chinensis HOM05D000334 ORTHO05D000200 5.9e-07 57.8 39 64.1
Glyma.13G238500 Glycine max HOM05D000334 ORTHO05D000200 5.9e-07 57.8 37 67.6
AUR62017021 Chenopodium quinoa HOM05D000334 ORTHO05D000200 1.0e-06 57.0 36 72.2
Ciclev10015955m.g Citrus clementina HOM05D000334 ORTHO05D000200 1.0e-06 57.0 42 59.5
Gorai.011G028200 Gossypium raimondii HOM05D000334 ORTHO05D000200 1.0e-06 57.0 41 61.0
GSVIVG01005210001 Vitis vinifera HOM05D000334 ORTHO05D000200 1.3e-06 56.6 38 65.8
Atru.chr10.1867 Acer truncatum HOM05D000334 ORTHO05D000200 1.7e-06 56.2 39 64.1
Ca_00340_v3 Cicer arietinum L. HOM05D000334 ORTHO05D000200 1.7e-06 56.2 39 61.5
Sabra11G0037100 Salix brachista HOM05D000334 ORTHO05D000200 1.7e-06 56.2 42 64.3
TPR.G16518 Trifolium pratense HOM05D000334 ORTHO05D000200 1.7e-06 56.2 37 64.9
Duzib160G0468 Durio zibethinus HOM05D000334 ORTHO05D000200 2.2e-06 55.8 41 61.0
Phvul.006G184800 Phaseolus vulgaris HOM05D000334 ORTHO05D000200 2.2e-06 55.8 37 62.2
TWI38G2396 Tripterygium wilfordii HOM05D000334 ORTHO05D000200 2.2e-06 55.8 38 63.2
VMungo0540G0937 Vigna mungo HOM05D000334 ORTHO05D000200 2.2e-06 55.8 37 64.9
MBI06_g04244_MAGBIO Magnolia biondii HOM05D000334 ORTHO05D000200 2.9e-06 55.5 44 54.5
MBI06_g43064_MAGBIO Magnolia biondii HOM05D000334 ORTHO05D000200 2.9e-06 55.5 44 54.5
Potri.011G053300 Populus trichocarpa HOM05D000334 ORTHO05D000200 2.9e-06 55.5 42 64.3
Hma1.2p1_0208F.1_g088150 Hydrangea macrophylla HOM05D000334 ORTHO05D000200 3.8e-06 55.1 39 61.5
Medtr2g013780 Medicago truncatula HOM05D000334 ORTHO05D000200 3.8e-06 55.1 37 62.2
Aqoxy1G02402 Aquilegia oxysepala HOM05D000334 ORTHO05D000200 5.0e-06 54.7 38 57.9
Aqoxy4G00773 Aquilegia oxysepala HOM05D000334 ORTHO05D000200 5.0e-06 54.7 39 61.5
CSS0029087 Camellia sinensis var. sinensis HOM05D000334 ORTHO05D000200 5.0e-06 54.7 39 56.4
MELO3C002607.2 Cucumis melo HOM05D000334 ORTHO05D000200 5.0e-06 54.7 36 61.1
Lj6g0005325 Lotus japonicus HOM05D000334 ORTHO05D000200 5.0e-06 54.7 37 62.2
Lalb_Chr20g0121851 Lupinus albus HOM05D000334 ORTHO05D000200 5.0e-06 54.7 37 64.9
Nn1g06521 Nelumbo nucifera HOM05D000334 ORTHO05D000200 5.0e-06 54.7 39 64.1
Potri.004G044300 Populus trichocarpa HOM05D000334 ORTHO05D000200 5.0e-06 54.7 39 64.1
arahy.Tifrunner.gnm1.ann1.A6JRIG Arachis hypogaea HOM05D000334 ORTHO05D000200 6.5e-06 54.3 37 64.9
arahy.Tifrunner.gnm1.ann1.GMB1MS Arachis hypogaea HOM05D000334 ORTHO05D000200 6.5e-06 54.3 37 64.9
Manes.16G028500 Manihot esculenta HOM05D000334 ORTHO05D000200 6.5e-06 54.3 38 60.5
Atru.chr6.2983 Acer truncatum HOM05D000334 ORTHO05D000200 8.5e-06 53.9 39 61.5
MD05G1338400 Malus domestica HOM05D000334 ORTHO05D000200 8.5e-06 53.9 39 61.5
Nn1g04108 Nelumbo nucifera HOM05D000334 ORTHO05D000200 8.5e-06 53.9 38 63.2


User provided reference genes

Program Settings