Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc25g0002820 Simmondsia chinensis HOM05D007215 ORTHO05D009019 2.3e-114 415.6 212 100.0
EL10Ac3g06096 Beta vulgaris HOM05D007215 ORTHO05D009019 5.3e-71 271.6 197 71.6
QL10p055936 Quercus lobata HOM05D007215 ORTHO05D009019 6.7e-58 228.0 192 66.7
Glyma.02G137900 Glycine max HOM05D007215 ORTHO05D009019 3.3e-57 225.7 199 64.8
Glyma.07G207400 Glycine max HOM05D007215 ORTHO05D009019 3.3e-57 225.7 195 63.6
VMungo0251G1340 Vigna mungo HOM05D007215 ORTHO05D009019 2.8e-56 222.6 195 64.1
Gohir.A10G144100 Gossypium hirsutum HOM05D007215 ORTHO05D009019 1.1e-55 220.7 210 59.5
Phvul.003G297000 Phaseolus vulgaris HOM05D007215 ORTHO05D009019 1.4e-55 220.3 193 64.2
MSTRG.9732 Avicennia marina HOM05D007215 ORTHO05D009019 1.8e-55 219.9 195 62.1
Gorai.011G135400 Gossypium raimondii HOM05D007215 ORTHO05D009019 2.4e-55 219.5 210 59.5
Ah.07g202820 Amaranthus hybridus HOM05D007215 ORTHO05D009019 3.1e-55 219.2 179 67.0
Lalb_Chr05g0218881 Lupinus albus HOM05D007215 ORTHO05D009019 1.2e-54 217.2 192 63.5
Cfa015271 Carpinus fangiana HOM05D007215 ORTHO05D009019 1.5e-54 216.9 192 63.5
Lalb_Chr09g0328091 Lupinus albus HOM05D007215 ORTHO05D009019 1.5e-54 216.9 192 62.5
Psat7g121080 Pisum sativum HOM05D007215 ORTHO05D009019 5.9e-54 214.9 197 61.9
FAN17G2642 Fragaria x ananassa HOM05D007215 ORTHO05D009019 1.0e-53 214.2 206 62.6
RcHm_v2.0_Chr4g0405921 Rosa chinensis HOM05D007215 ORTHO05D009019 1.0e-53 214.2 193 65.3
Potri.019G112300 Populus trichocarpa HOM05D007215 ORTHO05D009019 1.3e-53 213.8 211 61.1
AUR62023787 Chenopodium quinoa HOM05D007215 ORTHO05D009019 2.9e-53 212.6 176 65.3
Cc03_g14170 Coffea canephora HOM05D007215 ORTHO05D009019 2.9e-53 212.6 195 61.0
Medtr4g087380 Medicago truncatula HOM05D007215 ORTHO05D009019 8.5e-53 211.1 197 61.4
Dinv33208 Davidia involucrata HOM05D007215 ORTHO05D009019 2.5e-52 209.5 191 60.7
DCAR_027521 Daucus carota HOM05D007215 ORTHO05D009019 3.2e-52 209.1 175 62.3
FvH4_4g10370 Fragaria vesca HOM05D007215 ORTHO05D009019 1.2e-51 207.2 206 61.2
TPR.G23547 Trifolium pratense HOM05D002328 ORTHO05D009019 1.2e-51 207.2 197 60.4
AUR62002398 Chenopodium quinoa HOM05D007215 ORTHO05D009019 2.1e-51 206.5 176 63.6
ClCG06G001110 Citrullus lanatus HOM05D007215 ORTHO05D009019 6.1e-51 204.9 202 59.9
Prupe.1G207500 Prunus persica HOM05D007215 ORTHO05D009019 6.1e-51 204.9 218 55.5
Sed0003072 Sechium edule HOM05D007215 ORTHO05D009019 6.1e-51 204.9 202 59.4
Peaxi162Scf00483g00061 Petunia axillaris HOM05D007215 ORTHO05D009019 1.8e-50 203.4 185 61.1
Lj6P222T10 Lonicera japonica HOM05D007215 ORTHO05D009019 1.1e-49 200.7 170 59.4
Atru.chr4.1429 Acer truncatum HOM05D007215 ORTHO05D009019 1.5e-49 200.3 206 59.2
CSS0011584 Camellia sinensis var. sinensis HOM05D007215 ORTHO05D009019 2.0e-49 199.9 171 67.8
MSTRG.4303 Avicennia marina HOM05D007215 ORTHO05D009019 3.3e-49 199.1 193 59.1
Hma1.2p1_0150F.1_g066880 Hydrangea macrophylla HOM05D007215 ORTHO05D009019 1.3e-48 197.2 155 71.0
Manes.11G128800 Manihot esculenta HOM05D007215 ORTHO05D009019 2.8e-48 196.1 178 62.9
Haze_01356 Corylus avellana HOM05D007215 ORTHO05D009019 3.7e-48 195.7 143 72.7
MD04G1049300 Malus domestica HOM05D007215 ORTHO05D009019 4.8e-48 195.3 249 51.4
Sabra19G0108300 Salix brachista HOM05D007215 ORTHO05D009019 6.3e-48 194.9 203 57.6
Lju470C16T0 Lonicera japonica HOM05D007215 ORTHO05D009019 1.1e-47 194.1 175 61.7
Peaxi162Scf00180g00003 Petunia axillaris HOM05D007215 ORTHO05D009019 3.1e-47 192.6 175 58.9
FAN22G1962 Fragaria x ananassa HOM05D007215 ORTHO05D009019 6.9e-47 191.4 188 62.8
Oeu016616.1 Olea europaea HOM05D007215 ORTHO05D009019 1.2e-46 190.7 184 58.2
Oeu016617.1 Olea europaea HOM05D007215 ORTHO05D009019 1.2e-46 190.7 184 58.2
Duzib268G1282 Durio zibethinus HOM05D007215 ORTHO05D009019 2.2e-45 186.4 209 53.1
SGA_v2.0_scaffold12G06193 Striga asiatica HOM05D007215 ORTHO05D009019 2.9e-45 186.0 183 60.7
Oeu015716.1 Olea europaea HOM05D007215 ORTHO05D009019 6.5e-45 184.9 175 57.7
Migut.G01175 Erythranthe guttata HOM05D007215 ORTHO05D009019 2.5e-44 183.0 200 54.0
Cpa.g.sc9.370 Carica papaya HOM05D007215 ORTHO05D009019 5.5e-44 181.8 151 69.5
TAR362G0943 Trochodendron aralioides HOM05D007215 ORTHO05D009019 9.4e-44 181.0 188 56.4
CiPaw.01G170200 Carya illinoinensis HOM05D007215 ORTHO05D009019 6.1e-43 178.3 216 52.8
CiPaw.02G100200 Carya illinoinensis HOM05D007215 ORTHO05D009019 7.9e-43 177.9 199 60.8
THA.LOC104804037 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 1.8e-42 176.8 197 54.8
HanXRQChr04g0110541 Helianthus annuus HOM05D007215 ORTHO05D009019 3.3e-41 172.6 193 53.4
C08p34680 Brassica napus HOM05D007215 ORTHO05D009019 7.4e-41 171.4 196 54.1
Thecc.04G165300 Theobroma cacao HOM05D007215 ORTHO05D009019 7.4e-41 171.4 208 51.4
Duzib151G0080 Durio zibethinus HOM05D007215 ORTHO05D009019 2.2e-40 169.9 138 68.1
BraA09t40633Z Brassica rapa HOM05D007215 ORTHO05D009019 2.8e-40 169.5 196 55.1
Aqoxy2G03930 Aquilegia oxysepala HOM05D007215 ORTHO05D009019 4.8e-40 168.7 153 58.8
A09p52000 Brassica napus HOM05D007215 ORTHO05D009019 6.3e-40 168.3 196 54.1
Solyc06g053440.3 Solanum lycopersicum HOM05D007215 ORTHO05D009019 6.3e-40 168.3 199 52.8
arahy.Tifrunner.gnm1.ann1.9WZ3F5 Arachis hypogaea HOM05D007215 ORTHO05D009019 8.2e-40 167.9 202 51.5
Lj4g0027849 Lotus japonicus HOM05D007215 ORTHO05D009019 1.4e-39 167.2 198 55.1
CAN.G136.10 Capsicum annuum HOM05D007215 ORTHO05D009019 5.3e-39 165.2 196 49.5
COL.COLO4_00135 Corchorus olitorius HOM05D007215 ORTHO05D009019 9.1e-39 164.5 138 68.1
TWI38G1882 Tripterygium wilfordii HOM05D007215 ORTHO05D009019 9.1e-39 164.5 208 51.4
BcaC07g40499 Brassica carinata HOM05D007215 ORTHO05D009019 1.2e-38 164.1 194 52.6
BolC8t51070H Brassica oleracea HOM05D007215 ORTHO05D009019 1.2e-38 164.1 194 52.6
Eucgr.L00006 Eucalyptus grandis HOM05D007215 ORTHO05D009019 2.0e-38 163.3 189 53.4
AT3G59680 Arabidopsis thaliana HOM05D007215 ORTHO05D009019 4.5e-38 162.2 199 51.3
TAR633G2258 Trochodendron aralioides HOM05D007215 ORTHO05D009019 4.5e-38 162.2 185 53.0
Carub.0005s2640 Capsella rubella HOM05D007215 ORTHO05D009019 1.7e-37 160.2 196 53.6
Thhalv10006255m.g Eutrema salsugineum HOM05D007215 ORTHO05D009019 8.5e-37 157.9 191 51.8
Nn7g37543 Nelumbo nucifera HOM05D007215 ORTHO05D009019 8.5e-37 157.9 194 53.1
AL5G41750 Arabidopsis lyrata HOM05D007215 ORTHO05D009019 1.1e-36 157.5 188 52.1
Ciclev10022275m.g Citrus clementina HOM05D007215 ORTHO05D009019 2.5e-36 156.4 208 50.0
HPP92_023723 Vanilla planifolia HOM05D007215 ORTHO05D009019 9.4e-36 154.5 138 63.8
MBI11_g16037_MAGBIO Magnolia biondii HOM05D007215 ORTHO05D009019 8.0e-35 151.4 189 49.2
Nn1g09545 Nelumbo nucifera HOM05D007215 ORTHO05D009019 1.0e-34 151.0 191 49.2
Oeu021574.1 Olea europaea HOM05D007215 ORTHO05D009019 1.0e-34 151.0 183 50.3
TAR633G0862 Trochodendron aralioides HOM05D007215 ORTHO05D009019 4.0e-34 149.1 155 58.1
HanXRQChr10g0285991 Helianthus annuus HOM05D007215 ORTHO05D009019 2.0e-33 146.7 202 47.0
Rhsim09G0009600 Rhododendron simsii HOM05D007215 ORTHO05D009019 4.4e-33 145.6 175 53.7
Sopen06g018520 Solanum pennellii HOM05D007215 ORTHO05D009019 1.3e-32 144.1 180 48.9
PGSC0003DMG402016333 Solanum tuberosum HOM05D007215 ORTHO05D009019 1.7e-32 143.7 182 51.1
CDE09G0824 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 2.8e-32 142.9 188 47.3
SalBow6G6024 Salvia bowleyana HOM05D007215 ORTHO05D009019 3.7e-32 142.5 189 48.7
CANSAT56G1068 Cannabis sativa HOM05D007215 ORTHO05D009019 4.8e-32 142.1 237 46.0
ATR0743G235 Amborella trichopoda HOM05D007215 ORTHO05D009019 1.1e-31 141.0 132 56.8
Lsat_1_v5_gn_5_190641 Lactuca sativa HOM05D007215 ORTHO05D009019 1.8e-31 140.2 195 46.7
CARHR170050 Cardamine hirsuta HOM05D007215 ORTHO05D009019 2.4e-31 139.8 189 47.6
PSO017G6467 Papaver somniferum HOM05D007215 ORTHO05D009019 2.0e-30 136.7 239 41.8
Aa31LG10G13970 Aethionema arabicum HOM05D007215 ORTHO05D009019 3.5e-30 136.0 175 52.0
THA.LOC104816280 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 7.7e-30 134.8 190 45.8
CDE02G0746 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 6.5e-29 131.7 184 46.7
ECA238G1604 Erigeron canadensis HOM05D007215 ORTHO05D009019 6.5e-29 131.7 180 48.3
PGR042G0468 Punica granatum HOM05D007215 ORTHO05D009019 9.4e-28 127.9 219 44.3
GSVIVG01038146001 Vitis vinifera HOM05D007215 ORTHO05D009019 2.3e-26 123.2 126 53.2
CsaV3_6G007050 Cucumis sativus L. HOM05D007215 ORTHO05D009019 3.4e-25 119.4 220 41.8
Lj6P211T14 Lonicera japonica HOM05D007215 ORTHO05D009019 7.5e-25 118.2 113 51.3
Sp5g03500 Schrenkiella parvula HOM05D007215 ORTHO05D009019 9.8e-25 117.9 196 43.4
MD17G1178000 Malus domestica HOM05D007215 ORTHO05D009019 1.8e-23 113.6 107 63.6
Os01g0393300 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 2.4e-23 113.2 204 40.7
PSO837G0056 Papaver somniferum HOM05D007215 ORTHO05D009019 7.0e-23 111.7 227 41.0
MELO3C022424.2 Cucumis melo HOM05D007215 ORTHO05D009019 2.0e-22 110.2 179 44.7
HPP92_007596 Vanilla planifolia HOM05D007215 ORTHO05D009019 7.2e-20 101.7 138 47.8
Gohir.D10G122900 Gossypium hirsutum HOM05D007215 ORTHO05D009019 1.0e-18 97.8 112 48.2
Migut.I00402 Erythranthe guttata HOM05D007215 ORTHO05D009019 1.8e-18 97.1 104 59.6
Os04g0495900 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 8.6e-13 78.2 204 33.8
Zm00001eb078580 Zea mays HOM05D007215 ORTHO05D009019 6.4e-08 62.0 209 32.1


User provided reference genes

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