Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc25g0002720 Simmondsia chinensis HOM05D006819 ORTHO05D008763 4.6e-32 141.4 119 100.0
FAN14G2986 Fragaria x ananassa HOM05D006819 ORTHO05D008763 1.1e-09 67.0 39 69.2
Sc10g0005770 Simmondsia chinensis HOM05D006819 ORTHO05D008763 3.2e-09 65.5 29 96.6
SalBow2G2822 Salvia bowleyana HOM05D006819 ORTHO05D008763 4.2e-09 65.1 39 64.1
Haze_16531 Corylus avellana HOM05D006819 ORTHO05D008763 1.2e-08 63.5 30 86.7
QL05p028543 Quercus lobata HOM05D006819 ORTHO05D008763 2.7e-08 62.4 30 86.7
Cfa001984 Carpinus fangiana HOM05D006819 ORTHO05D008763 3.6e-08 62.0 30 83.3
Eucgr.J03057 Eucalyptus grandis HOM05D006819 ORTHO05D008763 3.6e-08 62.0 32 78.1
PGR031G3623 Punica granatum HOM05D006819 ORTHO05D008763 3.6e-08 62.0 30 80.0
Thecc.06G069300 Theobroma cacao HOM05D006819 ORTHO05D008763 7.9e-08 60.8 36 66.7
Nn8g39431 Nelumbo nucifera HOM05D006819 ORTHO05D008763 1.4e-07 60.1 30 80.0
Psat5g301600 Pisum sativum HOM05D006819 ORTHO05D008763 1.4e-07 60.1 50 48.0
TWI18G0691 Tripterygium wilfordii HOM05D006819 ORTHO05D008763 1.8e-07 59.7 30 76.7
CAN.G407.98 Capsicum annuum HOM05D006819 ORTHO05D008763 3.0e-07 58.9 29 82.8
Dinv30584 Davidia involucrata HOM05D006819 ORTHO05D008763 5.1e-07 58.2 28 85.7
Nitab4.5_0001764g0060 Nicotiana tabacum HOM05D006819 ORTHO05D008763 6.7e-07 57.8 28 82.1
Nitab4.5_0010254g0010 Nicotiana tabacum HOM05D006819 ORTHO05D008763 6.7e-07 57.8 28 82.1
Solyc03g116560.1 Solanum lycopersicum HOM05D006819 ORTHO05D008763 6.7e-07 57.8 28 82.1
Sopen03g035470 Solanum pennellii HOM05D006819 ORTHO05D008763 6.7e-07 57.8 28 82.1
TAR383G0223 Trochodendron aralioides HOM05D006819 ORTHO05D008763 8.8e-07 57.4 28 82.1
vmacro19477 Vaccinium macrocarpon HOM05D006819 ORTHO05D008763 1.1e-06 57.0 28 78.6
Actinidia01760 Actinidia chinensis HOM05D006819 ORTHO05D008763 1.5e-06 56.6 28 78.6
Rhsim04G0187400 Rhododendron simsii HOM05D006819 ORTHO05D008763 2.0e-06 56.2 28 75.0
ECA232G0226 Erigeron canadensis HOM05D006819 ORTHO05D008763 2.6e-06 55.8 30 76.7
Rhsim08G0214900 Rhododendron simsii HOM05D006819 ORTHO05D008763 2.6e-06 55.8 28 71.4
SHI20606 Sapria himalayana HOM05D006819 ORTHO05D008763 4.4e-06 55.1 30 66.7
ATR0322G052 Amborella trichopoda HOM05D006819 ORTHO05D008763 5.7e-06 54.7 27 81.5
PSO210G0638 Papaver somniferum HOM05D006819 ORTHO05D008763 5.7e-06 54.7 29 72.4
PSO210G6668 Papaver somniferum HOM05D006819 ORTHO05D008763 5.7e-06 54.7 29 72.4
Prupe.3G082900 Prunus persica HOM05D006819 ORTHO05D008763 5.7e-06 54.7 28 78.6
EL10Ac9g21918 Beta vulgaris HOM05D006819 ORTHO05D008763 7.4e-06 54.3 25 84.0
CSS0026240 Camellia sinensis var. sinensis HOM05D006819 ORTHO05D008763 7.4e-06 54.3 28 75.0
Lj5C69T16 Lonicera japonica HOM05D006819 ORTHO05D008763 7.4e-06 54.3 28 71.4
Carub.0001s4161 Capsella rubella HOM05D006819 ORTHO05D008763 9.7e-06 53.9 25 80.0
CsaV3_4G001460 Cucumis sativus L. HOM05D006819 ORTHO05D008763 9.7e-06 53.9 27 70.4
Sp1g39170 Schrenkiella parvula HOM05D006819 ORTHO05D008763 9.7e-06 53.9 27 74.1


User provided reference genes

Program Settings