Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc24g0003580 Simmondsia chinensis HOM05D004163 ORTHO05D004882 6.0e-98 360.9 193 100.0
EL10Ac7g17826 Beta vulgaris HOM05D004163 ORTHO05D004882 1.8e-62 243.0 204 66.2
Sopen09g024070 Solanum pennellii HOM05D004163 ORTHO05D004882 4.2e-59 231.9 193 69.4
PGSC0003DMG400017659 Solanum tuberosum HOM05D004163 ORTHO05D004882 7.2e-59 231.1 193 68.9
vmacro14756 Vaccinium macrocarpon HOM05D004163 ORTHO05D004882 1.2e-58 230.3 196 66.3
Hund05534 Selenicereus undatus HOM05D004163 ORTHO05D004882 1.6e-58 229.9 198 66.7
Hund05538 Selenicereus undatus HOM05D004163 ORTHO05D004882 1.6e-58 229.9 198 66.7
CAN.G154.3 Capsicum annuum HOM05D004163 ORTHO05D004882 6.1e-58 228.0 199 66.3
QL09p054666 Quercus lobata HOM05D004163 ORTHO05D004882 1.0e-57 227.3 190 67.9
Lj2A1132G68 Lonicera japonica HOM05D004163 ORTHO05D004882 3.0e-57 225.7 194 66.0
AUR62008905 Chenopodium quinoa HOM05D004163 ORTHO05D004882 5.2e-57 224.9 208 64.4
Solyc09g061310.3 Solanum lycopersicum HOM05D004163 ORTHO05D004882 5.2e-57 224.9 193 68.4
Actinidia37588 Actinidia chinensis HOM05D004163 ORTHO05D004882 1.5e-56 223.4 215 63.7
Cc01_g17110 Coffea canephora HOM05D004163 ORTHO05D004882 1.3e-55 220.3 201 63.2
FvH4_4g33290 Fragaria vesca HOM05D004163 ORTHO05D004882 1.3e-55 220.3 197 67.0
Actinidia30080 Actinidia chinensis HOM05D004163 ORTHO05D004882 1.7e-55 219.9 211 62.6
Eucgr.K02173 Eucalyptus grandis HOM05D004163 ORTHO05D004882 1.7e-55 219.9 201 60.7
TAR633G1583 Trochodendron aralioides HOM05D004163 ORTHO05D004882 1.7e-55 219.9 208 62.5
Cpa.g.sc8.162 Carica papaya HOM05D004163 ORTHO05D004882 6.3e-55 218.0 190 65.3
FAN15G0391 Fragaria x ananassa HOM05D004163 ORTHO05D004882 8.2e-55 217.6 197 66.5
arahy.Tifrunner.gnm1.ann1.IH4GAK Arachis hypogaea HOM05D004163 ORTHO05D004882 1.4e-54 216.9 197 62.9
HanXRQChr15g0468291 Helianthus annuus HOM05D004163 ORTHO05D004882 1.4e-54 216.9 193 63.2
CANSAT01G0846 Cannabis sativa HOM05D004163 ORTHO05D004882 1.8e-54 216.5 190 66.3
Dinv19207 Davidia involucrata HOM05D004163 ORTHO05D004882 1.8e-54 216.5 210 61.9
FAN27G1937 Fragaria x ananassa HOM05D004163 ORTHO05D004882 1.8e-54 216.5 194 64.9
Gohir.A11G137300 Gossypium hirsutum HOM05D004163 ORTHO05D004882 1.8e-54 216.5 208 61.1
HanXRQChr10g0279771 Helianthus annuus HOM05D004163 ORTHO05D004882 1.8e-54 216.5 193 62.7
GSVIVG01028648001 Vitis vinifera HOM05D004163 ORTHO05D004882 1.8e-54 216.5 185 66.5
arahy.Tifrunner.gnm1.ann1.PP5Q2Q Arachis hypogaea HOM05D004163 ORTHO05D004882 3.1e-54 215.7 197 62.9
vmacro02754 Vaccinium macrocarpon HOM05D004163 ORTHO05D004882 4.1e-54 215.3 207 62.8
Gohir.D11G143700 Gossypium hirsutum HOM05D004163 ORTHO05D004882 5.3e-54 214.9 208 61.1
MD10G1165200 Malus domestica HOM05D004163 ORTHO05D004882 5.3e-54 214.9 198 66.2
RcHm_v2.0_Chr6g0284951 Rosa chinensis HOM05D004163 ORTHO05D004882 5.3e-54 214.9 197 65.5
Carub.0003s0660 Capsella rubella HOM05D004163 ORTHO05D004882 7.0e-54 214.5 185 62.7
Eucgr.K02178 Eucalyptus grandis HOM05D004163 ORTHO05D004882 7.0e-54 214.5 198 60.1
PGR044G0385 Punica granatum HOM05D004163 ORTHO05D004882 7.0e-54 214.5 201 60.2
ECA247G0816 Erigeron canadensis HOM05D004163 ORTHO05D004882 9.1e-54 214.2 194 64.4
Gohir.A08G194200 Gossypium hirsutum HOM05D004163 ORTHO05D004882 9.1e-54 214.2 204 61.3
MD05G1176500 Malus domestica HOM05D004163 ORTHO05D004882 9.1e-54 214.2 198 63.6
CiPaw.03G150300 Carya illinoinensis HOM05D004163 ORTHO05D004882 1.2e-53 213.8 199 63.8
Duzib133G0118 Durio zibethinus HOM05D004163 ORTHO05D004882 1.6e-53 213.4 208 61.5
Gorai.004G225400 Gossypium raimondii HOM05D004163 ORTHO05D004882 2.0e-53 213.0 204 61.3
Hma1.2p1_0970F.1_g242660 Hydrangea macrophylla HOM05D004163 ORTHO05D004882 2.6e-53 212.6 195 64.1
Rhsim13G0044700 Rhododendron simsii HOM05D004163 ORTHO05D004882 2.6e-53 212.6 205 61.0
SGA_v2.0_scaffold1G00744 Striga asiatica HOM05D004163 ORTHO05D004882 2.6e-53 212.6 195 63.1
TAR362G1211 Trochodendron aralioides HOM05D004163 ORTHO05D004882 2.6e-53 212.6 225 59.6
Aqoxy2G03890 Aquilegia oxysepala HOM05D004163 ORTHO05D004882 3.5e-53 212.2 190 64.2
Phvul.008G125200 Phaseolus vulgaris HOM05D004163 ORTHO05D004882 3.5e-53 212.2 193 64.2
CiPaw.04G105700 Carya illinoinensis HOM05D004163 ORTHO05D004882 4.5e-53 211.8 189 64.0
Nn3g19955 Nelumbo nucifera HOM05D004163 ORTHO05D004882 5.9e-53 211.5 203 64.5
Migut.D00532 Erythranthe guttata HOM05D004163 ORTHO05D004882 7.7e-53 211.1 185 63.2
Nn1g07844 Nelumbo nucifera HOM05D004163 ORTHO05D004882 7.7e-53 211.1 209 62.7
THA.LOC104822505 Tarenaya hassleriana HOM05D004163 ORTHO05D004882 7.7e-53 211.1 198 62.1
Atru.chr5.2002 Acer truncatum HOM05D004163 ORTHO05D004882 1.3e-52 210.3 206 62.6
Lj1g0012524 Lotus japonicus HOM05D004163 ORTHO05D004882 1.3e-52 210.3 198 61.1
Gohir.D08G212000 Gossypium hirsutum HOM05D004163 ORTHO05D004882 1.7e-52 209.9 204 60.8
Lalb_Chr01g0022371 Lupinus albus HOM05D004163 ORTHO05D004882 1.7e-52 209.9 201 60.7
MBI10_g18940_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 2.2e-52 209.5 216 59.3
Lalb_Chr03g0041791 Lupinus albus HOM05D004163 ORTHO05D004882 3.8e-52 208.8 193 60.6
Thecc.01G226700 Theobroma cacao HOM05D004163 ORTHO05D004882 5.0e-52 208.4 206 59.7
Manes.13G045400 Manihot esculenta HOM05D004163 ORTHO05D004882 8.5e-52 207.6 208 62.0
Ciclev10021450m.g Citrus clementina HOM05D004163 ORTHO05D004882 1.5e-51 206.8 218 59.2
Duzib138G0078 Durio zibethinus HOM05D004163 ORTHO05D004882 1.9e-51 206.5 202 57.9
Lsat_1_v5_gn_9_12141 Lactuca sativa HOM05D004163 ORTHO05D004882 1.9e-51 206.5 193 60.1
Nitab4.5_0000045g0110 Nicotiana tabacum HOM05D004163 ORTHO05D004882 1.9e-51 206.5 193 63.2
MSTRG.21422 Avicennia marina HOM05D004163 ORTHO05D004882 2.5e-51 206.1 201 59.2
A05p41110 Brassica napus HOM05D004163 ORTHO05D004882 2.5e-51 206.1 186 61.3
BraA05t22837Z Brassica rapa HOM05D001545 ORTHO05D001600 2.5e-51 206.1 186 61.3
Nitab4.5_0006192g0030 Nicotiana tabacum HOM05D004163 ORTHO05D004882 2.5e-51 206.1 192 64.1
BcaB04g21311 Brassica carinata HOM05D004163 ORTHO05D004882 3.2e-51 205.7 185 61.1
COL.COLO4_08179 Corchorus olitorius HOM05D004163 ORTHO05D004882 3.2e-51 205.7 196 60.7
Medtr7g058510 Medicago truncatula HOM05D004163 ORTHO05D004882 3.2e-51 205.7 202 60.4
Potri.002G241700 Populus trichocarpa HOM05D004163 ORTHO05D004882 3.2e-51 205.7 205 61.5
VMungo1383G2575 Vigna mungo HOM05D004163 ORTHO05D004882 3.2e-51 205.7 193 62.7
MSTRG.17551 Avicennia marina HOM05D004163 ORTHO05D004882 7.2e-51 204.5 200 60.5
Psat3g145080 Pisum sativum HOM05D004163 ORTHO05D004882 7.2e-51 204.5 202 61.4
TWI36G1488 Tripterygium wilfordii HOM05D004163 ORTHO05D004882 7.2e-51 204.5 200 61.0
Gorai.007G153900 Gossypium raimondii HOM05D004163 ORTHO05D004882 9.4e-51 204.1 207 58.5
unitig_22.g6322 Utricularia gibba HOM05D004163 ORTHO05D004882 9.4e-51 204.1 185 61.1
ClCG09G009070 Citrullus lanatus HOM05D004163 ORTHO05D004882 1.2e-50 203.8 196 60.2
Prupe.8G203600 Prunus persica HOM05D004163 ORTHO05D004882 1.6e-50 203.4 198 61.6
AL3G18320 Arabidopsis lyrata HOM05D004163 ORTHO05D004882 2.1e-50 203.0 185 60.5
C05p60290 Brassica napus HOM05D001545 ORTHO05D001600 2.1e-50 203.0 186 61.8
Glyma.18G170900 Glycine max HOM05D004163 ORTHO05D004882 3.6e-50 202.2 201 60.2
AT3G07090 Arabidopsis thaliana HOM05D004163 ORTHO05D004882 4.7e-50 201.8 185 60.0
Ca_07522_v3 Cicer arietinum L. HOM05D004163 ORTHO05D004882 4.7e-50 201.8 208 56.7
BcaC05g29838 Brassica carinata HOM05D004163 ORTHO05D004882 6.1e-50 201.4 186 60.8
BolC5t34677H Brassica oleracea HOM05D001545 ORTHO05D001600 6.1e-50 201.4 186 60.8
Thhalv10021308m.g Eutrema salsugineum HOM05D004163 ORTHO05D004882 6.1e-50 201.4 190 60.5
TWI18G0775 Tripterygium wilfordii HOM05D004163 ORTHO05D004882 6.1e-50 201.4 214 57.5
MBI15_g26747_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 8.0e-50 201.1 212 57.1
PSO832G2991 Papaver somniferum HOM05D004163 ORTHO05D004882 8.0e-50 201.1 187 63.6
Sabra02G0184100 Salix brachista HOM05D004163 ORTHO05D004882 1.0e-49 200.7 214 57.9
PSO339G2763 Papaver somniferum HOM05D004163 ORTHO05D004882 1.4e-49 200.3 187 63.6
BcaC09g47939 Brassica carinata HOM05D004163 ORTHO05D004882 1.8e-49 199.9 185 59.5
BolC1t05569H Brassica oleracea HOM05D001545 ORTHO05D001600 1.8e-49 199.9 185 59.5
CsaV3_7G025890 Cucumis sativus L. HOM05D004163 ORTHO05D004882 1.8e-49 199.9 201 59.7
PSO339G4819 Papaver somniferum HOM05D004163 ORTHO05D004882 2.3e-49 199.5 187 63.1
MELO3C021008.2 Cucumis melo HOM05D004163 ORTHO05D004882 4.0e-49 198.7 193 59.1
CARHR081680 Cardamine hirsuta HOM05D004163 ORTHO05D004882 5.2e-49 198.4 185 61.6
Manes.12G047002 Manihot esculenta HOM05D004163 ORTHO05D004882 5.2e-49 198.4 203 60.6
BcaC05g29756 Brassica carinata HOM05D004163 ORTHO05D004882 8.8e-49 197.6 185 60.0
BNapus_Darmor_BZH_scaffold_109p00240 Brassica napus HOM05D001545 ORTHO05D001600 8.8e-49 197.6 185 60.0
Sp3g06030 Schrenkiella parvula HOM05D004163 ORTHO05D004882 8.8e-49 197.6 192 59.4
CDE02G0060 Ceratophyllum demersum HOM05D004163 ORTHO05D004882 1.5e-48 196.8 190 60.5
TPR.G9029 Trifolium pratense HOM05D004163 ORTHO05D004882 1.5e-48 196.8 195 57.4
BraA01t04398Z Brassica rapa HOM05D004163 ORTHO05D004882 3.4e-48 195.7 186 59.7
Glyma.08G354700 Glycine max HOM05D004163 ORTHO05D004882 3.4e-48 195.7 201 57.2
PSO675G2819 Papaver somniferum HOM05D004163 ORTHO05D004882 3.4e-48 195.7 187 62.0
Aa31LG5G17650 Aethionema arabicum HOM05D004163 ORTHO05D004882 7.5e-48 194.5 185 60.0
AUR62031805 Chenopodium quinoa HOM05D004163 ORTHO05D004882 2.2e-47 193.0 208 59.1
MBI16_g22910_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 2.2e-47 193.0 230 53.9
Aa31sc164G40 Aethionema arabicum HOM05D004163 ORTHO05D004882 3.7e-47 192.2 193 56.0
DCAR_012637 Daucus carota HOM05D004163 ORTHO05D004882 6.3e-47 191.4 193 58.0
MBI18_g31614_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 8.3e-47 191.0 205 56.6
ATR0736G127 Amborella trichopoda HOM05D004163 ORTHO05D004882 1.8e-46 189.9 202 56.9
Sed0004920 Sechium edule HOM05D004163 ORTHO05D004882 3.1e-46 189.1 203 55.7
HPP92_008969 Vanilla planifolia HOM05D004163 ORTHO05D004882 2.0e-45 186.4 185 58.4
Zm00001eb258670 Zea mays HOM05D004163 ORTHO05D004882 2.0e-45 186.4 199 57.3
Peaxi162Scf00107g01625 Petunia axillaris HOM05D004163 ORTHO05D004882 3.5e-45 185.7 202 58.9
AagrBONN_evm.TU.Sc2ySwM_117.3750 Anthoceros agrestis HOM05D004163 ORTHO05D004882 1.7e-44 183.3 203 55.2
BcaB04g21309 Brassica carinata HOM05D004163 ORTHO05D004882 3.8e-44 182.2 185 57.3
Sed0020546 Sechium edule HOM05D004163 ORTHO05D004882 6.5e-44 181.4 200 54.0
Os10g0472400 Oryza sativa ssp. japonica HOM05D004163 ORTHO05D004882 1.1e-43 180.6 197 53.8
Os02g0814000 Oryza sativa ssp. japonica HOM05D004163 ORTHO05D004882 4.2e-43 178.7 193 56.0
CSS0028699 Camellia sinensis var. sinensis HOM05D004163 ORTHO05D004882 5.5e-43 178.3 196 56.6
CSS0045261 Camellia sinensis var. sinensis HOM05D004163 ORTHO05D004882 7.2e-43 177.9 196 56.6
Lsat_1_v5_gn_5_180180 Lactuca sativa HOM05D004163 ORTHO05D004882 1.2e-42 177.2 196 55.6
DCAR_000532 Daucus carota HOM05D004163 ORTHO05D004882 2.1e-42 176.4 195 55.4
MBI05_g47467_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 4.7e-42 175.3 212 52.8
ECA236G3105 Erigeron canadensis HOM05D004163 ORTHO05D004882 2.3e-41 172.9 184 53.8
Zm00001eb221910 Zea mays HOM05D004163 ORTHO05D004882 3.4e-40 169.1 210 52.9
SMO146G0295 Selaginella moellendorffii HOM05D004163 ORTHO05D004882 4.1e-38 162.2 193 51.3
MELO3C026664.2 Cucumis melo HOM05D004163 ORTHO05D004882 1.2e-37 160.6 200 49.0
ClCG07G001940 Citrullus lanatus HOM05D004163 ORTHO05D004882 2.3e-36 156.4 210 48.6
HanXRQChr10g0287331 Helianthus annuus HOM05D004163 ORTHO05D004882 2.9e-36 156.0 185 50.3
CsaV3_3G029920 Cucumis sativus L. HOM05D004163 ORTHO05D004882 1.5e-35 153.7 211 46.9
Lsat_1_v5_gn_8_90020 Lactuca sativa HOM05D004163 ORTHO05D004882 1.5e-35 153.7 185 50.8
HanXRQChr04g0110741 Helianthus annuus HOM05D004163 ORTHO05D004882 7.2e-35 151.4 183 49.7
Pp3c14_10250 Physcomitrium patens HOM05D004163 ORTHO05D004882 7.2e-35 151.4 225 46.2
Mapoly0051s0047 Marchantia polymorpha HOM05D004163 ORTHO05D004882 2.8e-34 149.4 209 46.9
MBI05_g08208_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 5.4e-30 135.2 193 49.2
Haze_24789 Corylus avellana HOM05D004163 ORTHO05D004882 1.6e-29 133.7 150 57.3
MBI05_g47552_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 8.6e-28 127.9 198 48.0
CBR_g567 Chara braunii HOM05D004163 ORTHO05D004882 1.5e-27 127.1 272 39.3
MD05G1176100 Malus domestica HOM05D004163 ORTHO05D004882 1.5e-27 127.1 82 74.4
C07p01630 Brassica napus HOM05D004163 ORTHO05D004882 9.5e-27 124.4 179 48.6
Cpa.g.sc997.5 Carica papaya HOM05D004163 ORTHO05D004882 1.8e-25 120.2 208 39.9
Pp3c11_1330 Physcomitrium patens HOM05D004163 ORTHO05D004882 3.5e-21 105.9 156 43.6
Peaxi162Scf00107g01626 Petunia axillaris HOM05D004163 ORTHO05D004882 3.0e-20 102.8 125 55.2
BcaC06g36633 Brassica carinata HOM05D004163 ORTHO05D004882 1.1e-19 100.9 132 50.8
BolC7t40606H Brassica oleracea HOM05D004163 ORTHO05D004882 1.2e-18 97.4 126 52.4
SMO173G0033 Selaginella moellendorffii HOM05D004163 ORTHO05D004882 8.1e-18 94.7 61 67.2
Hma1.2p1_0812F.1_g222380 Hydrangea macrophylla HOM05D004163 ORTHO05D004882 2.3e-17 93.2 125 53.6
SHI28736 Sapria himalayana HOM05D004163 ORTHO05D004882 5.2e-17 92.0 80 57.5
PRCOL_00000114 Prasinoderma coloniale HOM05D004163 ORTHO05D004882 8.9e-17 91.3 72 54.2
Peaxi162Scf00517g00519 Petunia axillaris HOM05D004163 ORTHO05D004882 3.7e-15 85.9 152 42.8
MCO11G711 Micromonas commoda HOM05D004163 ORTHO05D004882 1.9e-14 83.6 65 53.8
Lsat_1_v5_gn_9_120120 Lactuca sativa HOM05D004163 ORTHO05D004882 3.2e-14 82.8 57 70.2
C07p12700 Brassica napus HOM05D004163 ORTHO05D004882 7.8e-13 78.2 131 40.5
BcaC06g35635 Brassica carinata HOM05D004163 ORTHO05D004882 8.6e-12 74.7 165 36.4
Cfa025778 Carpinus fangiana HOM05D004163 ORTHO05D004882 2.5e-11 73.2 91 37.4
C07p01970 Brassica napus HOM05D004163 ORTHO05D004882 9.5e-11 71.2 126 38.9
CDE01G0537 Ceratophyllum demersum HOM05D004163 ORTHO05D004882 2.1e-10 70.1 102 51.0
SHI28738 Sapria himalayana HOM05D004163 ORTHO05D004882 5.8e-08 62.0 135 36.3
Cre12.g555850 Chlamydomonas reinhardtii HOM05D004163 ORTHO05D004882 2.4e-06 56.6 67 32.8


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