Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 0.0e+00 1266.1 662 100.0
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 3.5e-81 307.0 708 34.9
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 6.0e-81 306.2 753 33.7
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 3.9e-80 303.5 767 32.9
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 4.3e-79 300.1 675 34.1
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 3.8e-75 287.0 774 33.3
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 7.9e-73 279.3 741 32.5
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 9.0e-69 265.8 752 31.8
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 1.2e-68 265.4 744 32.4
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 1.0e-67 262.3 685 31.7
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 5.0e-67 260.0 763 31.7
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 1.1e-66 258.8 737 30.3
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.4e-66 258.5 742 30.6
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 4.2e-66 256.9 714 31.9
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 4.2e-66 256.9 710 31.1
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 1.2e-65 255.4 753 32.3
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 1.6e-65 255.0 723 30.4
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 6.1e-65 253.1 726 31.1
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 7.9e-65 252.7 793 30.8
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 1.0e-64 252.3 709 30.9
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 2.3e-64 251.1 761 32.7
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 5.1e-64 250.0 690 31.3
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 2.5e-63 247.7 666 32.1
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 9.7e-63 245.7 746 32.2
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 4.8e-62 243.4 708 29.9
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 1.1e-61 242.3 739 31.1
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 2.4e-61 241.1 738 30.6
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 5.3e-61 240.0 750 31.9
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 5.3e-61 240.0 737 31.1
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.2e-60 238.8 750 32.0
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.0e-60 238.0 750 31.7
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 2.0e-60 238.0 732 30.7
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 3.4e-60 237.3 742 30.5
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 3.4e-60 237.3 713 32.0
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 4.5e-60 236.9 686 31.5
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 4.5e-60 236.9 713 32.1
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 4.5e-60 236.9 655 32.7
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 5.9e-60 236.5 757 31.3
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 1.0e-59 235.7 737 30.3
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 1.7e-59 235.0 771 30.5
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 1.1e-58 232.3 778 31.1
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 2.5e-58 231.1 687 32.0
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 2.3e-56 224.6 817 29.3
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 3.0e-56 224.2 726 30.3
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.1e-55 222.2 567 32.6
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 1.5e-55 221.9 688 30.8
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 2.6e-55 221.1 629 32.8
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 7.4e-55 219.5 747 29.6
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 9.7e-55 219.2 737 29.9
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 9.7e-55 219.2 709 30.5
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 2.8e-54 217.6 713 29.3
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 2.8e-54 217.6 713 29.7
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 2.8e-54 217.6 707 30.6
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 6.3e-54 216.5 748 28.3
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 3.1e-53 214.2 753 27.5
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 7.0e-53 213.0 713 30.4
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 1.5e-52 211.8 761 29.2
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 1.5e-52 211.8 537 34.8
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 4.5e-52 210.3 661 30.1
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 1.0e-51 209.1 619 32.1
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 2.9e-51 207.6 678 28.0
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 1.5e-50 205.3 619 31.7
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.5e-50 204.5 627 31.7
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 7.2e-50 203.0 711 29.4
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 2.7e-49 201.1 702 28.2
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 2.7e-49 201.1 702 28.2
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 3.6e-49 200.7 655 32.7
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 2.3e-48 198.0 716 28.6
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 3.0e-48 197.6 717 29.6
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 4.4e-47 193.7 725 28.1
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 5.7e-47 193.4 610 30.3
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 1.1e-45 189.1 667 28.2
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 1.4e-45 188.7 632 30.5
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 4.1e-45 187.2 683 29.9
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 5.3e-45 186.8 679 28.9
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 7.0e-45 186.4 585 30.9
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 7.0e-45 186.4 472 33.3
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 3.5e-44 184.1 716 27.7
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 1.7e-43 181.8 723 27.1
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 2.9e-43 181.0 778 26.3
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 2.5e-42 177.9 598 29.4
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 9.4e-42 176.0 574 29.6
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 2.7e-41 174.5 483 32.7
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 6.1e-41 173.3 662 27.3
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 2.3e-40 171.4 722 27.0
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 4.0e-40 170.6 506 30.4
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 5.7e-39 166.8 653 29.2
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 4.8e-38 163.7 692 26.7
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 3.1e-37 161.0 733 26.3
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 7.7e-36 156.4 503 30.2
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 7.7e-36 156.4 503 30.2
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 1.3e-35 155.6 504 30.6
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 1.9e-34 151.8 666 26.9
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 2.5e-34 151.4 707 26.7
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 2.1e-33 148.3 559 27.5
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 6.1e-33 146.7 694 26.4
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 1.2e-31 142.5 364 33.8
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 1.2e-28 132.5 403 29.5
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.6e-25 122.1 684 24.4
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 2.5e-18 98.2 701 23.8
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 5.6e-18 97.1 273 32.2
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 4.7e-17 94.0 732 22.8
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 3.2e-13 81.3 121 41.3
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 4.1e-13 80.9 644 23.1
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 1.7e-11 75.5 150 40.7
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 4.3e-10 70.9 235 28.5
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 1.1e-08 66.2 507 22.3
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 4.9e-06 57.4 74 43.2


User provided reference genes

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