Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc23g0006220 Simmondsia chinensis HOM05D000372 ORTHO05D003436 2.0e-138 495.7 249 100.0
Sc23g0006190 Simmondsia chinensis HOM05D000372 ORTHO05D003436 4.0e-70 268.9 296 56.1
Sc09g0010830 Simmondsia chinensis HOM05D000372 ORTHO05D003436 2.8e-47 193.0 311 45.3
EL10Ac2g02429 Beta vulgaris HOM05D000372 ORTHO05D003436 3.5e-42 176.0 311 41.5
AUR62020299 Chenopodium quinoa HOM05D000372 ORTHO05D003436 8.7e-41 171.4 316 41.5
Ah.10g025030 Amaranthus hybridus HOM05D000372 ORTHO05D003436 1.1e-40 171.0 301 42.2
FAN15G3394 Fragaria x ananassa HOM05D000372 ORTHO05D003436 4.3e-40 169.1 310 41.9
FAN20G1896 Fragaria x ananassa HOM05D000372 ORTHO05D003436 5.7e-40 168.7 310 41.6
FvH4_2g37120 Fragaria vesca HOM05D000372 ORTHO05D003436 7.4e-40 168.3 310 41.6
FAN27G2462 Fragaria x ananassa HOM05D000372 ORTHO05D003436 7.4e-40 168.3 310 41.6
RcHm_v2.0_Chr6g0304671 Rosa chinensis HOM05D000372 ORTHO05D003436 2.2e-39 166.8 326 40.2
Dinv19797 Davidia involucrata HOM05D000372 ORTHO05D003436 3.1e-38 162.9 316 39.2
AUR62037701 Chenopodium quinoa HOM05D000372 ORTHO05D003436 4.1e-38 162.5 316 39.9
Dinv06101 Davidia involucrata HOM05D000372 ORTHO05D003436 1.2e-37 161.0 315 39.4
Prupe.1G400900 Prunus persica HOM05D000372 ORTHO05D003436 3.4e-37 159.5 320 39.7
Manes.03G005600 Manihot esculenta HOM05D000372 ORTHO05D003436 2.9e-36 156.4 309 40.1
Hma1.2p1_0102F.1_g049740 Hydrangea macrophylla HOM05D000372 ORTHO05D003436 1.4e-35 154.1 316 39.2
Potri.006G270500 Populus trichocarpa HOM05D000372 ORTHO05D003436 1.4e-35 154.1 315 38.4
VMungo1309G2648 Vigna mungo HOM05D000372 ORTHO05D003436 4.2e-35 152.5 308 39.0
TAR383G1081 Trochodendron aralioides HOM05D000372 ORTHO05D003436 5.5e-35 152.1 334 37.7
Glyma.14G105400 Glycine max HOM05D000372 ORTHO05D003436 1.6e-34 150.6 316 38.0
Sabra18G0012300 Salix brachista HOM05D000372 ORTHO05D003436 1.6e-34 150.6 320 37.8
Manes.16G133700 Manihot esculenta HOM05D000372 ORTHO05D003436 2.1e-34 150.2 310 38.7
QL02p017417 Quercus lobata HOM05D000372 ORTHO05D003436 2.1e-34 150.2 316 37.0
Thecc.09G009700 Theobroma cacao HOM05D000372 ORTHO05D003436 3.6e-34 149.4 319 39.5
Lj7C743T9 Lonicera japonica HOM05D000372 ORTHO05D003436 6.1e-34 148.7 317 37.5
MBI14_g24282_MAGBIO Magnolia biondii HOM05D000372 ORTHO05D003436 7.9e-34 148.3 309 38.2
Phvul.009G084900 Phaseolus vulgaris HOM05D000372 ORTHO05D003436 7.9e-34 148.3 320 37.2
Sabra06G0210300 Salix brachista HOM05D000372 ORTHO05D003436 1.0e-33 147.9 315 37.8
Duzib187G1714 Durio zibethinus HOM05D000372 ORTHO05D003436 1.4e-33 147.5 318 38.4
arahy.Tifrunner.gnm1.ann1.2363PW Arachis hypogaea HOM05D000372 ORTHO05D003436 1.8e-33 147.1 301 39.2
THA.LOC104819942 Tarenaya hassleriana HOM05D000372 ORTHO05D003436 2.3e-33 146.7 307 37.1
COL.COLO4_19011 Corchorus olitorius HOM05D000372 ORTHO05D003436 3.0e-33 146.4 314 37.3
Glyma.04G058400 Glycine max HOM05D000372 ORTHO05D003436 3.0e-33 146.4 317 36.9
Potri.018G011400 Populus trichocarpa HOM05D000372 ORTHO05D003436 3.0e-33 146.4 315 37.5
Glyma.17G220800 Glycine max HOM05D000372 ORTHO05D003436 3.9e-33 146.0 316 37.7
arahy.Tifrunner.gnm1.ann1.54Q5ZL Arachis hypogaea HOM05D000372 ORTHO05D003436 5.1e-33 145.6 312 38.5
CSS0035630 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 5.1e-33 145.6 317 37.9
Phvul.001G043600 Phaseolus vulgaris HOM05D000372 ORTHO05D003436 5.1e-33 145.6 320 37.2
arahy.Tifrunner.gnm1.ann1.672M4G Arachis hypogaea HOM05D000372 ORTHO05D003436 6.7e-33 145.2 312 37.5
Sed0022125 Sechium edule HOM05D000372 ORTHO05D003436 6.7e-33 145.2 306 37.6
ATR0580G441 Amborella trichopoda HOM05D000372 ORTHO05D003436 8.8e-33 144.8 307 38.4
arahy.Tifrunner.gnm1.ann1.IKLL4G Arachis hypogaea HOM05D000372 ORTHO05D003436 1.1e-32 144.4 301 38.9
ClCG05G016010 Citrullus lanatus HOM05D000372 ORTHO05D003436 1.5e-32 144.1 309 37.9
VMungo0647G1491 Vigna mungo HOM05D000372 ORTHO05D003436 1.9e-32 143.7 331 37.2
DCAR_003039 Daucus carota HOM05D000372 ORTHO05D003436 2.5e-32 143.3 317 37.9
TWI63G0489 Tripterygium wilfordii HOM05D000372 ORTHO05D003436 2.5e-32 143.3 311 37.3
SalBow8G1746 Salvia bowleyana HOM05D000372 ORTHO05D003436 5.7e-32 142.1 297 38.0
MD15G1046500 Malus domestica HOM05D000372 ORTHO05D003436 7.4e-32 141.7 326 37.1
Sed0000787 Sechium edule HOM05D000372 ORTHO05D003436 9.7e-32 141.4 309 36.6
TWI32G0796 Tripterygium wilfordii HOM05D000372 ORTHO05D003436 9.7e-32 141.4 310 37.7
Ca_15798_v3 Cicer arietinum L. HOM05D000372 ORTHO05D003436 2.2e-31 140.2 298 37.6
Aqoxy7G03181 Aquilegia oxysepala HOM05D000372 ORTHO05D003436 2.8e-31 139.8 302 37.1
Glyma.U003300 Glycine max HOM05D000372 ORTHO05D003436 2.8e-31 139.8 320 36.2
Migut.A00416 Erythranthe guttata HOM05D000372 ORTHO05D003436 3.7e-31 139.4 296 38.9
Lj1g0015187 Lotus japonicus HOM05D000372 ORTHO05D003436 6.3e-31 138.7 323 35.3
PGR044G0422 Punica granatum HOM05D000372 ORTHO05D003436 6.3e-31 138.7 296 37.2
Duzib168G1416 Durio zibethinus HOM05D000372 ORTHO05D003436 1.1e-30 137.9 296 37.8
Aa31sc15G100 Aethionema arabicum HOM05D000372 ORTHO05D003436 4.1e-30 136.0 248 38.7
BraA03t09813Z Brassica rapa HOM05D000372 ORTHO05D003436 3.4e-29 132.9 304 34.5
CSS0018460 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 1.3e-28 131.0 246 41.9
vmacro05111 Vaccinium macrocarpon HOM05D000372 ORTHO05D003436 2.9e-28 129.8 341 34.9
Oeu008769.1 Olea europaea HOM05D000372 ORTHO05D003436 3.8e-28 129.4 317 34.7
THA.LOC104803327 Tarenaya hassleriana HOM05D000372 ORTHO05D003436 5.0e-28 129.0 299 35.1
Cfa017850 Carpinus fangiana HOM05D000372 ORTHO05D003436 8.5e-28 128.3 276 39.1
Lsat_1_v5_gn_5_62200 Lactuca sativa HOM05D000372 ORTHO05D003436 1.9e-27 127.1 307 34.9
AL6G21200 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 9.4e-27 124.8 231 39.8
ECA246G0477 Erigeron canadensis HOM05D000372 ORTHO05D003436 9.4e-27 124.8 311 35.4
ECA240G4325 Erigeron canadensis HOM05D000372 ORTHO05D003436 1.6e-26 124.0 311 35.7
Migut.E01430 Erythranthe guttata HOM05D000372 ORTHO05D003436 1.6e-26 124.0 221 40.3
HanXRQChr03g0082521 Helianthus annuus HOM05D000372 ORTHO05D003436 2.1e-26 123.6 296 33.8
Psat6g023640 Pisum sativum HOM05D000372 ORTHO05D003436 2.7e-26 123.2 287 35.2
C02p04600 Brassica napus HOM05D000372 ORTHO05D003436 3.6e-26 122.9 250 39.2
BcaC03g13326 Brassica carinata HOM05D000372 ORTHO05D003436 4.7e-26 122.5 250 38.0
BcaB08g37314 Brassica carinata HOM05D000372 ORTHO05D003436 6.1e-26 122.1 240 39.6
BcaC04g19290 Brassica carinata HOM05D000372 ORTHO05D003436 7.9e-26 121.7 240 38.8
A10p26890 Brassica napus HOM05D000372 ORTHO05D003436 7.9e-26 121.7 240 38.8
C09p66090 Brassica napus HOM05D000372 ORTHO05D003436 7.9e-26 121.7 240 38.8
BolC9t59429H Brassica oleracea HOM05D000372 ORTHO05D003436 7.9e-26 121.7 240 38.8
BraA10t44741Z Brassica rapa HOM05D000372 ORTHO05D003436 7.9e-26 121.7 240 38.8
Sp6g32740 Schrenkiella parvula HOM05D000372 ORTHO05D003436 7.9e-26 121.7 251 39.0
GSVIVG01033164001 Vitis vinifera HOM05D000372 ORTHO05D003436 1.0e-25 121.3 256 38.7
AL6G21260 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 1.8e-25 120.6 236 39.8
Aa31LG3G16390 Aethionema arabicum HOM05D000372 ORTHO05D003436 2.3e-25 120.2 262 36.6
AT5G10720 Arabidopsis thaliana HOM05D000372 ORTHO05D003436 2.3e-25 120.2 257 37.7
CARHR202600 Cardamine hirsuta HOM05D000372 ORTHO05D003436 2.3e-25 120.2 252 38.5
Thhalv10012606m.g Eutrema salsugineum HOM05D000372 ORTHO05D003436 3.0e-25 119.8 249 39.4
C03p05430 Brassica napus HOM05D000372 ORTHO05D003436 3.9e-25 119.4 259 37.8
BolC3t13054H Brassica oleracea HOM05D000372 ORTHO05D003436 3.9e-25 119.4 259 37.8
Psat5g033760 Pisum sativum HOM05D000372 ORTHO05D003436 5.1e-25 119.0 294 37.1
A02p00610 Brassica napus HOM05D000372 ORTHO05D003436 8.8e-25 118.2 254 37.0
A03p04730 Brassica napus HOM05D000372 ORTHO05D003436 8.8e-25 118.2 263 36.9
BraA02t05044Z Brassica rapa HOM05D000372 ORTHO05D003436 8.8e-25 118.2 254 37.0
BolC2t06420H Brassica oleracea HOM05D000372 ORTHO05D003436 1.1e-24 117.9 254 37.0
Carub.0006s0919 Capsella rubella HOM05D000372 ORTHO05D003436 1.1e-24 117.9 249 37.8
Migut.E00913 Erythranthe guttata HOM05D000372 ORTHO05D003436 1.1e-24 117.9 295 33.6
PSO063G4267 Papaver somniferum HOM05D000372 ORTHO05D003436 1.1e-24 117.9 267 36.7
PSO782G1259 Papaver somniferum HOM05D000372 ORTHO05D003436 1.1e-24 117.9 267 36.7
Pp3c1_29920 Physcomitrium patens HOM05D000372 ORTHO05D003436 1.1e-24 117.9 323 34.4
HanXRQChr06g0174111 Helianthus annuus HOM05D000372 ORTHO05D003436 2.0e-24 117.1 296 35.1
BcaB01g05503 Brassica carinata HOM05D000372 ORTHO05D003436 2.6e-24 116.7 324 31.5
CSS0002412 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 2.6e-24 116.7 296 34.1
BcaB01g06275 Brassica carinata HOM05D000372 ORTHO05D003436 3.3e-24 116.3 230 39.6
BcaB05g21500 Brassica carinata HOM05D000372 ORTHO05D003436 9.7e-24 114.8 319 32.0
Hund25587 Selenicereus undatus HOM05D000372 ORTHO05D003436 1.3e-23 114.4 67 91.0
Sp2g06120 Schrenkiella parvula HOM05D000372 ORTHO05D003436 1.7e-23 114.0 296 33.4
Sc23g0007090 Simmondsia chinensis HOM05D000372 ORTHO05D003436 1.7e-23 114.0 67 94.0
Sp2g22540 Schrenkiella parvula HOM05D000372 ORTHO05D003436 2.8e-23 113.2 269 34.9
CSS0030725 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 3.7e-23 112.8 303 34.0
Pp3c2_6520 Physcomitrium patens HOM05D000372 ORTHO05D003436 3.7e-23 112.8 317 31.5
Nn8g40299 Nelumbo nucifera HOM05D000372 ORTHO05D003436 4.8e-23 112.5 67 89.6
Ca_13081_v3 Cicer arietinum L. HOM05D000372 ORTHO05D003436 6.3e-23 112.1 67 89.6
Ciclev10010162m.g Citrus clementina HOM05D000372 ORTHO05D003436 6.3e-23 112.1 67 89.6
Medtr1g013360 Medicago truncatula HOM05D000372 ORTHO05D003436 6.3e-23 112.1 67 89.6
TPR.G38926 Trifolium pratense HOM05D000372 ORTHO05D003436 6.3e-23 112.1 67 89.6
MD08G1047400 Malus domestica HOM05D000372 ORTHO05D003436 8.2e-23 111.7 67 89.6
Haze_18342 Corylus avellana HOM05D000372 ORTHO05D003436 1.1e-22 111.3 67 88.1
Lj5g0022261 Lotus japonicus HOM05D000372 ORTHO05D003436 1.1e-22 111.3 67 88.1
Psat7g193560 Pisum sativum HOM05D000372 ORTHO05D003436 1.1e-22 111.3 67 88.1
CAN.G808.7 Capsicum annuum HOM05D000372 ORTHO05D003436 1.4e-22 110.9 67 88.1
Cc08_g06200 Coffea canephora HOM05D000372 ORTHO05D003436 1.4e-22 110.9 67 88.1
Peaxi162Scf00288g01010 Petunia axillaris HOM05D000372 ORTHO05D003436 1.4e-22 110.9 67 88.1
Solyc08g068960.3 Solanum lycopersicum HOM05D000372 ORTHO05D003436 1.4e-22 110.9 67 88.1
Sopen08g022620 Solanum pennellii HOM05D000372 ORTHO05D003436 1.4e-22 110.9 67 88.1
PGSC0003DMG400029542 Solanum tuberosum HOM05D000372 ORTHO05D003436 1.4e-22 110.9 67 88.1
CANSAT25G2139 Cannabis sativa HOM05D000372 ORTHO05D003436 2.4e-22 110.2 67 86.6
CiPaw.16G070900 Carya illinoinensis HOM05D000372 ORTHO05D003436 2.4e-22 110.2 67 88.1
Lsat_1_v5_gn_3_25440 Lactuca sativa HOM05D000372 ORTHO05D003436 2.4e-22 110.2 67 86.6
Medtr3g105590 Medicago truncatula HOM05D000372 ORTHO05D003436 2.4e-22 110.2 67 86.6
Gohir.A05G062700 Gossypium hirsutum HOM05D000372 ORTHO05D003436 3.1e-22 109.8 67 86.6
Gohir.A05G063000 Gossypium hirsutum HOM05D000372 ORTHO05D003436 3.1e-22 109.8 67 86.6
Gohir.D05G065200 Gossypium hirsutum HOM05D000372 ORTHO05D003436 3.1e-22 109.8 67 86.6
Gohir.D05G065500 Gossypium hirsutum HOM05D000372 ORTHO05D003436 3.1e-22 109.8 67 86.6
Gorai.009G066000 Gossypium raimondii HOM05D000372 ORTHO05D003436 3.1e-22 109.8 67 86.6
Gorai.009G066300 Gossypium raimondii HOM05D000372 ORTHO05D003436 3.1e-22 109.8 67 86.6
Nitab4.5_0006884g0010 Nicotiana tabacum HOM05D000372 ORTHO05D003436 5.3e-22 109.0 67 86.6
Rhsim07G0169300 Rhododendron simsii HOM05D000372 ORTHO05D003436 5.3e-22 109.0 67 86.6
SEGI_17810 Sequoiadendron giganteum HOM05D000372 ORTHO05D003436 5.3e-22 109.0 67 85.1
CSS0020280 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 7.0e-22 108.6 67 86.6
MELO3C016937.2 Cucumis melo HOM05D000372 ORTHO05D003436 7.0e-22 108.6 66 87.9
CsaV3_4G036290 Cucumis sativus L. HOM05D000372 ORTHO05D003436 7.0e-22 108.6 66 87.9
Lalb_Chr14g0375411 Lupinus albus HOM05D000372 ORTHO05D003436 9.1e-22 108.2 67 86.6
Medtr1g014670 Medicago truncatula HOM05D000372 ORTHO05D003436 1.2e-21 107.8 67 86.6
Duzib150G0268 Durio zibethinus HOM05D000372 ORTHO05D003436 3.4e-21 106.3 67 86.6
Actinidia23121 Actinidia chinensis HOM05D000372 ORTHO05D003436 5.9e-21 105.5 67 83.6
TPR.G21426 Trifolium pratense HOM05D000372 ORTHO05D003436 5.9e-21 105.5 67 83.6
Psat6g023560 Pisum sativum HOM05D000372 ORTHO05D003436 1.7e-20 104.0 67 80.6
CSS0045271 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 2.2e-20 103.6 66 81.8
SalBow4G3322 Salvia bowleyana HOM05D000372 ORTHO05D003436 3.8e-20 102.8 67 82.1
Mapoly0139s0010 Marchantia polymorpha HOM05D000372 ORTHO05D003436 5.0e-20 102.4 64 85.9
Eucgr.C04019 Eucalyptus grandis HOM05D000372 ORTHO05D003436 1.9e-19 100.5 67 79.1
Lsat_1_v5_gn_3_116581 Lactuca sativa HOM05D000372 ORTHO05D003436 3.2e-19 99.8 67 79.1
HPP92_011627 Vanilla planifolia HOM05D000372 ORTHO05D003436 3.2e-19 99.8 67 80.6
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 5.5e-19 99.0 80 73.8
TPR.G38882 Trifolium pratense HOM05D000372 ORTHO05D003436 7.2e-19 98.6 67 80.6
Oeu023248.1 Olea europaea HOM05D000372 ORTHO05D003436 1.2e-18 97.8 65 78.5
Zm00001eb274910 Zea mays HOM05D000372 ORTHO05D003436 1.6e-18 97.4 67 77.6
Os06g0654300 Oryza sativa ssp. japonica HOM05D000372 ORTHO05D003436 2.7e-18 96.7 67 77.6
Zm00001eb389570 Zea mays HOM05D000372 ORTHO05D003436 1.4e-17 94.4 67 74.6
Psat1g043080 Pisum sativum HOM05D000372 ORTHO05D003436 1.8e-17 94.0 175 41.1
Hund25586 Selenicereus undatus HOM05D000372 ORTHO05D003436 1.5e-16 90.9 144 41.7
SalBow8G4869 Salvia bowleyana HOM05D000372 ORTHO05D003436 4.4e-16 89.4 259 33.6
Oeu008770.2 Olea europaea HOM05D000372 ORTHO05D003436 5.7e-16 89.0 71 66.2
Aa31LG3G16400 Aethionema arabicum HOM05D000372 ORTHO05D003436 9.7e-16 88.2 332 26.8
Pp3c1_9540 Physcomitrium patens HOM05D000372 ORTHO05D003436 2.8e-15 86.7 84 58.3
Pp3c2_36790 Physcomitrium patens HOM05D000372 ORTHO05D003436 4.8e-15 85.9 83 57.8
arahy.Tifrunner.gnm1.ann1.CV2UMV Arachis hypogaea HOM05D000372 ORTHO05D003436 1.4e-14 84.3 60 76.7
DCAR_003038 Daucus carota HOM05D000372 ORTHO05D003436 7.7e-13 78.6 67 64.2
CARHR155340 Cardamine hirsuta HOM05D000372 ORTHO05D003436 5.0e-12 75.9 67 61.2
BcaB03g12249 Brassica carinata HOM05D000372 ORTHO05D003436 2.5e-11 73.6 66 66.7
Nitab4.5_0000502g0160 Nicotiana tabacum HOM05D000372 ORTHO05D003436 2.5e-11 73.6 41 80.5
SGA_v2.0_scaffold121G33025 Striga asiatica HOM05D000372 ORTHO05D003436 3.2e-11 73.2 78 48.7
MSTRG.25803 Avicennia marina HOM05D000372 ORTHO05D003436 9.4e-11 71.6 41 80.5
Pp3c14_18760 Physcomitrium patens HOM05D000372 ORTHO05D003436 1.2e-10 71.2 68 55.9
Pp3c17_20830 Physcomitrium patens HOM05D000372 ORTHO05D003436 2.1e-10 70.5 68 55.9
Actinidia13069 Actinidia chinensis HOM05D000372 ORTHO05D003436 2.7e-10 70.1 41 75.6
Cpa.g.sc23.45 Carica papaya HOM05D000372 ORTHO05D003436 1.0e-09 68.2 39 74.4
CSS0031908 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 5.2e-09 65.9 51 66.7
Atru.chr7.2608 Acer truncatum HOM05D000372 ORTHO05D003436 1.2e-08 64.7 39 71.8
CAN.G295.4 Capsicum annuum HOM05D000399 ORTHO05D018858 4.4e-08 62.8 43 79.1
SEGI_09005 Sequoiadendron giganteum HOM05D000372 ORTHO05D003436 2.2e-07 60.5 229 27.5
AagrBONN_evm.TU.Sc2ySwM_368.409 Anthoceros agrestis HOM05D000372 ORTHO05D003436 8.2e-07 58.5 68 48.5
Mapoly0011s0086 Marchantia polymorpha HOM05D000372 ORTHO05D003436 1.1e-06 58.2 68 45.6
CSS0028082 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 1.4e-06 57.8 168 32.7
Psat7g070360 Pisum sativum HOM05D000372 ORTHO05D003436 2.4e-06 57.0 34 82.4


User provided reference genes

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