Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc23g0006020 Simmondsia chinensis HOM05D005642 ORTHO05D006672 6.3e-222 773.9 409 100.0
Hund03285 Selenicereus undatus HOM05D005642 ORTHO05D006672 1.7e-54 217.6 409 40.8
AUR62020612 Chenopodium quinoa HOM05D005642 ORTHO05D006672 1.9e-48 197.6 413 38.0
Hund19402 Selenicereus undatus HOM05D005642 ORTHO05D006672 4.2e-48 196.4 408 39.2
EL10Ac2g03740 Beta vulgaris HOM05D005642 ORTHO05D006672 9.3e-48 195.3 423 36.4
AUR62009051 Chenopodium quinoa HOM05D005642 ORTHO05D006672 2.1e-47 194.1 435 37.5
Dinv03494 Davidia involucrata HOM05D005642 ORTHO05D006672 4.6e-47 193.0 477 34.6
Ah.11g043760 Amaranthus hybridus HOM05D005642 ORTHO05D006672 1.1e-45 188.3 412 38.3
QL12p025051 Quercus lobata HOM05D005642 ORTHO05D006672 2.1e-44 184.1 461 36.4
Hma1.2p1_0379F.1_g139820 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 6.4e-41 172.6 447 34.2
Hma1.2p1_0379F.1_g139825 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 6.4e-41 172.6 447 34.2
Ciclev10007752m.g Citrus clementina HOM05D005642 ORTHO05D006672 1.9e-40 171.0 432 33.3
Cfa013263 Carpinus fangiana HOM05D005642 ORTHO05D006672 3.2e-40 170.2 495 33.1
Prupe.1G460900 Prunus persica HOM05D005642 ORTHO05D006672 1.9e-37 161.0 319 40.4
Duzib168G1720 Durio zibethinus HOM05D005642 ORTHO05D006672 3.3e-37 160.2 214 47.2
CiPaw.07G213400 Carya illinoinensis HOM05D005642 ORTHO05D006672 4.3e-37 159.8 495 32.9
Thecc.09G006400 Theobroma cacao HOM05D005642 ORTHO05D006672 5.6e-37 159.5 220 45.5
CSS0029793 Camellia sinensis var. sinensis HOM05D005642 ORTHO05D006672 1.6e-36 157.9 477 32.1
TWI63G0215 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 1.6e-36 157.9 427 36.1
Haze_21725 Corylus avellana HOM05D005642 ORTHO05D006672 3.7e-36 156.8 320 39.4
MD15G1108600 Malus domestica HOM05D005642 ORTHO05D006672 1.1e-35 155.2 354 35.9
Manes.03G003300 Manihot esculenta HOM05D005642 ORTHO05D006672 4.0e-35 153.3 456 32.9
GSVIVG01035528001 Vitis vinifera HOM05D005642 ORTHO05D006672 1.5e-34 151.4 207 48.3
TWI32G0776 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 5.8e-34 149.4 203 49.8
THA.LOC104803598 Tarenaya hassleriana HOM05D005642 ORTHO05D006672 7.6e-34 149.1 205 43.9
Gorai.001G001600 Gossypium raimondii HOM05D005642 ORTHO05D006672 1.0e-33 148.7 224 43.3
VMungo1309G0073 Vigna mungo HOM05D005642 ORTHO05D006672 2.2e-33 147.5 220 43.2
Gohir.D07G001900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 3.8e-33 146.7 224 42.9
FAN15G2732 Fragaria x ananassa HOM05D005642 ORTHO05D006672 7.1e-32 142.5 320 35.0
Gohir.A07G001500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 7.1e-32 142.5 413 32.2
FvH4_2g36900 Fragaria vesca HOM05D005642 ORTHO05D006672 1.2e-31 141.7 442 31.7
ClCG05G017540 Citrullus lanatus HOM05D005642 ORTHO05D006672 1.6e-31 141.4 201 45.3
arahy.Tifrunner.gnm1.ann1.KDL0BF Arachis hypogaea HOM05D005642 ORTHO05D006672 2.1e-31 141.0 245 38.0
Potri.018G006200 Populus trichocarpa HOM05D005642 ORTHO05D006672 4.6e-31 139.8 396 31.8
arahy.Tifrunner.gnm1.ann1.4FD105 Arachis hypogaea HOM05D005642 ORTHO05D006672 1.0e-30 138.7 278 35.3
Oeu019279.2 Olea europaea HOM05D005642 ORTHO05D006672 1.0e-30 138.7 457 31.9
CsaV3_3G047060 Cucumis sativus L. HOM05D005642 ORTHO05D006672 2.3e-30 137.5 387 33.1
RcHm_v2.0_Chr6g0304881 Rosa chinensis HOM05D005642 ORTHO05D006672 3.9e-30 136.7 462 32.7
TAR383G0661 Trochodendron aralioides HOM05D005642 ORTHO05D006672 3.9e-30 136.7 248 39.9
Sabra18G0014300 Salix brachista HOM05D005642 ORTHO05D006672 5.1e-30 136.3 380 32.9
COL.COLO4_19042 Corchorus olitorius HOM05D005642 ORTHO05D006672 1.9e-29 134.4 498 31.1
Glyma.06G075900 Glycine max HOM05D005642 ORTHO05D006672 1.9e-29 134.4 216 38.0
Lalb_Chr23g0269061 Lupinus albus HOM05D005642 ORTHO05D006672 2.5e-29 134.0 217 41.5
Sed0007069 Sechium edule HOM05D005642 ORTHO05D006672 3.3e-29 133.7 190 43.7
Potri.006G275200 Populus trichocarpa HOM05D005642 ORTHO05D006672 7.4e-29 132.5 205 41.5
Atru.chr7.2633 Acer truncatum HOM05D005642 ORTHO05D006672 1.6e-28 131.3 429 30.8
FAN20G1085 Fragaria x ananassa HOM05D005642 ORTHO05D006672 1.6e-28 131.3 468 31.8
FAN27G2209 Fragaria x ananassa HOM05D005642 ORTHO05D006672 4.8e-28 129.8 451 31.0
HanXRQChr17g0538601 Helianthus annuus HOM05D005642 ORTHO05D006672 1.4e-27 128.3 197 41.1
AT4G31430 Arabidopsis thaliana HOM05D005642 ORTHO05D006672 1.8e-27 127.9 295 35.9
Migut.E01422 Erythranthe guttata HOM05D005642 ORTHO05D006672 1.8e-27 127.9 379 31.9
Ca_15671_v3 Cicer arietinum L. HOM05D005642 ORTHO05D006672 2.4e-27 127.5 216 42.1
BcaC01g01089 Brassica carinata HOM05D005642 ORTHO05D006672 5.3e-27 126.3 416 30.8
C03p87980 Brassica napus HOM05D005642 ORTHO05D006672 5.3e-27 126.3 416 30.8
Sp7g29290 Schrenkiella parvula HOM05D005642 ORTHO05D006672 6.9e-27 125.9 317 33.8
Carub.0007s0913 Capsella rubella HOM05D005642 ORTHO05D006672 9.0e-27 125.6 262 37.0
BolC3t21109H Brassica oleracea HOM05D005642 ORTHO05D006672 1.2e-26 125.2 412 30.8
Glyma.04G074900 Glycine max HOM05D005642 ORTHO05D006672 1.2e-26 125.2 495 30.3
Phvul.009G100600 Phaseolus vulgaris HOM05D005642 ORTHO05D006672 1.2e-26 125.2 406 30.3
Lj1g0005947 Lotus japonicus HOM05D005642 ORTHO05D006672 1.5e-26 124.8 211 40.8
BraA08t33825Z Brassica rapa HOM05D005642 ORTHO05D006672 2.0e-26 124.4 265 36.2
Lalb_Chr11g0064111 Lupinus albus HOM05D005642 ORTHO05D006672 2.0e-26 124.4 215 40.5
Thhalv10024763m.g Eutrema salsugineum HOM05D005642 ORTHO05D006672 3.4e-26 123.6 306 34.3
Migut.A00441 Erythranthe guttata HOM05D005642 ORTHO05D006672 4.5e-26 123.2 444 29.3
Eucgr.C04006 Eucalyptus grandis HOM05D005642 ORTHO05D006672 4.5e-26 123.2 488 30.9
BolC1t00742H Brassica oleracea HOM05D005642 ORTHO05D006672 1.3e-25 121.7 195 41.0
Aa31LG2G18900 Aethionema arabicum HOM05D005642 ORTHO05D006672 1.7e-25 121.3 375 30.1
SalBow8G4661 Salvia bowleyana HOM05D005642 ORTHO05D006672 1.7e-25 121.3 195 42.1
Actinidia06420 Actinidia chinensis HOM05D005642 ORTHO05D006672 3.8e-25 120.2 417 30.0
MD08G1130500 Malus domestica HOM05D005642 ORTHO05D006672 5.0e-25 119.8 179 43.6
Medtr3g108780 Medicago truncatula HOM05D005642 ORTHO05D006672 5.0e-25 119.8 486 28.6
MSTRG.25774 Avicennia marina HOM05D005642 ORTHO05D006672 6.5e-25 119.4 457 30.2
Psat5g024120 Pisum sativum HOM05D005642 ORTHO05D006672 6.5e-25 119.4 396 30.6
ECA246G0678 Erigeron canadensis HOM05D005642 ORTHO05D006672 8.4e-25 119.0 333 30.9
BcaC09g51922 Brassica carinata HOM05D005642 ORTHO05D006672 1.4e-24 118.2 440 31.4
A08p18620 Brassica napus HOM05D005642 ORTHO05D006672 1.4e-24 118.2 447 30.4
C01p07620 Brassica napus HOM05D005642 ORTHO05D006672 1.4e-24 118.2 440 31.4
CARHR239310 Cardamine hirsuta HOM05D005642 ORTHO05D006672 1.9e-24 117.9 262 35.5
CANSAT78G0024 Cannabis sativa HOM05D005642 ORTHO05D006672 2.5e-24 117.5 388 33.8
BcaB03g12695 Brassica carinata HOM05D005642 ORTHO05D006672 3.2e-24 117.1 262 34.4
A01p06850 Brassica napus HOM05D005642 ORTHO05D006672 4.2e-24 116.7 430 30.0
PGR044G2675 Punica granatum HOM05D005642 ORTHO05D006672 1.6e-23 114.8 487 29.4
DCAR_004570 Daucus carota HOM05D005642 ORTHO05D006672 2.1e-23 114.4 453 30.9
Peaxi162Scf00045g01740 Petunia axillaris HOM05D005642 ORTHO05D006672 2.1e-23 114.4 431 30.4
SGA_v2.0_scaffold27G11668 Striga asiatica HOM05D005642 ORTHO05D006672 2.1e-23 114.4 414 31.4
AL7G20630 Arabidopsis lyrata HOM05D005642 ORTHO05D006672 3.5e-23 113.6 398 30.4
Cc11_g04340 Coffea canephora HOM05D005642 ORTHO05D006672 4.6e-23 113.2 461 29.9
Lsat_1_v5_gn_3_25461 Lactuca sativa HOM05D005642 ORTHO05D006672 1.3e-22 111.7 234 36.3
PSO170G3270 Papaver somniferum HOM05D005642 ORTHO05D006672 1.3e-22 111.7 445 30.6
Solyc08g006480.3 Solanum lycopersicum HOM05D005642 ORTHO05D006672 3.0e-22 110.5 395 29.6
BcaNung04578 Brassica carinata HOM05D005642 ORTHO05D006672 5.1e-22 109.8 359 32.3
Gohir.D05G067500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 5.1e-22 109.8 257 35.0
CAN.G673.14 Capsicum annuum HOM05D005642 ORTHO05D006672 6.7e-22 109.4 432 29.2
BcaNung04589 Brassica carinata HOM05D005642 ORTHO05D006672 8.7e-22 109.0 418 30.6
SHI21128 Sapria himalayana HOM05D005642 ORTHO05D006672 1.5e-21 108.2 166 39.8
Sopen08g002430 Solanum pennellii HOM05D005642 ORTHO05D006672 1.5e-21 108.2 353 30.9
Gorai.009G068300 Gossypium raimondii HOM05D005642 ORTHO05D006672 2.5e-21 107.5 257 34.2
PSO063G4833 Papaver somniferum HOM05D005642 ORTHO05D006672 4.3e-21 106.7 452 30.8
BraA01t00636Z Brassica rapa HOM05D005642 ORTHO05D006672 7.4e-21 105.9 459 28.5
Nn8g40457 Nelumbo nucifera HOM05D005642 ORTHO05D006672 7.4e-21 105.9 275 32.7
MBI16_g31790_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 9.7e-21 105.5 265 32.5
MELO3C003630.2 Cucumis melo HOM05D005642 ORTHO05D006672 2.2e-20 104.4 156 42.3
Gohir.A05G064900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 4.8e-20 103.2 490 28.8
Sabra06G0213000 Salix brachista HOM05D005642 ORTHO05D006672 4.8e-20 103.2 245 34.3
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 4.5e-18 96.7 244 30.7
vmacro00200 Vaccinium macrocarpon HOM05D005642 ORTHO05D006672 4.5e-18 96.7 555 25.6
CDE07G1180 Ceratophyllum demersum HOM05D005642 ORTHO05D006672 7.7e-18 95.9 249 30.5
MBI14_g08146_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 1.0e-17 95.5 364 29.9
Cpa.g.sc23.5 Carica papaya HOM05D005642 ORTHO05D006672 1.6e-15 88.2 135 42.2
Oeu014127.1 Olea europaea HOM05D005642 ORTHO05D006672 1.0e-14 85.5 148 39.9
Aqoxy7G02962 Aquilegia oxysepala HOM05D005642 ORTHO05D006672 2.0e-13 81.3 462 27.5
Nitab4.5_0000555g0260 Nicotiana tabacum HOM05D005642 ORTHO05D006672 2.2e-12 77.8 367 27.2
Nitab4.5_0004131g0010 Nicotiana tabacum HOM05D005642 ORTHO05D006672 5.3e-11 73.2 428 27.1
Zm00001eb432470 Zea mays HOM05D005642 ORTHO05D006672 2.0e-10 71.2 222 28.8
SalBow4G3316 Salvia bowleyana HOM05D005642 ORTHO05D006672 6.5e-09 66.2 240 29.6
HPP92_015370 Vanilla planifolia HOM05D005642 ORTHO05D006672 1.1e-08 65.5 196 26.5
Zm00001eb067810 Zea mays HOM05D005642 ORTHO05D006672 6.1e-07 59.7 485 25.6
Lsat_1_v5_gn_5_61101 Lactuca sativa HOM05D005642 ORTHO05D006672 7.9e-07 59.3 184 29.3
Oeu048000.1 Olea europaea HOM05D005642 ORTHO05D006672 7.9e-07 59.3 193 29.5
arahy.Tifrunner.gnm1.ann1.GW4HJP Arachis hypogaea HOM05D000013 ORTHO05D021469 1.4e-06 58.5 134 30.6
HanXRQChr13g0412371 Helianthus annuus HOM05D005642 ORTHO05D006672 1.8e-06 58.2 100 41.0


User provided reference genes

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