Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc23g0004750 Simmondsia chinensis HOM05D007885 ORTHO05D010052 7.8e-37 156.8 87 100.0
Dinv43531 Davidia involucrata HOM05D007885 ORTHO05D010052 1.2e-18 96.3 88 60.2
Dinv43976 Davidia involucrata HOM05D007885 ORTHO05D010052 8.1e-18 93.6 71 67.6
QL04p052580 Quercus lobata HOM05D007885 ORTHO05D010052 8.1e-18 93.6 61 75.4
GSVIVG01011323001 Vitis vinifera HOM05D007885 ORTHO05D010052 1.4e-17 92.8 84 59.5
Rhsim07G0045900 Rhododendron simsii HOM05D007885 ORTHO05D010052 2.4e-17 92.0 82 59.8
TWI34G1949 Tripterygium wilfordii HOM05D007885 ORTHO05D010052 3.1e-17 91.7 87 57.5
AUR62038019 Chenopodium quinoa HOM05D007885 ORTHO05D010052 5.2e-17 90.9 80 63.8
Thecc.05G232100 Theobroma cacao HOM05D007885 ORTHO05D010052 5.2e-17 90.9 72 63.9
Hma1.2p1_0353F.1_g133360 Hydrangea macrophylla HOM05D007885 ORTHO05D010052 6.8e-17 90.5 74 60.8
Lsat_1_v5_gn_3_26720 Lactuca sativa HOM05D007885 ORTHO05D010052 6.8e-17 90.5 69 63.8
TAR629G0995 Trochodendron aralioides HOM05D007885 ORTHO05D010052 1.2e-16 89.7 85 57.6
Gohir.D13G100200 Gossypium hirsutum HOM05D007885 ORTHO05D010052 1.5e-16 89.4 74 60.8
CAN.G138.10 Capsicum annuum HOM05D007885 ORTHO05D010052 2.0e-16 89.0 66 62.1
Gorai.013G112400 Gossypium raimondii HOM05D007885 ORTHO05D010052 2.6e-16 88.6 75 60.0
Psat1g169600 Pisum sativum HOM05D007885 ORTHO05D010052 4.4e-16 87.8 61 70.5
Duzib177G0659 Durio zibethinus HOM05D007885 ORTHO05D010052 9.9e-16 86.7 72 59.7
Sed0017556 Sechium edule HOM05D007885 ORTHO05D010052 9.9e-16 86.7 76 56.6
Actinidia05823 Actinidia chinensis HOM05D007885 ORTHO05D010052 1.7e-15 85.9 71 63.4
Ah.05g177170 Amaranthus hybridus HOM05D007885 ORTHO05D010052 3.8e-15 84.7 84 60.7
Gohir.A13G081900 Gossypium hirsutum HOM05D007885 ORTHO05D010052 3.8e-15 84.7 75 58.7
Lj6g0000644 Lotus japonicus HOM05D007885 ORTHO05D010052 3.8e-15 84.7 80 57.5
Medtr2g029000 Medicago truncatula HOM05D007885 ORTHO05D010052 3.8e-15 84.7 61 67.2
Sopen08g013480 Solanum pennellii HOM05D007885 ORTHO05D010052 4.9e-15 84.3 66 57.6
Ciclev10033227m.g Citrus clementina HOM05D007885 ORTHO05D010052 6.4e-15 84.0 81 61.7
HanXRQChr15g0465371 Helianthus annuus HOM05D007885 ORTHO05D010052 1.1e-14 83.2 63 60.3
Solyc08g044345.1 Solanum lycopersicum HOM05D007885 ORTHO05D010052 1.4e-14 82.8 80 56.2
CsaV3_2G010950 Cucumis sativus L. HOM05D007885 ORTHO05D010052 2.4e-14 82.0 76 53.9
ECA246G2713 Erigeron canadensis HOM05D007885 ORTHO05D010052 3.2e-14 81.6 68 58.8
Manes.08G157500 Manihot esculenta HOM05D007885 ORTHO05D010052 3.2e-14 81.6 77 55.8
Potri.013G072700 Populus trichocarpa HOM05D007885 ORTHO05D010052 3.2e-14 81.6 68 60.3
MELO3C020379.2 Cucumis melo HOM05D007885 ORTHO05D010052 5.4e-14 80.9 76 52.6
Migut.B01442 Erythranthe guttata HOM05D007885 ORTHO05D010052 1.6e-13 79.3 69 58.0
CDE02G4204 Ceratophyllum demersum HOM05D007885 ORTHO05D010052 2.1e-13 79.0 78 56.4
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 2.1e-13 79.0 70 52.9
FvH4_7g07270 Fragaria vesca HOM05D007885 ORTHO05D010052 2.7e-13 78.6 61 62.3
Lalb_Chr18g0057781 Lupinus albus HOM05D007885 ORTHO05D010052 4.6e-13 77.8 57 63.2
Nn1g02087 Nelumbo nucifera HOM05D007885 ORTHO05D010052 4.6e-13 77.8 57 68.4
Aqoxy3G02001 Aquilegia oxysepala HOM05D007885 ORTHO05D010052 6.0e-13 77.4 64 57.8
MD07G1078800 Malus domestica HOM05D007885 ORTHO05D010052 6.0e-13 77.4 92 50.0
ClCG06G008190 Citrullus lanatus HOM05D007885 ORTHO05D010052 7.8e-13 77.0 82 50.0
Glyma.15G127300 Glycine max HOM05D007885 ORTHO05D010052 7.8e-13 77.0 75 53.3
TPR.G17523 Trifolium pratense HOM05D007885 ORTHO05D010052 7.8e-13 77.0 60 60.0
Phvul.006G131300 Phaseolus vulgaris HOM05D007885 ORTHO05D010052 1.7e-12 75.9 85 54.1
Oeu026138.2 Olea europaea HOM05D007885 ORTHO05D010052 3.0e-12 75.1 57 63.2
arahy.Tifrunner.gnm1.ann1.4X2HTN Arachis hypogaea HOM05D007885 ORTHO05D010052 1.9e-11 72.4 70 51.4
Cc02_g26380 Coffea canephora HOM05D007885 ORTHO05D010052 2.5e-11 72.0 55 63.6
Lj7A558G43 Lonicera japonica HOM05D007885 ORTHO05D010052 2.5e-11 72.0 93 50.5
PGSC0003DMG400025196 Solanum tuberosum HOM05D007885 ORTHO05D010052 4.3e-11 71.2 54 59.3
Sabra13G0062600 Salix brachista HOM05D007885 ORTHO05D010052 5.6e-11 70.9 57 63.2
Peaxi162Scf01343g00147 Petunia axillaris HOM05D007885 ORTHO05D010052 1.6e-10 69.3 62 61.3
CANSAT01G2257 Cannabis sativa HOM05D007885 ORTHO05D010052 2.8e-10 68.6 65 50.8
Eucgr.E01767 Eucalyptus grandis HOM05D007885 ORTHO05D010052 2.8e-10 68.6 50 66.0
Zm00001eb306480 Zea mays HOM05D007885 ORTHO05D010052 4.8e-10 67.8 77 44.2
HPP92_008354 Vanilla planifolia HOM05D007885 ORTHO05D010052 6.2e-10 67.4 80 48.8
AT1G49245 Arabidopsis thaliana HOM05D007885 ORTHO05D010052 2.4e-09 65.5 70 45.7
RcHm_v2.0_Chr1g0337851 Rosa chinensis HOM05D007885 ORTHO05D010052 5.3e-09 64.3 71 56.3
Sp1g36130 Schrenkiella parvula HOM05D007885 ORTHO05D010052 5.3e-09 64.3 76 44.7
RcHm_v2.0_Chr0c29g0501081 Rosa chinensis HOM05D007885 ORTHO05D010052 6.9e-09 63.9 70 57.1
vmacro13585 Vaccinium macrocarpon HOM05D007885 ORTHO05D010052 1.2e-08 63.2 120 40.0
FAN01G2012 Fragaria x ananassa HOM05D007885 ORTHO05D010052 1.5e-08 62.8 46 65.2
AL1G56120 Arabidopsis lyrata HOM05D007885 ORTHO05D010052 2.0e-08 62.4 70 44.3
AL4G25080 Arabidopsis lyrata HOM05D007885 ORTHO05D010052 2.0e-08 62.4 70 44.3
FvH4_7g07330 Fragaria vesca HOM05D007885 ORTHO05D010052 2.0e-08 62.4 45 64.4
Aa31LG9G17960 Aethionema arabicum HOM05D007885 ORTHO05D010052 3.4e-08 61.6 81 43.2
Carub.0001s3844 Capsella rubella HOM05D007885 ORTHO05D010052 5.8e-08 60.8 72 45.8
A08p04120 Brassica napus HOM05D007885 ORTHO05D010052 1.3e-07 59.7 70 44.3
BraA08t32437Z Brassica rapa HOM05D007885 ORTHO05D010052 1.3e-07 59.7 70 44.3
PSO782G0684 Papaver somniferum HOM05D007885 ORTHO05D010052 3.8e-07 58.2 57 38.6
C08p04310 Brassica napus HOM05D007885 ORTHO05D010052 4.9e-07 57.8 70 41.4
PSO063G1811 Papaver somniferum HOM05D007885 ORTHO05D010052 4.9e-07 57.8 57 38.6
BcaC07g37071 Brassica carinata HOM05D007885 ORTHO05D010052 1.4e-06 56.2 75 41.3
CARHR039250 Cardamine hirsuta HOM05D007885 ORTHO05D010052 3.2e-06 55.1 70 42.9


User provided reference genes

Program Settings