Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc23g0004620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-38 162.9 82 100.0
Sc16g0005360 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-22 109.4 77 70.1
Sc11g0005100 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.8e-22 109.0 77 75.3
Sc04g0003750 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-19 99.4 77 62.3
Sc23g0004070 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-18 95.9 78 62.8
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.8e-17 91.3 76 61.8
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.9e-17 90.9 74 58.1
Sc25g0003910 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-16 89.7 74 62.2
Sc01g0005690 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.1e-15 85.5 78 56.4
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.6e-15 84.3 76 59.2
Sc13g0005400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.0e-15 84.0 74 58.1
Sc10g0006460 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-14 82.8 78 52.6
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-14 82.8 69 60.9
Sc06g0004260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.8e-14 82.4 73 57.5
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.8e-14 82.4 78 53.8
Sc20g0002870 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.0e-14 81.6 73 53.4
Sc26g0003190 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.9e-14 81.3 78 52.6
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.1e-14 80.9 74 54.1
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-13 79.7 74 52.7
Sc16g0006020 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-13 79.3 69 60.9
Sc08g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.7e-13 77.4 74 52.7
Sc17g0003640 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.4e-13 77.0 66 57.6
Sc19g0006270 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.4e-13 77.0 78 50.0
Sc19g0006300 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.4e-13 77.0 69 55.1
Sc24g0000790 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.4e-13 77.0 61 63.9
Sc01g0002780 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.6e-13 76.6 70 54.3
Sc07g0006510 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.6e-13 76.6 72 55.6
Sc06g0006000 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-12 76.3 74 47.3
Sc23g0003820 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.7e-12 74.7 78 48.7
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.8e-12 74.3 64 59.4
Sc05g0005650 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-11 73.2 74 54.1
Sc26g0002220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-11 73.2 55 63.6
Sc09g0006390 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-10 69.3 71 53.5
Sc04g0003720 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.6e-10 68.6 53 64.2
Sc12g0005980 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-09 65.9 61 55.7
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.4e-08 62.8 68 44.1
Sc01g0004870 Simmondsia chinensis HOM05D009209 ORTHO05D009629 3.2e-08 61.6 65 44.6
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.5e-07 58.2 68 39.7
Sc20g0002080 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.6e-07 57.8 50 62.0
Sc20g0003570 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.6e-07 57.8 83 37.3
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.1e-07 57.4 71 31.0
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 6.1e-07 57.4 72 34.7
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 1.0e-06 56.6 69 34.8
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-06 56.2 71 38.0
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 2.3e-06 55.5 69 36.2
Sc10g0004010 Simmondsia chinensis HOM05D031748 ORTHO05D011057 3.9e-06 54.7 68 42.6
Ah.07g196620 Amaranthus hybridus HOM05D008762 ORTHO05D031041 6.7e-06 53.9 70 34.3
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.7e-06 53.9 75 34.7
Sc22g0002690 Simmondsia chinensis HOM05D000043 ORTHO05D030613 8.7e-06 53.5 71 39.4


User provided reference genes

Program Settings