Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc23g0004070 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.8e-63 244.6 116 100.0
Sc01g0005690 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.8e-42 175.3 112 76.8
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.0e-36 155.2 115 66.1
Sc07g0006510 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.3e-34 147.5 116 64.7
Sc10g0006460 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.1e-33 144.8 113 59.3
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-32 142.9 87 77.0
Sc13g0005400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.8e-31 138.3 115 58.3
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.0e-31 137.9 82 79.3
Sc05g0005650 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-30 136.7 89 69.7
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-30 136.3 109 61.5
Sc09g0006390 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.5e-30 135.6 108 58.3
Sc19g0006300 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.2e-28 127.9 108 56.5
Sc23g0003820 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.7e-28 127.5 100 59.0
Sc08g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-27 126.3 74 75.7
Sc25g0003910 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.3e-27 125.2 74 78.4
Sc26g0003190 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.4e-27 124.0 110 55.5
Sc06g0004260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-26 123.2 89 66.3
Sc16g0005360 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.8e-26 121.3 101 57.4
Sc19g0006270 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.8e-26 121.3 85 64.7
Sc17g0003640 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.6e-24 116.3 76 75.0
Sc24g0000790 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-23 112.5 70 77.1
Sc20g0002870 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.2e-22 107.5 106 50.9
Sc16g0006020 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.7e-21 104.8 70 68.6
Sc04g0003750 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-20 103.6 81 61.7
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.0e-20 101.7 99 49.5
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.2e-20 101.3 88 51.1
Sc11g0005100 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.2e-20 101.3 107 51.4
Sc06g0006000 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.0e-19 99.4 84 52.4
Sc23g0004620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.6e-19 99.0 78 62.8
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-17 93.6 105 46.7
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.7e-16 89.0 105 46.7
Sc01g0002780 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-15 87.0 82 51.2
Sc26g0002220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-14 83.6 54 70.4
Sc12g0005980 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-12 76.6 63 58.7
Sc20g0003570 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.6e-11 72.4 40 77.5
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 6.3e-10 67.8 80 37.5
Sc04g0003720 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-09 67.0 49 65.3
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 5.4e-09 64.7 87 35.6
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 5.4e-09 64.7 81 38.3
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 7.0e-09 64.3 82 37.8
Sc07g0006130 Simmondsia chinensis HOM05D009209 ORTHO05D009629 1.6e-08 63.2 80 37.5
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.0e-08 62.8 81 33.3
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 2.7e-08 62.4 75 36.0
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 5.9e-08 61.2 84 32.1
Ah.02g118210 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.7e-08 60.8 80 32.5
Ah.07g201540 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.7e-08 60.8 76 35.5
Sc11g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-07 60.5 71 43.7
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.0e-07 60.5 81 37.0
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-07 60.1 85 36.5
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.3e-07 59.3 80 32.5
Ah.13g066110 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.3e-07 59.3 81 29.6
Ah.08g221330 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.9e-07 58.9 95 33.7
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 5.0e-07 58.2 76 34.2
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.0e-07 58.2 81 35.8
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 8.6e-07 57.4 113 31.9
Lj5g0026451 Lotus japonicus HOM05D008220 ORTHO05D010358 8.6e-07 57.4 79 36.7
CARHR193960 Cardamine hirsuta HOM05D000428 ORTHO05D000124 1.1e-06 57.0 64 37.5
Ah.12g063050 Amaranthus hybridus HOM05D000030 ORTHO05D000009 1.5e-06 56.6 80 33.8
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 1.5e-06 56.6 102 31.4
Thhalv10014796m.g Eutrema salsugineum HOM05D001197 ORTHO05D000124 1.5e-06 56.6 68 35.3
Ah.07g196620 Amaranthus hybridus HOM05D008762 ORTHO05D031041 1.9e-06 56.2 87 28.7
Sc01g0004870 Simmondsia chinensis HOM05D009209 ORTHO05D009629 1.9e-06 56.2 63 41.3
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.5e-06 55.8 106 32.1
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 2.5e-06 55.8 86 32.6
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.5e-06 55.8 77 32.5
Sp6g25350 Schrenkiella parvula HOM05D001197 ORTHO05D000124 2.5e-06 55.8 83 34.9
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.3e-06 55.5 86 34.9
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 3.3e-06 55.5 78 34.6
LjContig00357g0008125 Lotus japonicus HOM05D008220 ORTHO05D010358 3.3e-06 55.5 86 30.2
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.2e-06 55.1 80 31.2
Sc01g0000330 Simmondsia chinensis HOM05D009348 ORTHO05D010856 7.2e-06 54.3 80 37.5
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 9.5e-06 53.9 72 34.7
Ah.10g026880 Amaranthus hybridus HOM05D008762 ORTHO05D011252 9.5e-06 53.9 70 35.7


User provided reference genes

Program Settings