Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 0.0e+00 1221.1 674 100.0
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 4.2e-247 858.2 678 68.3
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 1.4e-234 816.6 678 68.1
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 5.0e-232 808.1 678 65.2
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 6.5e-232 807.7 677 66.9
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 9.4e-231 803.9 674 65.3
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 2.1e-230 802.7 675 66.5
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 6.1e-230 801.2 675 66.4
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 6.1e-230 801.2 683 65.7
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 8.8e-229 797.3 677 65.9
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 3.7e-227 792.0 677 63.5
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 6.3e-227 791.2 676 63.5
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 8.2e-227 790.8 672 64.1
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 5.3e-226 788.1 677 63.7
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 2.2e-224 782.7 670 65.4
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 8.5e-224 780.8 664 66.4
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 1.1e-223 780.4 676 63.0
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 1.9e-223 779.6 677 64.7
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 2.5e-223 779.2 679 64.8
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 4.2e-223 778.5 683 62.4
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 3.6e-222 775.4 676 62.7
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.0e-221 773.9 681 64.8
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 7.5e-220 767.7 680 63.8
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 2.2e-219 766.1 676 62.1
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 3.7e-219 765.4 679 61.1
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 4.8e-219 765.0 681 61.7
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 3.1e-218 762.3 676 62.1
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 1.2e-217 760.4 706 60.2
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 4.5e-217 758.4 675 61.0
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 8.5e-216 754.2 678 61.2
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.1e-215 753.8 675 60.1
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 1.9e-215 753.1 674 60.7
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 2.5e-215 752.7 670 63.9
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 3.2e-215 752.3 679 61.3
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 4.2e-215 751.9 679 64.1
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 2.1e-214 749.6 688 60.2
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 3.6e-214 748.8 673 60.0
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 2.3e-213 746.1 677 61.7
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 3.0e-213 745.7 674 61.3
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 4.0e-213 745.3 668 60.5
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 5.2e-213 745.0 679 61.6
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 8.8e-213 744.2 677 60.9
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 8.8e-213 744.2 704 59.2
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 2.6e-212 742.7 672 60.9
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 9.8e-212 740.7 672 60.7
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 1.2e-209 733.8 668 59.1
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 2.0e-209 733.0 677 60.6
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 2.7e-209 732.6 686 59.9
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 5.9e-209 731.5 672 60.1
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.5e-207 726.1 680 60.0
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 7.2e-207 724.5 698 58.5
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 2.1e-206 723.0 680 59.6
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 4.7e-206 721.8 683 59.2
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 1.4e-205 720.3 674 58.8
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.3e-205 719.5 682 59.8
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.3e-205 719.5 682 59.8
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 4.0e-205 718.8 670 60.7
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 6.8e-205 718.0 675 58.2
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.8e-203 712.6 689 59.2
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 2.8e-203 712.6 680 58.2
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 1.4e-202 710.3 679 56.7
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.8e-202 709.9 669 61.0
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 1.6e-201 706.8 689 58.9
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 2.8e-198 696.0 678 61.1
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 4.7e-198 695.3 679 56.1
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 6.1e-198 694.9 659 59.2
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 3.0e-197 692.6 681 56.1
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 4.0e-197 692.2 678 57.7
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 6.8e-197 691.4 676 57.7
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 1.2e-196 690.6 677 59.4
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 8.3e-195 684.5 606 64.5
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 4.1e-194 682.2 679 58.9
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 5.4e-194 681.8 669 58.3
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 5.4e-194 681.8 669 60.1
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 7.3e-191 671.4 660 59.7
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 1.5e-188 663.7 671 56.3
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 2.0e-188 663.3 677 56.3
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 9.8e-188 661.0 679 57.9
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 2.2e-187 659.8 678 56.0
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 8.3e-187 657.9 686 55.0
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 2.1e-185 653.3 687 55.6
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 3.5e-185 652.5 675 55.1
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 6.0e-185 651.7 627 57.9
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 8.6e-184 647.9 665 57.3
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 1.5e-183 647.1 698 53.6
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 4.3e-183 645.6 696 54.7
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 4.0e-181 639.0 675 52.9
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 2.6e-180 636.3 695 53.4
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 5.4e-178 628.6 691 53.4
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 7.1e-178 628.2 686 53.5
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 1.2e-177 627.5 692 52.9
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 2.1e-177 626.7 672 53.3
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 1.5e-175 620.5 686 52.8
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 7.3e-175 618.2 683 51.7
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 1.4e-173 614.0 681 53.9
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 3.4e-172 609.4 681 53.6
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 2.9e-171 606.3 680 54.6
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 3.5e-169 599.4 469 68.7
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 9.0e-165 584.7 646 53.9
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.6e-137 494.2 699 45.1
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 1.4e-130 471.1 631 46.4
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 3.6e-129 466.5 685 41.5
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 1.5e-127 461.1 704 40.3
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 4.3e-127 459.5 680 45.0
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 1.3e-126 458.0 572 48.4
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 1.8e-120 437.6 365 66.6
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 5.5e-114 416.0 674 39.3
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 1.6e-113 414.5 308 73.1
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 2.7e-100 370.5 311 64.6
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 3.6e-97 360.1 333 56.8
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 5.7e-95 352.8 347 55.6
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 2.7e-76 290.8 251 61.8
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 1.1e-74 285.4 617 32.6
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 2.8e-57 227.6 259 51.0
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 9.3e-45 186.0 326 40.5
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 5.1e-43 180.3 264 44.3
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 2.1e-41 174.9 221 43.0
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 1.1e-26 125.9 358 31.0
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 4.3e-18 97.4 182 35.2
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 2.9e-14 84.7 87 51.7
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 5.7e-10 70.5 230 29.6
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.7e-06 58.9 121 36.4


User provided reference genes

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