Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc23g0001700 Simmondsia chinensis HOM05D028926 ORTHO05D005331 9.8e-144 513.5 261 100.0
Sc24g0001110 Simmondsia chinensis HOM05D028926 ORTHO05D005331 2.5e-115 419.1 236 91.1
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 3.7e-34 149.4 236 42.8
Sc05g0007460 Simmondsia chinensis HOM05D028926 ORTHO05D005331 8.1e-21 105.1 289 35.6
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 4.6e-16 89.4 278 33.1
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 2.5e-14 83.6 259 34.7
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 3.4e-11 73.2 167 37.7
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 5.8e-11 72.4 272 29.4
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 5.8e-11 72.4 272 29.4
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 2.2e-10 70.5 285 31.6
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 4.6e-08 62.8 231 32.0
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 4.6e-08 62.8 289 30.4
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 6.0e-08 62.4 269 28.6
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 6.0e-08 62.4 242 32.2
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 6.0e-08 62.4 233 33.0
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 1.0e-07 61.6 271 28.8
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 1.0e-07 61.6 192 34.9
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 1.3e-07 61.2 166 33.7
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.7e-07 60.8 246 31.7
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.7e-07 60.8 224 30.8
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 3.0e-07 60.1 182 34.6
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 3.9e-07 59.7 144 34.7
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 3.9e-07 59.7 106 39.6
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 6.6e-07 58.9 243 30.5
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 8.6e-07 58.5 154 35.7
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 8.6e-07 58.5 180 31.7
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 1.5e-06 57.8 298 28.5
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 3.3e-06 56.6 287 28.2
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 3.3e-06 56.6 108 41.7
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 3.3e-06 56.6 108 41.7
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 3.3e-06 56.6 197 33.0
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 4.3e-06 56.2 308 27.3
Rhsim13G0180200 Rhododendron simsii HOM05D007160 ORTHO05D005331 4.3e-06 56.2 143 35.0


User provided reference genes

Program Settings